FC931216

Overview
NameFC931216
Unique NameFC931216
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14
Identity = 52/163 (31.90%), Postives = 82/163 (50.31%), Query Frame = 2
Query:   38 ELLSLLIVYCFWRIIAKSIN-----KREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYS 511
            +LLS +I+     I++  IN     K ++N  P P    P+IGHL  L G  P   +  ++A KYGP+  ++LG+   +++SS E  K      D   A R   +  + M YD      +PY  +WR +R+I  TELLS   +    ++R  E++  I+ L S
Sbjct:    4 DLLSAIIILVATYIVSLLINQWRKSKSQQNLPPSPPKL-PVIGHLHFLWGGLPQ-HVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGS 164          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14
Identity = 52/163 (31.90%), Postives = 82/163 (50.31%), Query Frame = 2
Query:   38 ELLSLLIVYCFWRIIAKSIN-----KREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYS 511
            +LLS +I+     I++  IN     K ++N  P P    P+IGHL  L G  P   +  ++A KYGP+  ++LG+   +++SS E  K      D   A R   +  + M YD      +PY  +WR +R+I  TELLS   +    ++R  E++  I+ L S
Sbjct:    4 DLLSAIIILVATYIVSLLINQWRKSKSQQNLPPSPPKL-PVIGHLHFLWGGLPQ-HVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGS 164          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.154e-14
Identity = 57/209 (27.27%), Postives = 101/209 (48.33%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRIIE 667
            LL L +   F++ +  S     K   P    + P+IG+L  L   + + +    L+ +YGP+  LR G  P+++ S+ E  ++   T+D    TR K+ A  L  Y+      A YG  WR++RK+A  EL SS +L+  +++R  E +  +K +    +E+A     V + K +   T +I  +L  G+ F   D+ +       ++E
Sbjct:    8 LLLLPLFLVFYKRLLPS-----KGKLPPGPISLPIIGNLHQLG--KSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKV----TESAQTQTLVDLRKALFSYTASIVCRLAFGQNFHECDFVDMDKVEELVLE 205          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14
Identity = 51/177 (28.81%), Postives = 88/177 (49.72%), Query Frame = 2
Query:   77 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSE----NAFNPAKVVISKLIEQLTFNISLK 595
            I  K++   +    P P    P+IG+L       P  +    L++KYGPI  LR G  P++++SS E  ++   T+D    +R + V  + + Y+      APYG  WR +RK++  EL SS +L+  +++R  E D  +K L  L S     N       ++  ++ ++ F I+L+
Sbjct:   16 IFLKNLKPSKWKLPPGPKKL-PIIGNLHQRRELHP--RNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLR 189          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14
Identity = 61/197 (30.96%), Postives = 103/197 (52.28%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATR--AKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 616
            LL+LL++  F +  AK +N         P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ PIL+VSS E   +   T+D   A R  +K V G + G  + +F   PYG YWR ++ +    LL++  +   + VR  EV+  ++ L  + CS +A N     +S+L   LT +++ ++  GK++
Sbjct:   14 LLTLLLLKKFLKRTAKKVNL--------PPSPWRIPVIGNLHQLSLHPH--RSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVF--GPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAEN-----LSELFVTLTSDVTSRVSLGKKY 193          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.969e-14
Identity = 58/187 (31.02%), Postives = 92/187 (49.20%), Query Frame = 2
Query:   47 SLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAG 607
            SL+IV   +  I+    +R     P P G WP+IG++ +++  +   + L  LA KYG +  LR+G   +  VSS E+ +      D + + R   +A   + YD A  A A YGP+WR +RK+   ++ S  R E    VR  EVD  ++ +    S N   P  + + + I  LT NI+ +   G
Sbjct:   18 SLVIVVSLFIFISFITRRRRPPYPPGPRG-WPIIGNMLMMD--QLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVR-DEVDKMVRSV----SCNVGKP--INVGEQIFALTRNITYRAAFG 194          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14
Identity = 52/153 (33.99%), Postives = 77/153 (50.33%), Query Frame = 2
Query:   44 LSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATR-AKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 499
            + L+    F  I+ +  NK +    P P    P+IGHL LL+      +    L+ +YGPI  L LG  P ++ S+ E  K+   T++   + R A  VA + + Y    F  APYGPYW+ ++K+  +ELL  H L+    VR  E   FIK
