FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAAB (10 kDa chaperonin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAA9 (10 kDa chaperonin OS=Staphylococcus aureus (strain JH9) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAA8 (10 kDa chaperonin OS=Staphylococcus aureus (strain NCTC 8325) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAA3 (10 kDa chaperonin OS=Staphylococcus aureus (strain USA300) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAA2 (10 kDa chaperonin OS=Staphylococcus aureus (strain JH1) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAA1 (10 kDa chaperonin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13 Identity = 34/93 (36.56%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KP+G+RV+++ K E+ T GI L +A+ K G +VAVG G+ + T++ VK G +V++ +YAGTE++ + +L+L E+D++ ++E Sbjct: 2 LKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_RHOFD (10 kDa chaperonin OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.910e-13 Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PL DRV+VK E KT GI +P +A KP GEV+AVG GK K ++ ++VK G +V++ KY+G ++ G L+++EDD+ ++E Sbjct: 3 LRPLHDRVIVKRVENETKTASGIVIPDSAAEKPDQGEVLAVGPGKKNDKGEISPMAVKVGDRVLFGKYSGQTVKVAGDELLVMKEDDLFAVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_THICR (10 kDa chaperonin OS=Thiomicrospira crunogena (strain XCL-2) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13 Identity = 39/95 (41.05%), Postives = 64/95 (67.37%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHL-ILREDDVVGILE 565 +IKPL DRV+V+ ++++ GGI LP +AQ K GEVVAVG GK + + ++VK G +V++ +Y+G E++ + L ++REDD++ I+E Sbjct: 2 NIKPLHDRVVVRQVEEQKESTGGILLPGSAQEKENLGEVVAVGPGKAADNGSIIPMTVKVGDKVMFGQYSGQEVKDDAGKPLKVMREDDIIAIVE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_MARMS (10 kDa chaperonin OS=Marinomonas sp. (strain MWYL1) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13 Identity = 38/94 (40.43%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLD-ISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +I+PL DRV+V+ K E T GI LP +A+ KP GEV+AVG G+ + ++VK G V++ +Y+G ++ G LI++ED++ GI+E Sbjct: 2 NIRPLHDRVVVRRKEEETTTASGIVLPGSAKEKPTQGEVLAVGTGRIQSNGDVQALAVKVGDTVLFGQYSGQTVKIEGDELLIMKEDEIYGIVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_TREPS (10 kDa chaperonin OS=Treponema pallidum subsp. pallidum (strain SS14) GN=groS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.179e-12 Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 I PL DRVLVK E KT GI +P TAQ K Q+G V+AVG K+ +SV G +V++ KYAG ++ +G HL+L+ D++ ++E Sbjct: 3 IIPLADRVLVKTDKSETKTASGIIIPDTAQEKMQSGTVIAVGS----DSEKIKVSV--GQRVMHDKYAGNPVKIDGEEHLLLKGADILAVIE 88 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |