FC931216

Overview
NameFC931216
Unique NameFC931216
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 55/203 (27.09%), Postives = 92/203 (45.32%), Query Frame = 2
Query:   32 IFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQ 640
            IF LL L     +     K+ + R     P    + P+IGHL L+    PI +    ++ KYGP+  LR    PI++VSS     + F   D  +++R      + +   ++ F   PYG Y + ++K    +LL    L+  +++R  E++ F K L     + A     V I     +LT N   K+I G+  S ++ E +
Sbjct:   14 IFLLLCLFSRLSYDLFFRKTKDSRAGCALPPSPPSLPIIGHLHLILFV-PIHQSFKNISSKYGPLLHLRFFNFPIVLVSSASTAYEIFKAQDVNVSSRPPPPIEESLILGSSSFINTPYGDYSKFMKKFMVQKLLGPQALQRSRNIRADELERFYKTLL----DKAMKKQTVEIRNEAMKLTNNTICKMIMGRSCSEENGEAE 211          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11
Identity = 47/179 (26.26%), Postives = 82/179 (45.81%), Query Frame = 2
Query:   77 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 613
            II+  I+K      P     WP+IG LPLL     +   L  +A KYG I  L++G   + + S+ +  K    T D   + R        + Y+      A YGP W+ +RK++   +L    LE   +VR +E+   +K +  +  E      +VV+++++     N+  +++  KR
Sbjct:   20 IISTLISKTTGRHLPPGPRGWPVIGALPLLGAMPHVS--LAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNRPPNAGATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMSDMSREG----QRVVVAEMLTFAMANMIGQVMLSKR 192          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 46/190 (24.21%), Postives = 91/190 (47.89%), Query Frame = 2
Query:  107 KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIE---QLTFNISLKLIAGKRFSAKDYEEQGSEAWRIIE 667
            KN  P P   WP++G+L  L G++P  +    LA  YG I++L++G   +++ S+     +   T+DRIL+ R    + ++ G+       +     W+++RK+  TEL +   +E   HVR  + +  ++ L     E      +V+   L+     L F+ ++  +      + +++E     WR++E
Sbjct:   27 KNLPPGPK-PWPIVGNLLQL-GEKPHAQF-AELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEV-KIVEVIFGTLVNIFGNLIFSQNIFELGXPNSGSSEFKEY---LWRMLE 209          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 46/190 (24.21%), Postives = 91/190 (47.89%), Query Frame = 2
Query:  107 KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIE---QLTFNISLKLIAGKRFSAKDYEEQGSEAWRIIE 667
            KN  P P   WP++G+L  L G++P  +    LA  YG I++L++G   +++ S+     +   T+DRIL+ R    + ++ G+       +     W+++RK+  TEL +   +E   HVR  + +  ++ L     E      +V+   L+     L F+ ++  +      + +++E     WR++E
Sbjct:   26 KNLPPGPK-PWPIVGNLLQL-GEKPHAQF-AELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEV-KIVEVIFGTLVNIFGNLIFSQNIFELGDPNSGSSEFKEY---LWRMLE 208          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 57/217 (26.27%), Postives = 97/217 (44.70%), Query Frame = 2
Query:   20 FSPPIF-ELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKL-IAGKRFSAKDYEEQGSEAWRII 664
            FS PI  ELL  L++     ++   + +  KN  P P    P++G++  L G  P  + L  L+ KYGP+ ++ LG    ++V S E  ++    +D    TR K+   K   YD        +G Y+RD+RK+   EL S  R    +++R  E+   +       S  +       ++K +   T  ++  L   G     + + E  +EA R+I
Sbjct:    4 FSFPISTELLPWLLLLLIPPLLIFFLLRSPKNLPPGPPRL-PILGNIHQL-GSLPH-RSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANLAKFVASFTCRMAFGLSFQGSGMDNETFLELFTEANRVI 217          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11
Identity = 36/120 (30.00%), Postives = 58/120 (48.33%), Query Frame = 2
Query:  101 REKNTAPEPSGAWPLIGHLPLL--NGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLE 454
            +  N  P P  AWP++GHLP L      P    +  +A KYGP+  L+ G H  +  S+ E   +   TND++L+ R  +   ++  + +     +    YW+  RKI  TE+ S   L+
Sbjct:   24 KHTNLPPSPP-AWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKPHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQ 142          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11
Identity = 51/199 (25.63%), Postives = 94/199 (47.24%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 637
            L   LI +    I+   I +   N  P P    P+IG+L  + G+ P  +    LA++ G +  L LG  P+ ++SS E  ++   T+D    +R  +V  +L+          PYG  W++ R+    EL  S +L+   +++  E +  +K L    SE+A + + V +SK +  L  +I  ++  G+ F   ++ +
Sbjct:    6 LCLFLITFVSLTIVGCKIKRSIWNLPPSPPKL-PVIGNLHQV-GELPH-RSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKL----SESAVDQSPVDLSKTLFWLAASILFRVAFGQSFHESEFTD 197          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11
Identity = 50/197 (25.38%), Postives = 90/197 (45.69%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 631
            LL    ++     + K +   +    P P+G  P+IG+L  L     +      L+ ++GP+  LR G  P++++SS E  K    + D    +R K+VA  L   +    A A YG  WR+++K+   EL +  + +  +++R  E D  +K L    S+++     V + K     T  I  ++  G+ F   D+
Sbjct:    6 LLCFFFLFPLLLTLFKKLLPSKWKLPPGPTGL-PIIGNLHQLG--RLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKL----SKSSQTQTLVDLRKAFFSFTAGIIFRVSFGQNFRECDF 195          
The following BLAST results are available for this feature:
BLAST of FC931216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
THAD_ARATH3.475e-1127.09Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C75A1_PETHY4.539e-1126.26Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C80B2_ESCCA5.928e-1124.21(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA5.928e-1124.21(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71B6_ARATH5.928e-1126.27Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C80A1_BERST7.743e-1130.00Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71BH_ARATH7.743e-1125.63Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH7.743e-1125.38Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC34102G05EF PostHarvP1 Citrus clementina cDNA clone C34102G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931216 ID=FC931216; Name=FC931216; organism=Citrus clementina; type=EST; length=672bp
GACCATGGACTCTACTTCTTTCAGCCCACCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTGTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCAGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACTAGGGCAAAAATTGTAGCAGGCAAGTTGA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCCGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCAGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTGACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGG
CTTGGCGTATCATAGAGCAATA
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