Sbjct:    8 ICLISTIVFASILWRKQNKNKTLLPPSPMPL-PIIGHLHLLSPTPH--QDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIK 157          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 52/158 (32.91%), Postives = 85/158 (53.80%), Query Frame = 2
Query:   47 SLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPIC-KILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATR-AKIVAGKLMGYDNA--IFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLY 508
            +++  Y  WR       + +KN  P P  A P+IGHL L++   PI  +    L+ ++GPI  L LG  P ++ S+ E  K+   T++   + R  + VA K + YD+   +FA AP+GPYW+ ++K+  +ELLS   ++    VR  E   FI  ++
Sbjct:   13 TIVFAYILWR------KQSKKNLPPSPK-ALPIIGHLHLVS---PIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVF 160          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 67/213 (31.46%), Postives = 100/213 (46.95%), Query Frame = 2
Query:   32 IFELLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVV-ISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRIIE 667
            I  +++L  V  F+ +  K   KR K   P PS   P+IG+L  L    P  +     A KYGPI S R+G   ++++SS E+ K+   T D   A R      + + Y     AL  Y PY+R+IRK+    L S  R+   KHVR  E    +  +       A + ++VV IS+L+   T ++  +   GK+     Y E G E  R I+
Sbjct:    5 IIGVVALAAVLLFF-LYQKPKTKRYK-LPPGPSPL-PVIGNLLQLQKLNPQ-RFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKI-----NKAADKSEVVDISELMLTFTNSVVCRQAFGKK-----YNEDGEEMKRFIK 203          
BLAST of FC931216 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14
Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 2
Query:   41 LLSLLIVYCFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSSWEIVKDCFTTNDRILATRAKIVAGKLMGYDNAIFALAPYGPYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 499
            LL ++I+   + +   +   R+  +  +     P+IGHL LL G  P   +L ++A +YGP+  ++LG+   +++SS E  K      D   A R   V  ++M YDN     +PY  +W  +RKI  +ELLS   +     +R  E++  I+
Sbjct:    6 LLVIIILVATYTVSLLNKQWRKPKSQQKQPPKLPVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIR 158          
The following BLAST results are available for this feature:
BLAST of FC931216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
C71DI_MENSP1.154e-1431.90Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR1.154e-1431.90Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71BL_ARATH1.154e-1427.27Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH1.508e-1428.81Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH1.508e-1430.96Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH1.969e-1431.02Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C93A3_SOYBN3.358e-1433.99Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C93A1_SOYBN4.386e-1432.91Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C83A1_ARATH4.386e-1431.46Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C7D94_MENGR4.386e-1429.41Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34102G05EF PostHarvP1 Citrus clementina cDNA clone C34102G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931216 ID=FC931216; Name=FC931216; organism=Citrus clementina; type=EST; length=672bp
GACCATGGACTCTACTTCTTTCAGCCCACCAATTTTTGAGCTCTTATCTC
TGCTAATTGTCTATTGTTTTTGGAGAATCATAGCAAAATCTATAAACAAA
AGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGG
CCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAG
CATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCAT
CCCATATTGATTGTGAGCAGTTGGGAAATTGTGAAGGATTGCTTCACTAC
CAATGACAGAATTCTGGCTACTAGGGCAAAAATTGTAGCAGGCAAGTTGA
TGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCCGTACTGG
CGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCT
TGAATTGCTGAAGCACGTTCGCTACTCAGAAGTTGACACTTTCATCAAAG
ATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTG
ATCAGCAAGTTAATCGAGCAGTTGACTTTCAATATAAGCCTGAAACTGAT
AGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGG
CTTGGCGTATCATAGAGCAATA
back to top