FC931219

Overview
NameFC931219
Unique NameFC931219
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13042 contig Ccv1_Contig13042:3..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: MPAL1_LOLPR (Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 58/199 (29.15%), Postives = 91/199 (45.73%), Query Frame = 1
Query:  148 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNW 699
            G  W  A +T+YG    +G    GGACGY N+    +   T   +T +F +G  CG+CFEIKC  +P  C   + ++ +T  N                 P  P HFDL+   F  +A+         AG + + +RRV C+     + T +  +  N     +LV  V G GD++ V++K   +  W+ +  +WG  W
Sbjct:   38 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKC-TKPESCSGEAVTVTITDDNE---------------EPIAPYHFDLSGHAFGSMAKKGEEQNVRSAGELELQFRRVKCKYPDDTKPTFHVEKASNPNYLAILVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAVW 220          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15
Identity = 64/199 (32.16%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  148 GGPWQSAHATFYGGSD---ASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTIN----GFRYFNLVLVTNVAGAGDILRVNVKGSRTG-WMSMSRNWGQNW 699
            G  W  A ATFYG +    A    GGACGY ++    +   TA  +  +F +GL C AC+EIKC  EP  C SG P +LV  T+    NY          +    HFDL+   F  +A+        +AG + + +RRV C+   G + T +       ++  +LV   AG G+I+ V++K   +  ++ M  +WG  W
Sbjct:   15 GSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKC-KEPVEC-SGEP-VLVKITD---KNYE---------HIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAVDIKPRDSDEFIPMKSSWGAIW 198          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: MPAP1_PHLPR (Pollen allergen Phl p 1 OS=Phleum pratense GN=PHLPI PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 61/199 (30.65%), Postives = 94/199 (47.24%), Query Frame = 1
Query:  148 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNW 699
            G  W  A +T+YG    +G    GGACGY ++    +   T   +T +F +G  CG+CFEIKC  +P  C SG P ++            +  DN     P  P HFDL+   F  +A+         AG + + +RRV C+   G + T +  +  N     +LV  V G GD++ V++K   +  W+ +  +WG  W
Sbjct:   38 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKC-TKPEAC-SGEPVVV-----------HITDDNE---EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIW 220          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB1_ORYSJ (Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 63/200 (31.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  148 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGY-GVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNW 699
            G  W  A AT+YG    +G    GGACGY ++    + G+N+   +  +F +G  CG+CFEIKC ++P  C      I VT  N  P                  HFDL+   F  +A+        +AGI+   +RRV C+     + T +  +  N     +LV  VAG GD++ V +  KGS   W ++  +WG  W
Sbjct:   38 GDKWLEAKATWYGAPKGAGPKDNGGACGYKDVDKAPFLGMNSCG-NDPIFKDGKGCGSCFEIKC-SKPEACSDKPALIHVTDMNDEP--------------IAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEE-WKALKESWGAIW 220          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXPB4_ARATH (Expansin-B4 OS=Arabidopsis thaliana GN=EXPB4 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 59/191 (30.89%), Postives = 88/191 (46.07%), Query Frame = 1
Query:  163 SAHATFYGGSDASGTMGGACGYGNLYSQG--YGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGG---IRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNWGQNW 699
            +A  T+YG    +G+ GGACGYG+  +    Y + +A    +LFNNG  CG C+++ C   PA   SGSP I VT T+ CP         GG C     H DL+      +A+         AG++ V+Y+R  C  +G     R       Y+   +V    G GD+  V ++ +   ++SM       W
Sbjct:   35 TAGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAG-GPSLFNNGKGCGTCYQVVCIGHPAC--SGSP-ITVTITDECP---------GGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPAGGSFISMQEMRSAVW 212          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: MPAP1_PHAAQ (Major pollen allergen Pha a 1 OS=Phalaris aquatica PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.805e-14
Identity = 63/199 (31.66%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  148 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNW 699
            G  W  A +T+YG    +G    GGACGY ++    +   T   +T +F +G  CG+CFE+KC ++P  C SG P I V  T+          DN     P  P HFDL+   F  +A+         AG + + +RRV C+   G + T +  +  N     +LV  V G GD++ V++K   +  W+ +  +WG  W
Sbjct:   44 GDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKAPFNGMTGCGNTPIFKDGRGCGSCFELKC-SKPESC-SGEP-ITVHITD----------DNE---EPIAPYHFDLSGHAFGSMAKKGEEENVRGAGELELQFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAIW 226          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: MPAH1_HOLLA (Major pollen allergen Hol l 1 OS=Holcus lanatus PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.805e-14
Identity = 57/199 (28.64%), Postives = 91/199 (45.73%), Query Frame = 1
