FC931219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 9.486e-71 Identity = 126/203 (62.07%), Postives = 149/203 (73.40%), Query Frame = 1 Query: 97 LVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699 L L DA P + G HATFYGGSDASGTMGGACGYG+LYS GYG TAALSTALFN+G SCG C+ I C A + WC G+ S+++TATNFCPPN+ALP++NGGWCNPP HFD+A P + KI YR GIVPV ++RV C KKGG+RF ING YF LV + NV GAG I V++KGS+TGW++MSRNWG NW Sbjct: 11 LAALFIAVDAFRPSGLTNG-----HATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGA-SVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANW 207
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 265.388 bits (677), Expect = 2.113e-70 Identity = 122/202 (60.40%), Postives = 149/202 (73.76%), Query Frame = 1 Query: 100 VCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699 +CL VA G + W A ATFYGGSD SGTMGGACGYGNLY QGYGV+ AALS ALFN+G SCG C+ I C + P WC +G+ ++ VTATN CPPN+ALPSD GGWCNPPRPHFD++ P + +I Y+AGIVPV Y+RV C ++GG+RFT+ G YF LVL+TNVAG+G + +KG+ TGW+ MSRNWG NW Sbjct: 11 LCLAVVAACAAGGAVAD--WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGT-AVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANW 209
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 264.618 bits (675), Expect = 3.605e-70 Identity = 115/183 (62.84%), Postives = 147/183 (80.33%), Query Frame = 1 Query: 157 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC--ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699 W ATFYGG+DASGTMGGACGYGNLY+ GYG NTAALS+ LFN+G SCG C+ I C A P WC +G+ ++ +TATN CPPN+ALPS++GGWCNPPRPHFD+A P +L+I Y+AGI+PV Y++V C ++GGIRFT+ GF +F LVLV+NVAG+G + V+VKG TGW++++RNWG NW Sbjct: 27 WNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGA-AVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANW 208
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.149e-70 Identity = 118/182 (64.84%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 157 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699 W A ATFYGGSD +GTMGGACGYGNLY+ GYG+N AALS+ALFN+G CGAC+ I C ++ WC G+ SI +TATN CPPNYA SD GGWCNPPR HFD++ P + IA Y+AGIVPV+++RVPC+K GGIRFTI+G YF LV V NV G+G + +V++KGS+T WM+MSRNWGQNW Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGT-SITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNW 203
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.149e-70 Identity = 122/194 (62.89%), Postives = 144/194 (74.23%), Query Frame = 1 Query: 145 SGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSG------SPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVK---GSRTGWMSMSRNWGQNW 699 + G W AHATFYGG+DASGTMGGACGYGN Y QGYG +TAALS +F +GLSCGACFE++C G SI+VTAT+ CP N+ALP D GGWCNPP HFDL+ P FL+IA +++GIVPVSYRRV CR+KGG+RFTING YFNLVLV+NV GAGD+ V VK G + W +M+RNWGQNW Sbjct: 26 AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNW 219
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.049e-69 Identity = 116/180 (64.44%), Postives = 144/180 (80.00%), Query Frame = 1 Query: 163 SAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKC-ANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699 S ATFYGGSDASGTMGGACGYGNLYS GYG NTAALS+ALFN+G +CG C++I C + WC +G+ S+ +TATN CPP+Y+ PS++GGWCNPPR HFD+A P + +I YR GIVPV+++RV C +KGG+RFTING YF LVL+TNV G G I V +KG++TGW++MSRNWG NW Sbjct: 26 SGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGT-SVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANW 204
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 262.692 bits (670), Expect = 1.370e-69 Identity = 124/197 (62.94%), Postives = 148/197 (75.13%), Query Frame = 1 Query: 115 VADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCAN--EPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699 +A A L + G W S ATFYGGSDASGTMGGACGYGNLY GYG NTAALS+ALFN+G SCG C++I C + EP WC G ++ +T TN CPPNYAL S++GGWCNPPR HFD+A P +L+I Y+AGIVPV Y+RVPC K+GG+RFT+ GF YF LVL++NVAG+G I V VKG T M +SRNWG NW Sbjct: 19 IAAASLIAPTTAG-WSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGR-TVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANW 213
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 3.052e-69 Identity = 121/211 (57.35%), Postives = 150/211 (71.09%), Query Frame = 1 Query: 88 ILFLVCLMWVADARLP------GDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGS-RTGWMSMSRNWGQNW 699 ++FLV L DA P G ++ GPW+ AHATFYGG D SGT+ GACGY + +GYGV T A+ST LF G CGAC+E+KC + P C G+ ++VTATN CPPN +DNGGWCNPPR HFDL+MP FL+IA+ +AGIVP+SYRRVPC K GGIR+TI G YFNLV+V+NV GAGD+ ++VKG+ R W + RNWGQ W Sbjct: 14 VVFLVALA-AGDAAPPKVHRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEW 223
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.798e-69 Identity = 117/186 (62.90%), Postives = 140/186 (75.27%), Query Frame = 1 Query: 142 YSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699 Y+G PW++A ATFYG S TMGGACGYGN+Y GYGV T ALSTALFN G +CG CF++KC + P C+ GSP+ +VTATN CPPNY S+NGGWCNPPR HFDL P F+KIA ++AGI+PVSYRRV C+K GGIRF G Y+ LV V NV G GDI + VKGSRTGW++MS NWG ++ Sbjct: 26 YAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASY 210
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 2.583e-68 Identity = 120/205 (58.54%), Postives = 148/205 (72.20%), Query Frame = 1 Query: 91 LFLVCLMWVADARLPGDYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPA--WCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699 L ++C + A L + W A ATFYGG+D SGTMGGACGYGNLY QGYG+ AALSTALFN+G +CG C+ I C + A WC ++ VTATN CPPN+ALPSD GGWCNPPR HFD++ P + +I YRAGIVPV YRRV C ++GG+RFT+ GF +F LVLV NVAG+G + V+V+G+ TGW+ MSRNWG NW Sbjct: 8 LLVLCTILAARMALA---AADDWIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRG-AVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANW 208 The following BLAST results are available for this feature:
BLAST of FC931219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931219 ID=FC931219; Name=FC931219; organism=Citrus clementina; type=EST; length=699bpback to top |