FC931223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 42/79 (53.16%), Postives = 56/79 (70.89%), Query Frame = 3 Query: 426 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGF 662 +AL L+EE+ RD V ++GE+V Y G+YK++KGL KYGD R+ DTPI E + G+ +GAAM GLRPI E M+M F Sbjct: 38 DALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNF 116
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16 Identity = 47/106 (44.34%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 426 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAF-----------NRSPTLWYAPL 710 EAL ++ ++RD +V + G+D G GG ++ TKGL KYG RV D PIAENS G+G+GAA+ GL+PIVE GF A NRS ++ APL Sbjct: 10 EALNNAMDLALERDQNVVLYGQDAGFEGGVFRATKGLQQKYGSERVWDCPIAENSMAGIGVGAAIGGLKPIVEIQFSGFSFPAMFQIFVHAARIRNRSRGVYTAPL 115
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.832e-16 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 414 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 + + +AL L+EEM +DP V V+GEDVG GG + VT+GL KYG RV+DTP++E + G +G A GLRP+ E ++ F++ Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQ 93 HSP 2 Score: 20.7866 bits (42), Expect = 5.832e-16 Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = 1 Query: 703 LHYTSGGQFT 732 L Y SGGQFT Sbjct: 101 LRYRSGGQFT 110
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.832e-16 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 414 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNR 683 + + +AL L+EEM +DP V V+GEDVG GG + VT+GL KYG RV+DTP++E + G +G A GLRP+ E ++ F++ Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEIQFADYIFPGFDQ 93 HSP 2 Score: 20.7866 bits (42), Expect = 5.832e-16 Identity = 8/10 (80.00%), Postives = 8/10 (80.00%), Query Frame = 1 Query: 703 LHYTSGGQFT 732 L Y SGGQFT Sbjct: 101 LRYRSGGQFT 110
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15 Identity = 37/90 (41.11%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFN 680 ++ + +A+ + L+ E+ RD V V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+TG RP++E +GF+ F+ Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFD 92
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15 Identity = 37/90 (41.11%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFN 680 ++ + +A+ + L+ E+ RD V V GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+TG RP++E +GF+ F+ Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFD 92
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 414 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFL 665 + L EA+ + +++ M++D + V GED G GG ++VT GL KYG+ RV DTPIAE++ G +G A+ GL+PI E GF+ Sbjct: 4 ITLLEAINQAIDQAMEKDESIVVFGEDAGFEGGVFRVTAGLQKKYGETRVFDTPIAESAIVGSAVGMAINGLKPIAEIQFDGFI 87
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15 Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 414 LLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFNRSPT 692 L + +AL GL + + DP V ++GEDVG GG ++VT+GL ++G RV+DTP+AE G IG AM G RP+VE GF+ F++ T Sbjct: 17 LPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITT 109
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15 Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 426 EALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGF 662 EAL ++ ++RDP+V + G+D G GG ++ TKGL KYG+ RV D PIAE + G+G+GAA+ GL+PIVE GF Sbjct: 11 EALGNAMDLALERDPNVVLYGQDAGFEGGVFRATKGLQKKYGEERVWDCPIAEAAMAGIGVGAAIGGLKPIVEIQFSGF 89
BLAST of FC931223 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.952e-14 Identity = 34/90 (37.78%), Postives = 59/90 (65.56%), Query Frame = 3 Query: 411 ELLLFEALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGIGAAMTGLRPIVEGMNMGFLLLAFN 680 ++ + +A+ + L+ E+ D V + GEDVG GG ++VT+GL ++G+ RV DTP+AE+ G+ +G A+ G RP++E +GF+ F+ Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFD 92 The following BLAST results are available for this feature:
BLAST of FC931223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931223 ID=FC931223; Name=FC931223; organism=Citrus clementina; type=EST; length=736bpback to top |