FC931209
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_STAAB (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 +F R TE+A +++ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+EH+LL Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILL 110
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_STAA8 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain NCTC 8325) GN=clpC PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 +F R TE+A +++ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+EH+LL Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILL 110
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_STAA3 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus aureus (strain USA300) GN=clpC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 +F R TE+A +++ AQEEA RL H+ + AAKVL+S I EVEK+IG G V + +TPRAK+V+ELS++EAR+L HN++G+EH+LL Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILL 110
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 +F R TE+A +++ AQEEA RL H+ + AAKVL+S I EVEK+IG G + +TPRAK+V+ELS++EAR+L HN++G+EH+LL Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDQTGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILL 110
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 +F R TE+A +++ AQEEA RL H+ + AAKVL++ I + EVEK+IG G + + +TPRAK+V+ELS++EAR+L HN++G+EH+LL Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLETFEITEEKVVEEVEKLIGHGQEQMGA-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILL 110
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 +F R TE+A +++ AQEEA RL H+ + AAKVL S I EVEK+IG G + + +TPRAK+V+ELS++EAR+L HN++G+EH+LL Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLVSFNITEDKVIEEVEKLIGHGQEQMGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILL 110
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 +F R TE+A +++ AQEEA RL H+ + AAKVL S I EVEK+IG G + + +TPRAK+V+ELS++EAR+L HN++G+EH+LL Sbjct: 2 LFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLVSFNITEDKVIEEVEKLIGHGQEQMGT-LHYTPRAKKVIELSMDEARKLHHNFVGTEHILL 110
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_CHLPN (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia pneumoniae GN=clpC PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIP-FTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 MFE+FT +A ++I LA++EA+RL HN++ A VL+++GI+ AR EVE++IG G P T R K+ E + EEA L HNY+G+EHLLL Sbjct: 1 MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGIDFDTARQEVERLIGYGPEIQVYGDPALTGRVKKSFESANEEASLLEHNYVGTEHLLL 111
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_CHLTR (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia trachomatis GN=clpC PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGF-VAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 MFE+FT +A ++I LA++EA+RL HN++ A VL+++G++ A+ EVE++IG G V + T R K+ E + EEA L HNY+G+EHLLL Sbjct: 1 MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKHEVERLIGYGPEIQVCGDPALTGRVKKSFESANEEAALLEHNYVGTEHLLL 111
BLAST of FC931209 vs. ExPASy Swiss-Prot
Match: CLPC_CHLMU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia muridarum GN=clpC PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 365 MFERFTEKAIKLIMLAQEEARRLGHNFVXXXXXXXXXXXXXXXXAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIP-FTPRAKRVLELSLEEARQLGHNYIGSEHLLL 694 MFE+FT +A ++I LA++EA+RL HN++ A VL+++G++ A+ EVE++IG G P T R K+ E + EEA L HNY+G+EHLLL Sbjct: 17 MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKNEVERLIGYGPEIQVYGDPALTGRVKKSFESANEEASILEHNYVGTEHLLL 127 The following BLAST results are available for this feature:
BLAST of FC931209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931209 ID=FC931209; Name=FC931209; organism=Citrus clementina; type=EST; length=695bpback to top |