FC931228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_AEQIR (40S ribosomal protein S19 OS=Aequipecten irradians GN=RPS19 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.296e-33 Identity = 68/134 (50.75%), Postives = 90/134 (67.16%), Query Frame = 2 Query: 68 GVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 G++V+DVD+ F A +AFLK+ GK+ IP W +K S NEL P D DWFY RAA+ RH+Y+R GVG L K +G K G+ P+H+ +SGSV R+ LQALE ++E D GGR++T GQ+DLDRIA Sbjct: 2 GISVKDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKD-ANGGRKLTSQGQKDLDRIA 134
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_MYAAR (40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32 Identity = 61/134 (45.52%), Postives = 92/134 (68.66%), Query Frame = 2 Query: 68 GVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 G++V+DV + +F A++AFLK+ GK+ +P W D VKT EL P + DW+++RAA+ RH+Y+R G+G K +G + RG+ P+H A+GS+ R+ LQ+LE + ++E D GGRR+T G+RDLDRIA Sbjct: 2 GISVKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKD-PNGGRRLTSQGRRDLDRIA 134
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19S_ASCSU (40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 2 Query: 74 TVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 +V+DVD + + + FLK+ GK+ +P W D VK + EL P D+DW+YVR A+ AR +Y+R GVG LR+ +G K RG P H ASGSV RKALQ LE I +E + GR +T+ G++DLDRIA Sbjct: 6 SVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDRIA 137
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_DICDI (40S ribosomal protein S19 OS=Dictyostelium discoideum GN=rps19 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.689e-29 Identity = 63/134 (47.01%), Postives = 84/134 (62.69%), Query Frame = 2 Query: 71 VTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIAK 472 VT++DV Q+FI+ Y+ FLK+ G++ IP W D KT+ ELPP + DW Y R A AR +Y+R GV R+ G + G RP H D +G R L+ L+ + V+ETD KGGR IT +G+RDLDRIAK Sbjct: 6 VTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRIAK 139
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19A_DROME (40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a PE=2 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29 Identity = 66/140 (47.14%), Postives = 85/140 (60.71%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIAKTTV 481 M GVTV+D+D A + FLK+ GKL +P +D VKT+ EL P D DWFYVR A+ RH+Y R GVG + K +G K G P+H A+ RKALQALE ++E + GGR+++ GQRDLDRIA V Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPD-GGRKLSSIGQRDLDRIANQIV 139
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19G_ASCSU (40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.211e-27 Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 2 Query: 74 TVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 +V+DVD + + + FLK+ GK+ +P W D K S EL P ++DW+YVR A+ AR +Y+R GV LR +G +K RG P H ASGSV RKALQ LE I ++ + GR +T+ G++DLDRIA Sbjct: 6 SVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIA 137
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_ENTHI (40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.581e-27 Identity = 61/131 (46.56%), Postives = 86/131 (65.65%), Query Frame = 2 Query: 77 VRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 ++DV A FI AY+ LK+ GKL IP WVDTVKT EL P + DW Y+RAAA AR +Y+ +GV LR+A+G N+ P+H SG V+R LQ LEK+G++ + + GR +T+ G++D+D+IA Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIV--GKIQSGRSLTKEGRKDMDKIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_CAEEL (40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26 Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 2 Query: 74 TVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 +++DVD + + + FLK+ GK+ +P W D VK + EL P D DWFY RAA+ ARH+Y R G+G +K +G K RG P H ++G+ RKA+Q LEKI +E + GR +++ G++DLDRIA Sbjct: 6 SIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFR-PAGIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIA 136
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19B_DROME (40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.524e-25 Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIAKTTV 481 M GVTV+++D +AFLK+ GK+ +P +KT E P D DWFY R A+ RH+Y+R GVG K + K G RP+ H +S RKALQALE ++E + GGR++T GQR+LDRIA V Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPD-GGRKLTPQGQRNLDRIANKIV 139
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19E_METJA (30S ribosomal protein S19e OS=Methanocaldococcus jannaschii GN=rps19e PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.344e-25 Identity = 64/134 (47.76%), Postives = 79/134 (58.96%), Query Frame = 2 Query: 71 VTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIAK 472 VTV DV A K I + LK + +P WVD VKT S E P DW+Y+R A+ R IY+ VGV RLR A+G KNRG P H SG++ RKALQ LEK+G++E E GR +T G+ LD IAK Sbjct: 2 VTVYDVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPE--GRVVTPKGRSFLDNIAK 132 The following BLAST results are available for this feature:
BLAST of FC931228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931228 ID=FC931228; Name=FC931228; organism=Citrus clementina; type=EST; length=676bpback to top |