FC931228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_PIG (40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34 Identity = 71/136 (52.21%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GVTV+DV+ Q+F+ A +AFLK+ GKL +P WVDTVK + EL P D +WFY RAA+ ARH+Y+R GVG + K +G + G P+H S SV R+ LQALE + ++E D++ GGR++T GQRDLDRIA Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD-GGRKLTPQGQRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_HUMAN (40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34 Identity = 71/136 (52.21%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GVTV+DV+ Q+F+ A +AFLK+ GKL +P WVDTVK + EL P D +WFY RAA+ ARH+Y+R GVG + K +G + G P+H S SV R+ LQALE + ++E D++ GGR++T GQRDLDRIA Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD-GGRKLTPQGQRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_BOVIN (40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34 Identity = 71/136 (52.21%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GVTV+DV+ Q+F+ A +AFLK+ GKL +P WVDTVK + EL P D +WFY RAA+ ARH+Y+R GVG + K +G + G P+H S SV R+ LQALE + ++E D++ GGR++T GQRDLDRIA Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD-GGRKLTPQGQRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_MYXGL (40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.074e-34 Identity = 71/140 (50.71%), Postives = 94/140 (67.14%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIAKTTV 481 M G TV+DV+ Q+F+ A +AF K+ GKL P WVDTVK EL P D DW+Y+R A+ ARH+YMR VGVG + K +G + G+RP+H+ S +V RK LQ+LE + ++E D GGRR+T GQRD+DRIA V Sbjct: 1 MPGYTVKDVNQQEFVKALAAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKD-PNGGRRLTSIGQRDMDRIAGQVV 139
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.627e-34 Identity = 68/134 (50.75%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 68 GVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 G TV+DV F+ AY++ LKR GK+ +P W D VKT EL P D DW+Y+RAA+ AR +Y+R +GVG R+ +G +K GSRP H +SG + R LQ LE + ++E D KGGRRIT SGQRDLD++A Sbjct: 4 GKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELD-TKGGRRITSSGQRDLDQVA 136
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.656e-34 Identity = 69/134 (51.49%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 68 GVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 G TV+DV F+ AY++ LKR GK+ +P W D VKT EL P D DW+Y+RAA+ AR IY+R +GVG R+ +G +K GSRP H +SG + R LQ LE + ++E D KGGRRIT SGQRDLD++A Sbjct: 4 GKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELD-TKGGRRITSSGQRDLDQVA 136
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_GILMI (40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33 Identity = 70/136 (51.47%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GVTV+DV+ Q+F+ A +AFLK+ GKL +P WVD VK EL P D +WFY+RAA+ RH+Y+R GVG + K +G + G PAH+ + S +V RK LQALE + ++E D GGRR+T G RDLDRIA Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKD-PNGGRRLTAQGTRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.518e-33 Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 68 GVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 G TV+DV +F+ AY+A LKR GK+ +P W D VKT EL P D DW+Y+RAA+ AR +Y+R +GVG R+ +G +K GSRP H +SG V R LQ L+ + +++ D KGGR+IT SGQRDLD++A Sbjct: 4 GKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLD-TKGGRKITSSGQRDLDQVA 136
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_PAGMA (40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.289e-33 Identity = 70/136 (51.47%), Postives = 92/136 (67.65%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GVTV+DV+ Q+F+ A +AFLK+ GKL +P WVD VK EL P D +WFY+R+A+ RH+Y+R GVG + K +GS + G PAH+ S +V RK LQALE + ++E D GGRR+T G RDLDRIA Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKD-PNGGRRLTAQGTRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_ICTPU (40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.296e-33 Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 2 Query: 65 GGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 GGVTV+DV+ Q+F+ A +AFLK+ GKL +P WVD VK + EL P D +WFY+RAA+ RH+Y+R VGVG + K +G K G P+H S +V RK LQALE + ++E D GGRR+T G RDLDRIA Sbjct: 4 GGVTVKDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKD-PNGGRRLTPQGTRDLDRIA 137 The following BLAST results are available for this feature:
BLAST of FC931228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931228 ID=FC931228; Name=FC931228; organism=Citrus clementina; type=EST; length=676bpback to top |