FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_VARPS (10 kDa chaperonin OS=Variovorax paradoxus (strain S110) GN=groS PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PL DRV+VK E KT GI +P A KP GEV+AVG GK K L ++VK G +V++ KY+G ++ +G L+++EDD+ ++E Sbjct: 3 LRPLADRVIVKRVDSETKTASGIVIPDAAAEKPDQGEVLAVGPGKRTEKGDLTALTVKVGDRVLFGKYSGQTVKVDGDELLVMKEDDLFAVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_ANASL (10 kDa chaperonin OS=Anabaena sp. (strain L31) GN=groS PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13 Identity = 38/94 (40.43%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 284 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 +++KPLGDRV VK+ + EK ++ P TA+ KPQ GEVVA+G GK ++ ++ VK G ++YSKYAGT+++ +++L E D++ ++ Sbjct: 9 STVKPLGDRVFVKV-SASEKRPRRLYFPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDLLLYSKYAGTDVKLGTEEYVLLSEKDILAMV 101
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_THEMA (10 kDa chaperonin OS=Thermotoga maritima GN=groS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13 Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 2 Query: 296 PLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 PLG+R+L+K E+KT+GGI LP +A+ KP EVVAV GK K DI V G +VIYSKYAGTE++ + +++I+ +D++ +E Sbjct: 6 PLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAV--GKIDDDEKFDIKV--GDKVIYSKYAGTEIKIDDEDYIIIDVNDILAKIE 91
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BURPP (10 kDa chaperonin OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=groS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13 Identity = 37/94 (39.36%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +++PL DRV+VK E KT GI +P A KP GE++AVG GK K ++ + VK G +V++ KYAG ++ +G L++RE+D++ +++ Sbjct: 2 NLRPLHDRVIVKRLDQETKTASGIVIPEAAAEKPDQGEILAVGPGKRDDKGAQIALDVKVGDRVLFGKYAGQTVKVDGNELLVMREEDIMAVVQ 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_WOLPM (10 kDa chaperonin OS=Wolbachia pipientis wMel GN=groS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 37/94 (39.36%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 S+ L D VL IK + E+ GGI LPS+A+ KP GEV+A+GEG + ++ ++VK G +V Y ++AGTE+E N ++++E D++ +++ Sbjct: 5 SLNVLDDSVL--IKPISEEKQGGIVLPSSAEKKPTKGEVIAIGEGSRNSSGERVTLTVKAGDKVFYRQWAGTEIEHNNEKLIVMKESDILAVIK 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_THENE (10 kDa chaperonin OS=Thermotoga neapolitana GN=groS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 296 PLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 PLG+R+L+K E+KT+GGI LP +A+ KP EVVAV GK + K DI V G +VI+SKYAGTE++ + +++I+ +D++ +E Sbjct: 6 PLGERLLIKPIKEEKKTEGGIVLPDSAKEKPMKAEVVAV--GKIEDEEKFDIKV--GDKVIFSKYAGTEIKIDDEDYIIIDVNDILAKIE 91
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_RENSM (10 kDa chaperonin OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 SIKPL DR++V+ E+ T G+ +P +A+ KPQ GEVVAVG G+ ++ + V G V+YSKY GTE++ G L+L DV+ I+ Sbjct: 4 SIKPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVKTGGEELLVLSARDVLAIV 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_JANMA (10 kDa chaperonin OS=Janthinobacterium sp. (strain Marseille) GN=groS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 36/94 (38.30%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +++PL DRV+VK E KT G+ +P A KP GE++A+G GK + K+ + VK G +V++ KYAG ++ +G L++RE+D++ I++ Sbjct: 2 NLRPLHDRVIVKRLDQETKTASGLIIPEAAAEKPDQGEILAIGNGKILEDGKVRPLDVKVGDRVLFGKYAGQTVKVDGNEVLVMREEDIMAIVQ 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_BIFA0 (10 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=groS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 + PL D+++VK E +T G+ +P A+ KPQ GEV+AVG G+ + K + + VK G +V+YSKY GTE+ F G +LI+ D++ ++ Sbjct: 5 LTPLEDKIIVKQAEAETQTASGLIIPDNAKEKPQQGEVLAVGPGRRDDEGKRVPMDVKVGDKVLYSKYGGTEVHFKGEEYLIVSARDLLAVV 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_ACIAC (10 kDa chaperonin OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=groS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.818e-13 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDI-SVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 S++PL DRV+VK E T GI +P A KP G V+AVG GK K +L + SVK G +V++ KY+G ++ NG L+++EDD+ ++E Sbjct: 2 SLRPLHDRVIVKRIESETTTASGIVIPDNAAEKPDQGVVLAVGPGKKNDKGELSVLSVKVGDRVLFGKYSGQTVKVNGDELLVMKEDDLFAVVE 95 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |