FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_METPP (10 kDa chaperonin OS=Methylibium petroleiphilum (strain PM1) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++PL DRV+VK E KT GI +P A KP GEV+AVG GK K + ++ K G +V++ KY+G ++ +G L++RE+D+ ++E Sbjct: 3 LRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFIALNCKVGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_COLP3 (10 kDa chaperonin OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELE-FNGANHLILREDDVVGILE 565 SI+PL DRV+VK K VE K+ GGI L +A K GEV+AVG G+ + ++ + VK G QVI+S+ G + E +G LIL E D++ I+E Sbjct: 2 SIRPLHDRVIVKRKKVESKSAGGIVLTGSAAEKSTRGEVIAVGNGRILENGEVRPLDVKVGDQVIFSEGYGVKTEKIDGEEVLILSESDILAIVE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_WOLPP (10 kDa chaperonin OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12 Identity = 34/94 (36.17%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEG-KTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 ++ L D VL IK + E+ GGI LPS+A+ KP GEV+A+G G + ++ ++VK G +V Y ++AGTE+E + +++++E D++ +++ Sbjct: 5 NLNVLDDNVL--IKPITEEKQGGIVLPSSAEKKPTKGEVIAIGSGSRNSSGERIALTVKTGDKVFYRQWAGTEVEHDNEKYVVMKESDLLAVIK 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_VESOH (10 kDa chaperonin OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 38/96 (39.58%), Postives = 64/96 (66.67%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK--TVGKT-KLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +I+PL DRV+V+ ++ T G+ +P +A KP G VVAVG GK G T LD+++ G +V++++YAGTE++ +G LI++E D+V +++ Sbjct: 2 NIRPLHDRVVVRRVEEKKTTSSGLIIPDSATEKPSEGVVVAVGNGKKNDNGDTIALDVTI--GNKVLFAQYAGTEIKVDGKKLLIMKEGDIVAVIK 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_THEAB (10 kDa chaperonin OS=Thermosipho africanus (strain TCF52B) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 35/90 (38.89%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 296 PLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 PLG R+L+K E++T+GGI LP TA+ KP E+VAVG + D+ + G +VI+SKY+GTE++ +++I+ +D++ +E Sbjct: 5 PLGSRLLIKPIQEEKRTEGGIVLPDTAKEKPMKAEIVAVGNLEDA-----DVDLHVGDKVIFSKYSGTEIKIEEEDYIIIDVEDILAKIE 89
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CHLTB (10 kDa chaperonin OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 IKPLGDR+LVK + GGI LP TA+ K EVVA+G GK K +L V+ G V+ KY+G EL G ++I++ +V+ +L+ Sbjct: 10 IKPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVVALGTGKKDDKGQQLPFEVQVGDIVLIDKYSGQELTVEGEEYVIVQMSEVIAVLQ 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CHLT2 (10 kDa chaperonin OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 IKPLGDR+LVK + GGI LP TA+ K EVVA+G GK K +L V+ G V+ KY+G EL G ++I++ +V+ +L+ Sbjct: 10 IKPLGDRILVKREEEASTARGGIILPDTAKKKQDRAEVVALGTGKKDDKGQQLPFEVQVGDIVLIDKYSGQELTVEGEEYVIVQMSEVIAVLQ 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_VEREI (10 kDa chaperonin OS=Verminephrobacter eiseniae (strain EF01-2) GN=groS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +++PL DRV+VK E T GI +P A KP GEV+AVG GK K +L ++VK G +V++ KY+G ++ + L+++EDD+ ++E Sbjct: 2 NLRPLHDRVIVKRIESETTTASGIVIPDNAAEKPDQGEVLAVGPGKKNDKGELIALNVKVGDRVLFGKYSGQTVKVHRDELLVMKEDDLFAVVE 95
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_STAEP (10 kDa chaperonin OS=Staphylococcus epidermidis GN=groS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 33/93 (35.48%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 +KPLG+RV+++ K E+ GI L +A+ K G ++AVG+G+ + T++ V G +++ +YAGTE++ +LIL E+D++ I+E Sbjct: 2 LKPLGNRVIIEKKEQEQAAKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGAQTYLILNEEDILAIIE 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PSEMY (10 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 35/94 (37.23%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG GK + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNQGEVVAVGTGKVLENGEVRPLAVKVGDKVVFGPYSGSNTVKVDGEDLLVMGENEILAVIE 96 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |