FC931216

Overview
NameFC931216
Unique NameFC931216
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.230e-17
Identity = 57/196 (29.08%), Postives = 97/196 (49.49%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 631
            L  L++   + I  K ++  +    P P G  P+IG+L  L   + + +    L+  YGP+  L  G  P+++VS+ E  ++   T+D    TR K+ A KL  Y+      A YG  WR++RK+A  EL SS +L+  +++R  E +  +  L    S++A     V + K +   T +I  +L  G+ F   D+
Sbjct:    5 LYFLLLLPLFLIFFKKLSPSKGKLPPGPLGL-PIIGNLHQLG--KSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKL----SKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHECDF 193          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.443e-17
Identity = 54/160 (33.75%), Postives = 88/160 (55.00%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINK-REKNTAPEPSGAW--PLIGHLPLLNGQEPIC-KILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYS 511
            LS++I +  + ++   +   ++K++   P G W  P+IG+L  L     +  + L  L  KYGP+  L+LG+   L+VSS ++  +   T+D     R +++A + M Y     A APYG YWR IRKI T ELLS+ R++   H+R  E    I+ ++S
Sbjct:    6 LSIVITFFVFLLLHWLVKTYKQKSSHKLPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHS 165          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.443e-17
Identity = 55/160 (34.38%), Postives = 86/160 (53.75%), Query Frame = 2
Query:   32 IFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL 505
            IF  +S L +   W+   K +N  +  T   P G W  P IG +  L G  P  ++L  LA+KYGP+  L+LG+   ++V+S E+ K    T+D   A+R K++A  ++ Y+    A +PYG YWR +RKI   E+LS+  +     +R+ EV   I  +
Sbjct:    6 IFLFISFLFLLRKWK---KYLNNSQ--TKKLPPGPWKLPFIGGMHHLAGGLPH-RVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSI 159          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.443e-17
Identity = 53/181 (29.28%), Postives = 94/181 (51.93%), Query Frame = 2
Query:   86 KSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 628
            KS+ KR  +  P      P+IG+L  L+      + L +L+ ++GP+  LR G+ P+LIVSS ++  D   T+D   A R    +   +         APYG YWR+++ + T  LLS+  ++  +  R  E+   ++ L     E + + + V +SKLI  +  +I  K++ GK++S ++
Sbjct:   22 KSLLKRPNSNLPPSPWRLPVIGNLHQLSLHPH--RALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL----EEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGEE 196          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 58/194 (29.90%), Postives = 104/194 (53.61%), Query Frame = 2
Query:   56 IVYCFWRIIAKSINKREKNTA-------PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATR-AKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 613
            +++CF  I++K+  K  +N+        P      P++G+   L+G      IL  LA KYGP+  L++G+   ++ SS +I ++ F T+D + A R + + + K++ YD +   ++PYG YWR +RKI+  ELLS   ++  + +R  EV  FIK + S          ++ +SK I  L + I+ +   G++
Sbjct:    1 LLFCF--ILSKTTKKFGQNSQYSNHDELPPGPPQIPILGNAHQLSGGHTH-HILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSK------EGTRINLSKEISLLIYGITTRAAFGEK 185          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 61/200 (30.50%), Postives = 105/200 (52.50%), Query Frame = 2
Query:   50 LLIVYCFWRIIAKSINKREKNTAPE----PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKI-VAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK 625
            +LI  C   ++A  +    K TA +    P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ P+LIVSS ++  D   T+D + A R K  V  K++     + A APYG YWR ++ I    LL++  +   + +R  E+   I+ L  + CS    +P+ V +S+++  LT +I  ++  G+++S K
Sbjct:    4 ILITLCLTTLLALLLKSILKRTATKNFNLPPSPWRLPVIGNLHQLSLHTH--RSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDV-AFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSS---SPSPVNLSQILMTLTNDIICRVALGRKYSGK 197          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 58/195 (29.74%), Postives = 95/195 (48.72%), Query Frame = 2
Query:   89 SINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF--SAKDYEEQGSEAWRIIE 667
            ++ +R +   P     WP++G+L  +      C      A  YGPI S+  G    +IVS+ E+ K+    +D++LA R +  +      D      A YGP++  +RK+ T EL S  RLE L+ +R  EV + +  +Y+ C+        +++ K +  + FN   +L  GKRF  S    +EQG E   I+E
Sbjct:   19 TLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRC--FAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVE 211          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 58/196 (29.59%), Postives = 97/196 (49.49%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 631
            L  L++     I+ K +   +    P P G  P+IG+L  L   + + K    ++ +YGP+  LRLG  P+++VSS E  ++   T+D    TR K  A  L  Y+      AP+G  WR++RKI T EL S  +L+  +++R  E +  +K +     E     + V + K++   T +I  +L  G+ F   D+
Sbjct:    5 LCFLLLLPLSLILFKKLLPSKGKLPPGPIGL-PIIGNLHQLG--KLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDET--QNSSVDLRKVLFSFTASIICRLAFGQNFHQCDF 195          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 56/192 (29.17%), Postives = 93/192 (48.44%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            L++LL    F   + K        T P      P++G+L  L G  P  + L +L+ +YGP+  L  G  P+L+ SS E  ++     D   + R  +   + + YDN   A APYG YWR IR I   +LLS+ R++  + VR  E    ++ +  L  +     A V ++ L+  LT ++  ++  GK++
Sbjct:    2 LIALLCTLPFLFFLKKWRRSYSGKTPPPSPPKLPVLGNLHQL-GTFPH-RSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQL--QKTTPTAAVNLTDLLTCLTNDVFCRIALGKKY 189          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 64/214 (29.91%), Postives = 102/214 (47.66%), Query Frame = 2
Query:   29 PIFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRIIEQ 670
            P+F  + LLI +CF+     +  K+     P P    P+IG+L  L G  P  + L  L+ KYGP+  L  G  P+++ SS +  +D   T+D + A+R K      + Y +     +P+G YWR  + I    LLS+ R++  ++VR  E    I  +   C  +  N  + + S     LT NI  ++  G     + Y+E+ S    IIEQ
Sbjct:   13 PLFVFIFLLIHHCFFT----TSKKQNMLLLPSPRKL-PIIGNLHQL-GSLPH-RSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHLCS-----LTNNIISRVALG-----RTYDEKESGIEHIIEQ 209          
The following BLAST results are available for this feature:
BLAST of FC931216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
C71BM_ARATH7.230e-1729.08Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71D8_SOYBN9.443e-1733.75Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71D7_SOLCH9.443e-1734.38Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71AG_ARATH9.443e-1729.28Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO1.233e-1629.90Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71AK_ARATH1.233e-1630.50Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN1.611e-1629.74Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C71BZ_ARATH2.104e-1629.59Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA2.104e-1629.17Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71A2_SOLME2.104e-1629.91Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC34102G05EF PostHarvP1 Citrus clementina cDNA clone C34102G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931216 ID=FC931216; Name=FC931216; organism=Citrus clementina; type=EST; length=672bp
GACCATGGACTCTACTTCTTTCAGCCCACCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTGTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCAGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACTAGGGCAAAAATTGTAGCAGGCAAGTTGA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCCGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCAGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTGACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGG
CTTGGCGTATCATAGAGCAATA
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