FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_DESOH (10 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 293 KPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +PL DR+LVK E KT GGI +P TA+ KP G+V+AVG G+ KL + VK G +V++ KY GTE++ +G +LI+REDD++GILE Sbjct: 4 RPLHDRILVKRVEEETKTKGGIIIPDTAKEKPIEGKVMAVGNGRLGEDGKLIPLEVKKGDRVLFGKYGGTEVKMDGQEYLIMREDDILGILE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_DESMR (10 kDa chaperonin OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18 Identity = 45/93 (48.39%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KPLGDRVLVK EE T GGI +P +A+ KP GEV+AVG GK K L + V+ G V+++KYAGTE++ + + L++REDD++ ++E Sbjct: 3 LKPLGDRVLVKRLEQEEVTKGGIIIPDSAKEKPMKGEVIAVGPGKLAEDGKHLKMHVEKGDLVLFNKYAGTEIKVDDEDFLVMREDDILAVIE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH102_RHILO (10 kDa chaperonin 2 OS=Rhizobium loti GN=groS2 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18 Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 + +PL DR+LV+ EEKT GGI +P TA+ KPQ GEV+A+G G KL + VK G ++++ K++GTE++ NG + LI++E DV+G++E Sbjct: 2 TFRPLHDRILVRRIEAEEKTAGGIIIPDTAKEKPQEGEVIAIGPGARDESGKLTPLDVKAGDRILFGKWSGTEIKLNGEDLLIMKESDVMGVIE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LEPIN (10 kDa chaperonin OS=Leptospira interrogans GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ G+VV +G GK + + VK G V+Y KY+GTE++ G +LI+RE D++ +++ Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLIPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAVVK 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LEPIC (10 kDa chaperonin OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=groS PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ G+VV +G GK + + VK G V+Y KY+GTE++ G +LI+RE D++ +++ Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLIPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAVVK 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CORDI (10 kDa chaperonin OS=Corynebacterium diphtheriae GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +IKPL DRVLV+I E T G+ +P +A+ KPQ G VVA G G+ G ++ + +K G V++SKY GTEL++NG +L+L DV+ I+E Sbjct: 5 NIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIE 97
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_SYMTH (10 kDa chaperonin OS=Symbiobacterium thermophilum GN=groS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17 Identity = 46/95 (48.42%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTV-GKTKLDISVKPGTQVIYSKYAGTELEFNGANHLIL-REDDVVGILE 565 ++KPLG RV++K EE+T GI LP TA+ KPQ G+V+AVG G+T+ TK+++ VK G VI+SKYAGTE++ +G ++IL E D++ I++ Sbjct: 2 NVKPLGARVVIKPLEKEERTKSGIVLPDTAKEKPQQGKVIAVGPGRTLESGTKVELEVKEGDTVIFSKYAGTEVKIDGEEYIILDGERDILAIVQ 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LEPBL (10 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=groS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ G+VV +G GK + + VK G V+Y KY+GTE++ G +LI+RE D++ +++ Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLVPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAVVK 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LEPBJ (10 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=groS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 SIKPLGDRVLV+ + E+ G IF+P TA+ KPQ G+VV +G GK + + VK G V+Y KY+GTE++ G +LI+RE D++ +++ Sbjct: 3 SIKPLGDRVLVEPRQEAEEKIGSIFVPDTAKEKPQEGKVVEIGSGKYEDGKLVPLEVKVGDTVLYGKYSGTEIKSEGKEYLIIRESDILAVVK 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_ACIF5 (10 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=groS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17 Identity = 42/93 (45.16%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PL DRV+++ E+KT GGI +P TA+ KP GE+VA G GK + K+ + VK G QV+++KYAGTE++ G L++REDD++ ++E Sbjct: 3 LRPLHDRVVIRRLEEEQKTAGGIIIPDTAKEKPVRGEIVAAGHGKILEDGKVRALDVKTGDQVLFAKYAGTEIKVEGEELLVMREDDIMAVIE 95 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |