FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CLOTH (10 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groS PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20 Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +I+PLGDRV+VK+ EE T GI LP +A+ KPQ EVVAVG G V ++ + VK G +VI SKYAGTE++F+G + ILR++D++ ++E Sbjct: 2 NIRPLGDRVVVKMVETEETTKSGIVLPGSAKEKPQVAEVVAVGPGTVVDGKEVKMEVKVGDKVIISKYAGTEVKFDGQEYTILRQNDILAVVE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CYAP7 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7424) GN=groS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20 Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 553 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GEVVAVG GK ++ I VK G +V+YSKYAGT+++ G ++++L E D++ Sbjct: 9 STVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDIL 99
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CLOBB (10 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20 Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 IKPLG+RV++K EEKT GI L +A+ PQ EVVAVG G V TK+++ VK G +V+YSKY+GTE++ +G ++IL++DD++ I+E Sbjct: 3 IKPLGNRVVIKKLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSIVDGTKIEMEVKVGDKVLYSKYSGTEVKLDGEEYMILKQDDILAIVE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CLOBA (10 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20 Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 IKPLG+RV++K EEKT GI L +A+ PQ EVVAVG G V TK+++ VK G +V+YSKY+GTE++ +G ++IL++DD++ I+E Sbjct: 3 IKPLGNRVVIKRLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSIVDGTKIEMEVKVGDKVLYSKYSGTEVKLDGEEYMILKQDDILAIVE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CHLP8 (10 kDa chaperonin OS=Chlorobaculum parvum (strain NCIB 8327) GN=groS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 ++KPL DRV+VK EEKT GG+++P T + KPQ GEVVAVGEGK +L + VK G +V+Y KY+GTE++ ++LI+RE D+ IL Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGEGKVADNGQLVQMQVKVGDKVLYGKYSGTEVQVEAEDYLIMRESDIFAIL 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_SYNP2 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 47/91 (51.65%), Postives = 68/91 (74.73%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVV 553 +++KPLGDRV VK+ EEKT GGI LP +A+ KPQ GEVVAVGEGK ++ + VK G +V+YSKYAGT+++ +G ++++L E D++ Sbjct: 9 STLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLSGDDYVLLSEKDIL 99
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CALS8 (10 kDa chaperonin OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=groS PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 I+P+GDR+L+K K EE T GI LP T + KPQ EV+ VG G V K+++ VK G +VI SKYAGTE++ +G + I+R+DDV+ I+E Sbjct: 3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGIVDGEKVEMVVKKGDKVIVSKYAGTEIKIDGEEYTIIRQDDVLAIIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_ANATD (10 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groS PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 I+P+GDR+L+K K EE T GI LP T + KPQ EV+ VG G V K+++ VK G +VI SKYAGTE++ +G + I+R+DDV+ I+E Sbjct: 3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGIVDGEKVEMVVKKGDKVIVSKYAGTEIKIDGEEYTIIRQDDVLAIIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_OCEIH (10 kDa chaperonin OS=Oceanobacillus iheyensis GN=groS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 IKPLGDRV++++ EE T GI LP +A+ KPQ G+VVAVG G+ K+ + V G ++I+SK+AGTE+++ G +LILRE+D++ I+ Sbjct: 2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRVENGEKIALEVSEGDRIIFSKFAGTEVKYEGTEYLILRENDILAII 92
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 45/95 (47.37%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ GE+V VG GK ++ + VK G +V+YSKYAGT+++ G ++++L E D++ +++ Sbjct: 9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRSEPEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDILAVVD 103 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |