FC931219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16 Identity = 60/203 (29.56%), Postives = 97/203 (47.78%), Query Frame = 1 Query: 151 GPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTINGFR---YFNLVLVTNVAGAGDILRVNVKGSRTG-------WMSMSRNWGQNW 699 GPW A AT+YG + +G GGACG+ + + T+ + LF +G CG+C++I+C + + C S ++++T N+ P P HFDL+ F ++A+ +GI+ + + RVPC G I F + + YF VLV G GD+++V++ S+T W M +WG W Sbjct: 53 GPWTKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKDQS-CSGRSETVIITDMNYYP---VAPF-----------HFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYF-AVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIW 239
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 72/224 (32.14%), Postives = 106/224 (47.32%), Query Frame = 1 Query: 88 ILFLVCLMWVADARLPGDYS-----GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSIL-VTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTIN---GFRYFNLVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNW 699 ++FLV W ++P + G W A AT+YG +G GG CGY ++ + A + +F +GL CG+CFEIKC ++P C SG P ++ +T N+ P HFDLA F +A+ +AGI+ + +RRV C+ + F + G Y L LV V G GDI+ V+V KGS T + + +WG W Sbjct: 22 LVFLVRGAWCGPPKVPPGKNITATYGKDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC-DKPVEC-SGKPVVVHITDMNYEP--------------IAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCGPNYLAL-LVKYVDGDGDIVAVDVKEKGSDT-YEPLKHSWGAIW 227
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16 Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 1 Query: 145 SGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIA-------EYRAGIVPVSYRRVPCRKKG-GIRFTINGFRYFN--LVLVTNVAGAGDILRVNVKGSRTG--WMSMSRNWGQNW 699 S W A +T+YG G+ GGACGYGN +Q + +A +LF +G CGAC+++KC ++ A S +P + V T+ CP C HFDL+ F +A G + + Y++V C G + F ++ N VLV V G G+I R+ +K + W+SMS++WG W Sbjct: 43 SDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSAC--SKNP-VTVVITDECP-----------GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVW 226
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16 Identity = 60/196 (30.61%), Postives = 93/196 (47.45%), Query Frame = 1 Query: 154 PWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIA------EYR-AGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNV-KGSRTGWMSMSRNWGQNW 699 PW A AT+YG SG+ GGACG N+ Y + + +F +G CG+C+E+KC +PA C ++ +T N+ P + HFD + F +A E R AGI+ + +RRV C+ GG + T + + N VLV VA GD++++++ + W M +WG W Sbjct: 42 PWLPARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKC-EQPAACSKQPVTVFITDMNYEPIS--------------AYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIW 222
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16 Identity = 56/196 (28.57%), Postives = 90/196 (45.92%), Query Frame = 1 Query: 157 WQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG---GIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTG---WMSMSRNWGQNW 699 W +A AT+YG + +G GGACG+ + + T+ + L+ G CG+C+ ++C PA C + ++ +T N+ P + + HFDL+ F ++A+ RAGI+ V + RVPC G G + VLV G GD+ +V++K + G W M +WG W Sbjct: 48 WGNAKATWYGQPNGAGAADNGGACGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPA-CSGNAQTVAITDMNYFPLS--------------QYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQVDLKEAGAGGGRWTPMRESWGSVW 228
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16 Identity = 71/226 (31.42%), Postives = 106/226 (46.90%), Query Frame = 1 Query: 79 AGVILFLVCLMWVADARLPGDYS-----GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSIL-VTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN--LVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNW 699 A + FLV W ++P + G W A AT+YG +G GG CGY ++ + A + +F +GL CG+CFEIKC ++PA C SG P ++ +T N+ P HFDLA F +A+ +AGI+ + +RRV C+ + F + N +LV V G GDI+ V++ KGS T + + +WG W Sbjct: 18 AVALAFLVGGAWCGPPKVPPGKNITAKYGSDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC-DKPAEC-SGKPVVVYITDMNYEP--------------IAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKGCNPNYLALLVKYVDGDGDIVAVDIKEKGSDT-YEPLKHSWGAIW 226
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB9_MAIZE (Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15 Identity = 58/198 (29.29%), Postives = 90/198 (45.45%), Query Frame = 1 Query: 151 GPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVKGSRTG-WMSMSRNWGQNW 699 G W +A AT+YG + +G GGACG N+ Y TA + +F +G CG+C+E++C +P C ++ +T N+ P P HFDL+ F +A+ GI+ V +RRV C+ G + + + N VLV VA GDI+ + ++ + W M +WG W Sbjct: 41 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPE-CSGNPVTVFITDMNY---------------EPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYVAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 222
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB1_MAIZE (Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15 Identity = 58/198 (29.29%), Postives = 90/198 (45.45%), Query Frame = 1 Query: 151 GPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVKGSRTG-WMSMSRNWGQNW 699 G W +A AT+YG + +G GGACG N+ Y TA + +F +G CG+C+E++C +P C ++ +T N+ P P HFDL+ F +A+ GI+ V +RRV C+ G + + + N VLV VA GDI+ + ++ + W M +WG W Sbjct: 41 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPE-CSGNPVTVYITDMNY---------------EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIW 222
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15 Identity = 56/203 (27.59%), Postives = 93/203 (45.81%), Query Frame = 1 Query: 148 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTI--NGFRYFNLVLVTNVAGAGDILRVNVKGSRTG-------WMSMSRNWGQNW 699 G W A AT+YG +G GGACG+ N+ + T+ + +F +G CG+C++I+C +P+ C ++++T N+ P R HFDL+ F +A+ +GI+ + +RRVPC G I F + + VLV GD+++V++ S++ W M +WG W Sbjct: 41 GSGWLPARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPS-CSGNIETVIITDMNYYP--------------VARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYFAVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWGSIW 228
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15 Identity = 57/199 (28.64%), Postives = 87/199 (43.72%), Query Frame = 1 Query: 157 WQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG---GIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTG------WMSMSRNWGQNW 699 W A AT+YG + +G GGACG+ N + T+ + LF +G CGAC++I+C N P+ C ++++T N+ P R HFDL+ F +A AGI+ + +RRVPC +G + VLV G +++++V S W M R+WG W Sbjct: 31 WLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPS-CSGQPRTVIITDMNYYP--------------VARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIW 214 The following BLAST results are available for this feature:
BLAST of FC931219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931219 ID=FC931219; Name=FC931219; organism=Citrus clementina; type=EST; length=699bpback to top |