FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_NOVAD (10 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 39/93 (41.94%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 + +PL DRVLV+ EEKT GGI +P +A+ KP G VVAVG G + T + VK +V++ K++GTE++ +G + LI++E D++G++ Sbjct: 2 TFRPLHDRVLVRRVEAEEKTAGGIIIPDSAKEKPAEGIVVAVGSGARAENGTITPLDVKANDRVLFGKWSGTEVKVDGEDLLIMKESDILGVI 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_DECAR (10 kDa chaperonin OS=Dechloromonas aromatica (strain RCB) GN=groS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +I+PL DRV+VK E T GI +P +A KP GEV+AVG GK K + + VK G +V++ KYAG ++ +G L++RE+D++G+L Sbjct: 2 NIRPLHDRVIVKRVEAERTTASGIVIPDSAGEKPDQGEVLAVGPGKRDDNGKQIALDVKVGDRVLFGKYAGQAVKVDGQEVLVMREEDIMGVL 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BIFLO (10 kDa chaperonin OS=Bifidobacterium longum GN=groS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 37/92 (40.22%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 + PL D+++VK + +T G+++P A+ KPQ GEV+AVG G+ K ++ + VK G +V+YSKY GTE+ + G ++LI+ D++ IL Sbjct: 5 LTPLEDKIIVKQAEAQTQTASGLYIPDNAKEKPQQGEVLAVGPGRRDDKGERIPMDVKVGDKVLYSKYGGTEVHYEGEDYLIVGARDILAIL 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BIFLI (10 kDa chaperonin OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=groS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 37/92 (40.22%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 + PL D+++VK + +T G+++P A+ KPQ GEV+AVG G+ K ++ + VK G +V+YSKY GTE+ + G ++LI+ D++ IL Sbjct: 5 LTPLEDKIIVKQAEAQTQTASGLYIPDNAKEKPQQGEVLAVGPGRRDDKGERIPMDVKVGDKVLYSKYGGTEVHYEGEDYLIVGARDILAIL 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BIFLD (10 kDa chaperonin OS=Bifidobacterium longum (strain DJO10A) GN=groS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 37/92 (40.22%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 + PL D+++VK + +T G+++P A+ KPQ GEV+AVG G+ K ++ + VK G +V+YSKY GTE+ + G ++LI+ D++ IL Sbjct: 5 LTPLEDKIIVKQAEAQTQTASGLYIPDNAKEKPQQGEVLAVGPGRRDDKGERIPMDVKVGDKVLYSKYGGTEVHYEGEDYLIVGARDILAIL 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_XANOP (10 kDa chaperonin OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=groS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDIS-VKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 SIKPL DRV+VK +E + GGI +P +A+ K GEVVA+G GK + L VK G +VIY +YAG+ + G + +LREDD++ ++ Sbjct: 2 SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_XANOM (10 kDa chaperonin OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=groS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDIS-VKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 SIKPL DRV+VK +E + GGI +P +A+ K GEVVA+G GK + L VK G +VIY +YAG+ + G + +LREDD++ ++ Sbjct: 2 SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_XANCP (10 kDa chaperonin OS=Xanthomonas campestris pv. campestris GN=groS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDIS-VKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 SIKPL DRV+VK +E + GGI +P +A+ K GEVVA+G GK + L VK G +VIY +YAG+ + G + +LREDD++ ++ Sbjct: 2 SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_XANCH (10 kDa chaperonin OS=Xanthomonas campestris pv. phaseoli GN=groS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDIS-VKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 SIKPL DRV+VK +E + GGI +P +A+ K GEVVA+G GK + L VK G +VIY +YAG+ + G + +LREDD++ ++ Sbjct: 2 SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_XANCB (10 kDa chaperonin OS=Xanthomonas campestris pv. campestris (strain B100) GN=groS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDIS-VKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 SIKPL DRV+VK +E + GGI +P +A+ K GEVVA+G GK + L VK G +VIY +YAG+ + G + +LREDD++ ++ Sbjct: 2 SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVI 94 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |