FC931207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.074e-49 Identity = 101/219 (46.12%), Postives = 143/219 (65.30%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP--QWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 L + + + G+ IL F TP + K W DEEF+R+ LAG+NP I + E+P KS LDPE+YG S IT E IE ++ G+ +++EAI KLFIL++HD+ +PY+ ++ + T Y SRT+ FL G+L+P+AIEL+ P +G +V+ PS E +W+LAKA+V +D+G HQL+SHWL TH EP+VIATNRQLSV+HPI+ Sbjct: 331 LEMIRELLRTDGEGILRFPTPLVIKDSKTAWRTDEEFAREMLAGVNPVIISRLEEFPPKSKLDPELYGNQNSTITAEHIEGKLDGL-TIDEAINSNKLFILNHHDVLIPYLRRINTTTTKT-YASRTLLFLQDNGSLKPLAIELSLPHPDGDQFGVTSKVYTPSDQGVEGSIWQLAKAYVAVNDSGVHQLISHWLNTHAVIEPFVIATNRQLSVLHPIH 547
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.880e-49 Identity = 102/237 (43.04%), Postives = 146/237 (61.60%), Query Frame = 1 Query: 4 GVNLPP-PKQEGFWNTLLPRLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP--QWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 G+ LP P + + + ++K I T G +L + TP+ + DK W DEEF R+ LAG NP I + E+P KS LDP IYG S ITTE ++ ++ G+ +V EAIK +LFIL++HD+ +P + K+ +T Y SRT+ FL TL+P+AIEL+ P +G +V+ P+ E +W+ AKA+V +D G HQL+SHWL TH EP+V+ATNR LSV+HPI+ Sbjct: 312 GIKLPEGPWLKAITDNISSEILKDILQTDGQGLLKYPTPQVIQGDKTAWRTDEEFGREMLAGSNPVLISRLQEFPPKSKLDPTIYGNQNSTITTEHVQDKLNGL-TVNEAIKSNRLFILNHHDIVMPLLRKINMSANTKAYASRTLLFLQDDRTLKPLAIELSLPHPDGDQFGTVSKVYTPADQGVEGSIWQFAKAYVAVNDMGIHQLISHWLNTHAVIEPFVVATNRHLSVLHPIH 547
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX1_SOLTU (Lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.344e-48 Identity = 101/219 (46.12%), Postives = 140/219 (63.93%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP--QWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 L + + + G+ IL F TP + K W DEEF+R+ LAG+NP I + E+P KS LDPE YG S IT E IE ++ G+ +V+EA+ KLFIL++HD+ +PY+ ++ T Y SRT+ FL G+L+P+AIEL+ P +G +V+ PS E +W+LAKA+V +D G HQL+SHWL TH EP+VIATNRQLSV+HPI+ Sbjct: 332 LEMIRELLRTDGEGILRFPTPLVIKDSKTAWRTDEEFAREMLAGVNPVIISRLQEFPPKSKLDPEAYGNQNSTITAEHIEDKLDGL-TVDEAMNNNKLFILNHHDVIIPYLRRINTT-ITKAYASRTLLFLQDNGSLKPLAIELSFPHPDGDQFGVTSKVYTPSDQGVESSIWQLAKAYVAVNDVGVHQLISHWLNTHAVIEPFVIATNRQLSVLHPIH 548
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.994e-48 Identity = 97/219 (44.29%), Postives = 138/219 (63.01%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 LP + + G+ +L F P + K W DEEF+R+ +AG+NP IR + E+P KS LDP IYG S IT + ++ + +V+EA+ ++LF+LDYHD+F+PY+ ++ Q + Y +RTI FL GTL+P+AIEL+ P G QV LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP++IATNR LS +HPIY Sbjct: 339 LPVVKELFRTDGEQVLKFPPPHVIQVSKSAWMTDEEFAREMVAGVNPCVIRGLQEFPPKSNLDPTIYGEQTSKITADALDLD---GYTVDEALASRRLFMLDYHDVFMPYIRRINQTYAKA-YATRTILFLRENGTLKPVAIELSLPHPAGDLSGAVSQVILPAKEGVESTIWLLAKAYVVVNDSCYHQLMSHWLNTHAVIEPFIIATNRHLSALHPIY 553
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 2.994e-48 Identity = 96/209 (45.93%), Postives = 138/209 (66.03%), Query Frame = 1 Query: 85 GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNG--KPQWKQVFLP-SWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 GD++L P + +K W DEEF+R+ LAG+NP I +TE+P KS+LDP +G S IT E IEK + G+ +V++A++ +L+ILD+HD F+P++ V L +Y +RT+FFL G L P+AIEL+ P + G +V+ P S E W+W+LAKA+V +D+G+HQLVSHWL TH EP+VI+TNR LSV HP++ Sbjct: 336 GDSLLKLPVPHIIQENKQAWRTDEEFAREVLAGVNPVMITRLTEFPPKSSLDPSKFGDHTSTITAEHIEKNLEGL-TVQQALESNRLYILDHHDRFMPFLIDVNNLPGNFIYATRTLFFLRGDGRLTPLAIELSEPIIQGGLTTAKSKVYTPVPSGSVEGWVWELAKAYVAVNDSGWHQLVSHWLNTHAVMEPFVISTNRHLSVTHPVH 543