Query:  148 GGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRP-HFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNVK-GSRTGWMSMSRNWGQNW 699
            G  W  A +T+YG    +G    GGACGY ++    +   T   +T +F +G  CG+CFEIKC  +P  C     ++ +T  N                 P  P HFDL+   F  +A+         AG + + +RRV C+   G + T +  +  N     +LV  + G GD++ V++K   +  W+ +  +WG  W
Sbjct:   40 GDEWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKDGRGCGSCFEIKC-TKPESCSGEPVTVHITDDNE---------------EPIAPYHFDLSGHAFGSMAKKGEEQKLRSAGELELKFRRVKCKYPDGTKPTFHVEKGSNPNYLALLVKYIDGDGDVVAVDIKEKGKDKWIELKESWGAVW 222          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 61/200 (30.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query:  148 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGY-GVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKGGIRFTINGFRYFN----LVLVTNVAGAGDILRVNV--KGSRTGWMSMSRNWGQNW 699
            G  W  A  T+YG    +G    GGACGY ++    + G+N+   +  +F +G  CG+CFE+KC ++P  C      I +T  N  P                  HFDL+   F  +A+        +AGI+ + +RRV C+  G  + T +  +  N     VLV  V G GD+++V +  KGS   W  ++ +WG  W
Sbjct:   38 GKQWLEARGTWYGKPKGAGPDDNGGACGYKDIDKAPFLGMNSCG-NDPIFKDGKGCGSCFEVKC-SKPEACSDKPVIIHITDMNTEP--------------IAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEE-WKPLNESWGAIW 220          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXB12_ORYSJ (Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 57/196 (29.08%), Postives = 89/196 (45.41%), Query Frame = 1
Query:  157 WQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAE-------YRAGIVPVSYRRVPCRKKG-GIRFTINGFRYFN--LVLVTNVAGAGDILRVNV----KGSRTGWMSMSRNWGQNW 699
            W +  AT+YG  + +G+ GGACGY     Q  +    AA S  ++++G  CG+C+ + CA   A   SG P + V  T+  P    L     G C     HFD++   F  +A          AG++ + Y RV C   G G+ F ++     N   +LV       D+  V++     G+   W+ M ++WG  W
Sbjct:   39 WSNGIATWYGDPNGAGSEGGACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVCAGNEAC--SGIP-VTVVITDQGPGGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTRVECEWTGVGLTFVVDSGSNPNYLALLVEYDDNDSDLAAVDIMPIGAGASGSWIPMQQSWGAVW 231          
BLAST of FC931219 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.051e-13
Identity = 52/179 (29.05%), Postives = 79/179 (44.13%), Query Frame = 1
Query:  163 SAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCANEPAWCHSGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKKG-GIRFTINGFRY---FNLVLVTNVAGAGDILRVNVKGSRTGWMSMSRNW 687
            ++ AT+YG  D      G CGYG           + +S  L+NNG  CGAC++++C   P   H     + V AT+      +   D   +   P+ +  +A P   +   Y  G+V V Y+R+PCR  G  + + I+   Y   +  +LV  V G  DIL V V      W    + W
Sbjct:   29 NSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPP---HCSEEGVYVVATD------SGEGDGTDFILSPKAYGRMARP-GTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEV------WQEDCKEW 191          
The following BLAST results are available for this feature:
BLAST of FC931219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
MPAL1_LOLPR5.652e-1529.15Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=... [more]
MPAC1_CYNDA5.652e-1532.16Major pollen allergen Cyn d 1 OS=Cynodon dactylon ... [more]
MPAP1_PHLPR7.382e-1530.65Pollen allergen Phl p 1 OS=Phleum pratense GN=PHLP... [more]
EXPB1_ORYSJ9.642e-1531.50Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPB4_ARATH2.148e-1430.89Expansin-B4 OS=Arabidopsis thaliana GN=EXPB4 PE=2 ... [more]
MPAP1_PHAAQ2.805e-1431.66Major pollen allergen Pha a 1 OS=Phalaris aquatica... [more]
MPAH1_HOLLA2.805e-1428.64Major pollen allergen Hol l 1 OS=Holcus lanatus PE... [more]
EXB10_ORYSJ3.664e-1430.50Expansin-B10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXB12_ORYSJ8.162e-1429.08Expansin-B12 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXLB1_ARATH4.051e-1329.05Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 ... [more]

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Properties
Property NameValue
Genbank descriptionC34102G08EF PostHarvP1 Citrus clementina cDNA clone C34102G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931219 ID=FC931219; Name=FC931219; organism=Citrus clementina; type=EST; length=699bp
GAACCAAAACTAACTACACGGAGCTGTGTCTTCTTTGTGAGTGAAGAGAA
TAAAGAAACGATGGCGGTGGTGAATTGGGCTGGCGTTATCCTCTTTTTAG
TATGCTTAATGTGGGTGGCTGATGCAAGACTCCCTGGCGATTACTCCGGT
GGCCCATGGCAAAGCGCCCATGCCACCTTTTACGGCGGCTCTGACGCCTC
CGGTACCATGGGAGGAGCGTGCGGTTACGGTAACTTGTACAGCCAGGGCT
ACGGCGTGAACACAGCGGCGCTGAGCACGGCGCTGTTCAACAATGGCTTG
AGCTGCGGTGCTTGCTTTGAGATCAAGTGTGCAAACGAACCCGCGTGGTG
TCACTCCGGGAGCCCTTCCATTTTGGTTACCGCTACAAACTTTTGCCCGC
CCAATTACGCACTCCCAAGTGACAATGGCGGCTGGTGTAACCCTCCTCGC
CCTCATTTTGACCTCGCCATGCCCATGTTCCTCAAGATTGCTGAGTACCG
CGCCGGCATCGTCCCCGTCTCCTACCGCCGGGTACCATGCCGCAAGAAGG
GAGGAATCAGGTTCACAATAAACGGGTTCCGCTACTTCAACTTGGTTCTG
GTCACCAACGTGGCGGGTGCAGGGGATATCCTGAGGGTGAACGTGAAAGG
GTCAAGAACTGGCTGGATGAGCATGAGCCGTAACTGGGGCCAAAACTGG
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