FC931216

Overview
NameFC931216
Unique NameFC931216
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 53/191 (27.75%), Postives = 92/191 (48.17%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            L LL + C      +   +R+    P     +P+IG+L  L G+ P  + L +L+ KYGP+  L+ G  P ++VSS E  K     +D    +R  +   + + Y+      +P+  YW+++R++   EL S  ++ L++ +R  EV    K L +  SE+A     V +S+ +  LT  +  K   G  F
Sbjct:    7 LPLLFLSCLLLAALRLKKRRQHQRKPPSPPGFPIIGNLHQL-GELPH-QSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEV----KKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFGVSF 191          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 54/184 (29.35%), Postives = 91/184 (49.46%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLK 595
            LSLL + C      K   +R     P     +P+IG+L  L G+ P  + L +L+  YGP+  L+LG  P ++VSS E  K     ND    +R  +   K + Y+    A +P+  YW+++R+I   EL S+ R+  ++ ++  EV    + L    +E+A   + V +S+    LT ++  K
Sbjct:    7 LSLLFLCCILLAAFKHKKRRTNQQQPPSPPGFPIIGNLHQL-GELPH-QSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEV----RKLIVSATESASQKSPVNLSEKFLDLTVSVICK 184          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 52/192 (27.08%), Postives = 95/192 (49.48%), Query Frame = 2
Query:   77 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEA 652
            I++K +   +    P P    P+IG+L  L G    C     L+ K+GP+  L  G  P++++SS E  ++   T D    +R + VA +++ Y+      APYG  W+ +RK+   ELL++ + +  +++R  E D  IK L    +E+A   + V + K +  L  +I  +L  G      ++ ++ + A
Sbjct:   20 ILSKRLKPSKWKLPPGPK-TLPIIGNLHNLTGLPHTC--FRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKL----TESALKKSPVNLKKTLFTLVASIVCRLAFGVNIHKCEFVDEDNVA 204          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 54/177 (30.51%), Postives = 96/177 (54.24%), Query Frame = 2
Query:   77 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK-DLYSLCSENAFNPAKVVI---SKLIEQLTFNISLK 595
            +IAKS  K +KN  P P    P+IG+L  L G++P  + +  L+  YGP+ SL+LG    ++ +S E V+D   T D    +R  +     + Y+      +PY  YWR +RK+   EL ++ R++  +H+R  EV +F++ +  +  SE   N ++ ++     +I ++ F I+L+
Sbjct:   17 LIAKSKRKPKKNLPPGPPRL-PIIGNLHQL-GEKPH-RAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINLE 190          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15
Identity = 55/181 (30.39%), Postives = 92/181 (50.83%), Query Frame = 2
Query:   95 NKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 637
            ++ ++N  P P    PL+GHL LL G+ P    +  +A KYGP+  ++LG+   +++SS E  K+     D   A R + +  ++M YDN     +PY  +WR +RKI  +ELLS+  +     +R  E+   ++ L S   E       V +++ I  LT +I  +   G   +  D+EE
Sbjct:   28 SESQQNLPPGPPKL-PLVGHLHLLWGKLPQ-HAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGET------VDMTERIATLTCSIICRAAFGAIIN--DHEE 198          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15
Identity = 59/208 (28.37%), Postives = 100/208 (48.08%), Query Frame = 2
Query:   38 ELLSLLIVYCFWRIIAKSI----NKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSE 649
            EL+   I+Y    II + +    + R +   P P G WP+IG LPLL G   +   L  +A KYGPI  L++G   +++ S+    K    T D   + R        M Y+      APYGP W+ +RK++   +L    LE   +VR +E+   +K ++    + +    ++V++   + LTF ++  +I     S + + E+G E
Sbjct:    7 ELIGATIIYIIVYIIIQKLIATGSWRRRRLPPGPEG-WPVIGALPLLGGMPHVA--LAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMF----DASHVGERIVVA---DMLTFAMA-NMIGQVMLSKRVFVEKGKE 203          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 60/204 (29.41%), Postives = 99/204 (48.53%), Query Frame = 2
Query:   32 IFELLSLLIVYCFWRIIAKSINKRE--KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 637
            I   + +L+      ++ K   K E  +N  P P    PL+GHL LL G+ P    +  +A KYGP+  ++LG+   +++SS E  K+     D   A R + +  ++M YDN     +PY  +WR +RKI  +ELLS+  +     +R  E+   ++ L S   E       V +++ I  LT +I  +   G   +  D+EE
