FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_SYNS3 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9311) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17 Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDRV VKI EEKT GGI LP TA+ KPQ GEVV VG GK+ ++ V G +V+YSKYAGT+++ +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKISESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKSNDDGSRQAPEVGIGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_SPHWW (10 kDa chaperonin OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17 Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 S +PL DRVLV+ EEKT GGI +P +A+ KPQ GEVVAVG G K+ + VK G ++++ K++GTE++ NG + LI++E D++GI+ Sbjct: 2 SFRPLHDRVLVRRVEAEEKTAGGIIIPDSAKEKPQEGEVVAVGGGSKAEDGKVTPLDVKAGDKILFGKWSGTEVKINGEDLLIMKESDILGIV 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_GEOBB (10 kDa chaperonin OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17 Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +++PL DR++VK T GG+++P TA+ KPQ GEVVAVG GK K+ I +K G +V++ KYAG+E++ G + LI+REDD++G++E Sbjct: 2 NLRPLQDRIIVKRVEEATMTAGGLYIPETAKEKPQQGEVVAVGNGKRGEDGKVYPIDLKVGDKVLFGKYAGSEVKLEGEDFLIMREDDILGVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_DESAH (10 kDa chaperonin OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17 Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 S++PL DR+LV+ EKT GGI +P TA+ KP G+VVA G G+ KL + +K G +++SKY GTE++ +G ++LI+R+DDV+G++E Sbjct: 2 SLRPLQDRILVERVQETEKTKGGIIIPDTAKEKPAEGKVVASGNGRVGEDGKLIPMDLKVGDTILFSKYGGTEVKIDGTDYLIMRQDDVLGVIE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CAUCR (10 kDa chaperonin OS=Caulobacter crescentus GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17 Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 293 KPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +PLGDRVLVK E KT GGI +P TA+ KPQ GEVVAVG G K + + VK G ++++ K++GTE++ +G + LI++E DV+G++E Sbjct: 4 RPLGDRVLVKRVEEETKTKGGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLGVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CAUCN (10 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=groS PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17 Identity = 45/92 (48.91%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 293 KPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +PLGDRVLVK E KT GGI +P TA+ KPQ GEVVAVG G K + + VK G ++++ K++GTE++ +G + LI++E DV+G++E Sbjct: 4 RPLGDRVLVKRVEEETKTKGGIIIPDTAKEKPQEGEVVAVGPGARNDKGDVVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLGVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BACV8 (10 kDa chaperonin OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=groS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17 Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +IKPL DRVL+ EEKT GGI +P TA+ KP GEVVA+G G + L + G QV+Y KY+GTELE +G +LI+R+ DV+ +L Sbjct: 2 NIKPLADRVLILPAPAEEKTIGGIIIPDTAKEKPLQGEVVAIGNGTKDEEMVLHV----GDQVLYGKYSGTELEHDGKKYLIMRQSDVLAVL 89
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_SYNS9 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9902) GN=groS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ +++L E D++ I+ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAIV 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_SYNPW (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) GN=groS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17 Identity = 44/94 (46.81%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_SYNP6 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK ++ VK G +V+YSKYAGT+++ ++++L E D++ ++ Sbjct: 9 STVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |