FC931210

Overview
NameFC931210
Unique NameFC931210
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length554
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11901 contig Ccv1_Contig11901:245..798. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_MYCLE (Enolase OS=Mycobacterium leprae GN=eno PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 9.923e-18
Identity = 46/58 (79.31%), Postives = 48/58 (82.76%), Query Frame = 2
Query:    8 MASHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 181
            M SH SGETEDT IADL V L +GQIKTGAP RSER+AKYNQLLRIEEELG  A YAG
Sbjct:  360 MISHRSGETEDTMIADLVVALGSGQIKTGAPARSERVAKYNQLLRIEEELGDAARYAG 417          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_KOCRD (Enolase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=eno PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.923e-18
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 2
Query:    8 MASHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA 184
            M SH SGETEDT IAD++V +  GQIKTGAP RSER+AKYNQLLRIEEELG  A YAGA
Sbjct:  360 MISHRSGETEDTTIADIAVAVNAGQIKTGAPARSERVAKYNQLLRIEEELGDAATYAGA 418          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_PYRHO (Enolase OS=Pyrococcus horikoshii GN=eno PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.296e-17
Identity = 46/63 (73.02%), Postives = 50/63 (79.37%), Query Frame = 2
Query:    5 VMASHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR 193
            V+ SH SGETEDT IADL+V L  GQIKTGAP RS+R AKYNQL+RIEEEL   AVYAG  FR
Sbjct:  362 VIVSHRSGETEDTTIADLAVALNAGQIKTGAPARSDRNAKYNQLIRIEEELEGIAVYAGKNFR 424          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_CLAMS (Enolase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=eno PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.296e-17
Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 2
Query:   14 SHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 181
            SH SGETEDT IADL+V +  GQIKTGAP RSER+AKYNQLLRIE++LGA AVYAG
Sbjct:  362 SHRSGETEDTTIADLAVAVEAGQIKTGAPARSERVAKYNQLLRIEQDLGAAAVYAG 417          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_THEON (Enolase OS=Thermococcus onnurineus (strain NA1) GN=eno PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.693e-17
Identity = 46/66 (69.70%), Postives = 50/66 (75.76%), Query Frame = 2
Query:    2 GVMASHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 199
            GV+ SH SGETED  IADL+V L  GQIKTGAP RS+R AKYNQL+RIEEEL   A Y G KFR P
Sbjct:  363 GVVVSHRSGETEDATIADLAVALNAGQIKTGAPARSDRNAKYNQLIRIEEELEGIAHYPGRKFRNP 428          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_PSEPW (Enolase OS=Pseudomonas putida (strain W619) GN=eno PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.693e-17
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 2
Query:   14 SHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG-AKFR 193
            SH SGETED+ IADL+VG A GQIKTG+ CRS+R++KYNQLLRIEE+LGA+AVY G A+FR
Sbjct:  368 SHRSGETEDSTIADLAVGTAAGQIKTGSLCRSDRVSKYNQLLRIEEQLGAKAVYRGRAEFR 428          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_PSEPK (Enolase OS=Pseudomonas putida (strain KT2440) GN=eno PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.693e-17
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 2
Query:   14 SHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG-AKFR 193
            SH SGETED+ IADL+VG A GQIKTG+ CRS+R++KYNQLLRIEE+LGA+AVY G A+FR