Sbjct:    5 ISSAIIILVATFVASLLIKQWRKSESRQNLPPGPPKL-PLVGHLHLLWGKLPQ-HAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGET------VDMTERIATLTCSIICRAAFGAIIN--DHEE 198          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 62/214 (28.97%), Postives = 104/214 (48.60%), Query Frame = 2
Query:    2 TMDSTSFSPPIFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHL-PLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGK-LMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 637
            T   +S+   IF +L+ +I    + +  K+ +K+ K   P P G WP++G+L  +    +P  +I+  L  KYGPI++LR+G   ++I+S+ ++V +      ++ ATR +    + +   D      A YGP WR +RK      LSS RL+  + VR S +D  I+    + +E   N   V + K      F I L +  G     K  E+
Sbjct:    6 TSSLSSYYHLIFTILAFVISSIIYFLSKKAESKKLK-LPPGPPG-WPVVGNLLQVARSGKPFFQIMRELRQKYGPIFTLRMGTRTMIILSNADLVHEALILKGQVFATRPRENPTRTVFSCDKFTVNAAVYGPVWRSLRKNMVQNGLSSIRLKEFRAVRKSAMDKMIE---KIRAEADANEGVVWVLKNARFAVFCILLAMCFGVEMDEKTIEK 214          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 56/209 (26.79%), Postives = 98/209 (46.89%), Query Frame = 2
Query:   35 FELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRI 661
            F LL    + C+  +  K  +        +   + P+IGHL  L       K L  L+ KYGP+  L +   P+++VSS  +  + F  +D  +++R      + +   +++F  APYG YW+ ++K+  T+LL    LE  + +R  E++ F + L     + A     V I K   +L+ N   ++  G+ FS     E+  EA R+
Sbjct:   12 FILLCFFSLLCYSLLFKKLKDSHVGRDLLQSPPSLPIIGHLHHLLSSLAH-KSLQQLSSKYGPLLHLSIFNFPVVLVSSASVAYEIFKAHDLNISSRDNPPINESLLVGSSVFVGAPYGDYWKFMKKLLVTKLLGPQALERSRSIRADELERFYRSLL----DKAMKKESVEIGKEATKLSINSICRMSMGRSFS-----EESGEAERV 210          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 55/200 (27.50%), Postives = 103/200 (51.50%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS-AKDYEE 637
            L+ L I+   +    K++NK     +P      PLIG+L  L+ Q P  + L  L+ +YGP+  L  G  P+++ S+ E  +D   T+DR+ A+R +    + + Y +   A APYG YWR ++ ++   LLS+  +   + VR  E+   ++ +    S+       V +SK++  LT ++  ++  G+++    D++E
Sbjct:    7 LIILFIITILFFKKHKTVNKIINFPSPP---RLPLIGNLHQLS-QHPH-RSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSK------PVNLSKILSSLTNDVICRVALGRKYGVGTDFKE 195          
The following BLAST results are available for this feature:
BLAST of FC931216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
C71BY_ARATH2.326e-1527.75Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH2.326e-1529.35Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71B7_ARATH2.326e-1527.08Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71B1_THLAR2.326e-1530.51Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C7D95_MENGR5.181e-1530.39Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C75A2_SOLME5.181e-1528.37Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C7D95_MENSP6.767e-1529.41Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C77A2_SOLME8.838e-1528.97Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C75AK_ARATH8.838e-1526.79Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C71AN_ARATH8.838e-1527.50Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34102G05EF PostHarvP1 Citrus clementina cDNA clone C34102G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931216 ID=FC931216; Name=FC931216; organism=Citrus clementina; type=EST; length=672bp
GACCATGGACTCTACTTCTTTCAGCCCACCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTGTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCAGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACTAGGGCAAAAATTGTAGCAGGCAAGTTGA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCCGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCAGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTGACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGG
CTTGGCGTATCATAGAGCAATA
back to top