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.486e-47 Identity = 106/238 (44.54%), Postives = 146/238 (61.34%), Query Frame = 1 Query: 1 EGVNLPPPK--QEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP--QWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 EG++LP N L L + G L F P+ + DK W DEEF+R+ LAGLNP I+L+ E+P KS LD E YG S IT IE + G+ +VEEA+++++LFILD+HD +PY+ +V + T Y SRT+ FL GTL+P+ IEL+ P NG +V+ P + LW+LAKA V +D+G HQL+SHW++TH EP+VIATNRQLSV+HP++ Sbjct: 311 EGIDLPNQALIDSIVKNIPLEMLKEIFRTDGQKFLKFPVPQVIKEDKTAWRTDEEFAREMLAGLNPVVIQLLKEFPPKSKLDSESYGNQNSTITKSHIEHNLDGL-TVEEALEKERLFILDHHDTLMPYLGRVNTTTTKT-YASRTLLFLKDDGTLKPLVIELSLPHPNGDKFGAVSEVYTPGEGVYDS-LWQLAKAFVGVNDSGNHQLISHWMQTHASIEPFVIATNRQLSVLHPVF 545
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 4.324e-47 Identity = 93/212 (43.87%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 73 IEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQWK--QVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 + + G+ L + P+ + + W DEEF+R+ LAGLNP I + E+P KS LD YG S+I TE IE + G+ +V+EA++Q KL+ILD+HD +PY+ ++ + T Y +RT+ L GTL+P+AIEL+ P G+ +VF P+ E +W+LAKA+ +D+GYHQL+SHWL+TH EP++IA+NRQLSV+HPI+ Sbjct: 359 VRNDGERFLKYPLPDILKESRSAWRTDEEFAREMLAGLNPVVISRLQEFPPKSCLDSAKYGNQHSSIRTEHIESNMNGL-NVQEALEQNKLYILDHHDALMPYLTRINSTNTKT-YATRTLLLLQADGTLKPLAIELSLPHAQGESYGSVSKVFTPAEKGVEGSVWQLAKAYAAVNDSGYHQLISHWLQTHAVIEPFIIASNRQLSVVHPIH 568
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.375e-47 Identity = 94/219 (42.92%), Postives = 137/219 (62.56%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKP--QWKQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 +P + G+ L F P+ + D W DEEF+R+ +AG+NP+ I+ + +P+KS LD ++YG S IT E +E +GG ++VE AI+ +LF D+HD PY+ K+ +T Y +RT+ FL GTL+P+AIEL+ P +G +V+LP+ E +W LAKA V+ +D+ YHQLVSHWL TH EP++IATNR LSV+HPI+ Sbjct: 336 IPLFSELFRSDGEAALKFPPPKVIQVDHSAWMTDEEFAREMIAGVNPHIIKEVLSFPIKSKLDSQLYGDNTSKITKEHLEPNLGG-VTVEGAIQTNRLFTPDHHDALFPYLRKINAT-ATKAYATRTVLFLQDNGTLKPLAIELSTPHPDGDSFGPVSKVYLPASEGVEASIWLLAKAFVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIH 552
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.632e-47 Identity = 98/219 (44.75%), Postives = 136/219 (62.10%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPIY 702 LP L + G+N L + P+ + + W DEEF+R+ LAG+NP I + E+P +S LD +IYG S I+ E +E + G+ +VEEAI+ KKLF+LD+HD +PY+ ++ ST Y +RTI FL L+P+AIEL+ P G V+ P+ E +W LAKA+V+ +D+ YHQLVSHWL TH EP+VIATNR LS +HPIY Sbjct: 332 LPVLKEIFRTDGENTLKYPPPKVIQVSRSGWMTDEEFAREMLAGVNPNVICCLQEFPPRSKLDSQIYGDHTSKISKEHLEPNLEGL-TVEEAIQNKKLFLLDHHDSIMPYLRRINST-STKAYATRTILFLNNNQNLKPLAIELSLPHPQGDEHGAVSYVYQPALEGVESSIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATNRHLSCLHPIY 548
BLAST of FC931207 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.803e-46 Identity = 96/218 (44.04%), Postives = 137/218 (62.84%), Query Frame = 1 Query: 52 LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPEIYGPPESAITTELIEKEIGGMISVEEAIKQKKLFILDYHDLFLPYVEKVRQLKSTTLYGSRTIFFLTPAGTLRPIAIELTRPPMNGKPQW--KQVFLPSWHSTECWLWKLAKAHVLAHDAGYHQLVSHWLRTHCCTEPYVIATNRQLSVMHPI 699 LP + + G+ +L F P + K W DEEF+R+ LAG+NP IR + E+P KS LDP YG S I+ +++ + +++EA+ +LFILDYHD F+P++ ++ + S Y +RTI FL GTL+P+AIEL+ P +G +V LP+ E +W LAKA+V+ +D+ YHQL+SHWL TH EP+VIATNRQLSV+HPI Sbjct: 336 LPVVKEIFRTDGEQVLKFTPPHVIRVSKSAWMTDEEFAREMLAGVNPCMIRGLQEFPPKSNLDPAEYGDHTSKISVDVLNLD---GCTIDEALASGRLFILDYHDTFIPFLRRINET-SAKAYATRTILFLKENGTLKPVAIELSLPHPDGDKSGFVSKVILPADEGVESTIWLLAKAYVVVNDSCYHQLMSHWLNTHAVIEPFVIATNRQLSVVHPI 549 The following BLAST results are available for this feature:
BLAST of FC931207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931207 ID=FC931207; Name=FC931207; organism=Citrus clementina; type=EST; length=704bpback to top |