Sbjct:  368 SHRSGETEDSTIADLAVGTAAGQIKTGSLCRSDRVSKYNQLLRIEEQLGAKAVYRGRAEFR 428          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_PSEPG (Enolase OS=Pseudomonas putida (strain GB-1) GN=eno PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.693e-17
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 2
Query:   14 SHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG-AKFR 193
            SH SGETED+ IADL+VG A GQIKTG+ CRS+R++KYNQLLRIEE+LGA+AVY G A+FR
Sbjct:  368 SHRSGETEDSTIADLAVGTAAGQIKTGSLCRSDRVSKYNQLLRIEEQLGAKAVYRGRAEFR 428          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_PSEE4 (Enolase OS=Pseudomonas entomophila (strain L48) GN=eno PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.693e-17
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 2
Query:   14 SHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG-AKFR 193
            SH SGETED+ IADL+VG A GQIKTG+ CRS+R++KYNQLLRIEE+LGA+AVY G A+FR
Sbjct:  368 SHRSGETEDSTIADLAVGTAAGQIKTGSLCRSDRVSKYNQLLRIEEQLGAKAVYRGRAEFR 428          
BLAST of FC931210 vs. ExPASy Swiss-Prot
Match: ENO_MYCVP (Enolase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=eno PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.693e-17
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 2
Query:    8 MASHLSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 181
            M SH SGETEDT IADL+V + +GQIKTGAP RSER+AKYNQLLRIEEELG  A YAG
Sbjct:  360 MMSHRSGETEDTTIADLAVAVGSGQIKTGAPARSERVAKYNQLLRIEEELGDAARYAG 417          
The following BLAST results are available for this feature:
BLAST of FC931210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_MYCLE9.923e-1879.31Enolase OS=Mycobacterium leprae GN=eno PE=3 SV=2[more]
ENO_KOCRD9.923e-1876.27Enolase OS=Kocuria rhizophila (strain ATCC 9341 / ... [more]
ENO_PYRHO1.296e-1773.02Enolase OS=Pyrococcus horikoshii GN=eno PE=3 SV=1[more]
ENO_CLAMS1.296e-1778.57Enolase OS=Clavibacter michiganensis subsp. sepedo... [more]
ENO_THEON1.693e-1769.70Enolase OS=Thermococcus onnurineus (strain NA1) GN... [more]
ENO_PSEPW1.693e-1773.77Enolase OS=Pseudomonas putida (strain W619) GN=eno... [more]
ENO_PSEPK1.693e-1773.77Enolase OS=Pseudomonas putida (strain KT2440) GN=e... [more]
ENO_PSEPG1.693e-1773.77Enolase OS=Pseudomonas putida (strain GB-1) GN=eno... [more]
ENO_PSEE41.693e-1773.77Enolase OS=Pseudomonas entomophila (strain L48) GN... [more]
ENO_MYCVP1.693e-1777.59Enolase OS=Mycobacterium vanbaalenii (strain DSM 7... [more]

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Properties
Property NameValue
Genbank descriptionC34102F09EF PostHarvP1 Citrus clementina cDNA clone C34102F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931210 ID=FC931210; Name=FC931210; organism=Citrus clementina; type=EST; length=554bp
GGGTGTGATGGCCAGCCACCTCAGTGGTGAGACTGAAGATACTTTCATTG
CCGATCTCTCAGTGGGCTTGGCCACGGGTCAAATTAAGACAGGAGCACCA
TGCAGGTCAGAGCGCCTTGCAAAGTATAATCAGCTTCTGAGAATTGAAGA
AGAGCTCGGTGCTGAAGCAGTTTATGCTGGTGCCAAGTTCCGTGCCCCTG
TTGAACCCTACTAGAGTTTGAGATGCTGATCTGGTGTGGTGCTGGATTTG
AGCAATGGAGGTTTACTTCAATAAGTTATGTAAAATGGATTTTTATGGGT
TTTTAGCATTTTGTGACCCAAGATATTTCCTCAATAATTTTGACACAGTT
TTTGTCTGAGAGCTTGAACCTTGCTGTATGAGGAACCATTTCCTAGAGCA
TGTTTTTATTAAAATGAGTATCTAGTTGCGGTGCTAAGGCATTGTTTCTT
TCTTATTAGAATTTCAGCTCTGGCTTTTATCAGTTATTACTCTCCTTTGG
CAGTTTTTACTTTTAAGTGCTTATTATGCCAGTTGATCTGCGTTGTGGCA
ATNA
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