FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_HALHL (10 kDa chaperonin OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 SI+PL DRV+++ E + GGI +P TA KP G+V+AVG GKT+ + + V G QV++ KYAGTE++ +G ++L++REDD++ + E Sbjct: 2 SIRPLHDRVVIQRLEEERTSPGGIVIPDTAAEKPMKGKVIAVGHGKTLDNGERRPVEVNVGDQVLFGKYAGTEVKIDGQDYLVMREDDIMAVFE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CAUSK (10 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 293 KPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +PLGDRVLVK E KT GGI +P T + KPQ GEVVAVG G K + + VK G ++++ K++GTE++ +G + LI++E DV+GI+E Sbjct: 4 RPLGDRVLVKRVEEETKTKGGIIIPDTVKEKPQEGEVVAVGPGARNDKGDIVALDVKAGDRILFGKWSGTEVKVDGQDLLIMKESDVLGIVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BARBK (10 kDa chaperonin OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=groS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17 Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 T +PL DRV+V+ E KT GGI +P TAQ KPQ GEV+AVG G ++ + VK G ++++ K++GTE++ NG LI++E D++GIL Sbjct: 4 TKFRPLHDRVVVRRVESENKTAGGIIIPDTAQEKPQEGEVIAVGNGVLNDNGQRVSLEVKEGDRILFGKWSGTEVKINGEELLIMKESDIMGIL 97
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH101_RHIME (10 kDa chaperonin 1 OS=Rhizobium meliloti GN=groS1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.624e-17 Identity = 42/94 (44.68%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 T+ +PL DRV+V+ EEKT GGI +P TA+ KPQ GE+VAVG G K + + VK G ++++ K++GTE++ NG + LI++E D++G++ Sbjct: 4 TNFRPLHDRVVVRRVESEEKTKGGIIIPDTAKEKPQEGEIVAVGSGARDESGKVVPLDVKAGDRILFGKWSGTEVKINGEDLLIMKEADIMGVI 97
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_SYNSC (10 kDa chaperonin OS=Synechococcus sp. (strain CC9605) GN=groS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GEVV VG GK ++ V G V+YSKYAGT+++ +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDNVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STRAL (10 kDa chaperonin OS=Streptomyces albus G GN=groS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +IKPL DR++V+ E+ T G+ +P TA+ KPQ G V+AVG G+ +L + VK G V+YSKY GTE+++NG +L+L DV+ I+E Sbjct: 9 AIKPLEDRIVVQPLDAEQTTASGLVIPDTAKEKPQEGVVLAVGPGRFENGERLPLDVKTGDVVLYSKYGGTEVKYNGEEYLVLSARDVLAIIE 101
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PROMM (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9313) GN=groS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ + +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLSTDEYVLLSEKDILAVV 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PROM9 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9312) GN=groS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G +++L E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PROM2 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9215) GN=groS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G +++L E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PROM0 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9301) GN=groS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G +++L E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |