FC931232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PSEAB (10 kDa chaperonin OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 35/94 (37.23%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G L++ E +++ +LE Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PSEA8 (10 kDa chaperonin OS=Pseudomonas aeruginosa (strain LESB58) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 35/94 (37.23%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G L++ E +++ +LE Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PSEA7 (10 kDa chaperonin OS=Pseudomonas aeruginosa (strain PA7) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 35/94 (37.23%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G L++ E +++ +LE Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNAIKVDGEELLVMGESEILAVLE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CHLPN (10 kDa chaperonin OS=Chlamydia pneumoniae GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 IKPLGDR+LVK + E GGI LP TA+ K EV+ +G GK T T L V+ G ++ KYAG E+ + ++IL+ +++ +L+ Sbjct: 10 IKPLGDRILVKREEEEATARGGIILPDTAKKKQDRAEVLVLGTGKRTDDGTLLPFEVQVGDIILMDKYAGQEITIDDEEYVILQSSEIMAVLK 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_CHLCV (10 kDa chaperonin OS=Chlamydophila caviae GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 565 IKPLGDR+LVK + + GGI LP TA+ K EV+ +G GK L V G V+ KYAG EL +G ++I++E +V+ +L+ Sbjct: 10 IKPLGDRILVKREEEDSTARGGIILPDTAKKKQDRAEVLVLGTGKRDKDGNVLPFEVTVGDTVLIDKYAGQELTVDGEEYVIVQESEVMAVLK 102
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PSEST (10 kDa chaperonin OS=Pseudomonas stutzeri GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 34/94 (36.17%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PSEPW (10 kDa chaperonin OS=Pseudomonas putida (strain W619) GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 34/94 (36.17%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILDNGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVVE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_PSEPG (10 kDa chaperonin OS=Pseudomonas putida (strain GB-1) GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 34/94 (36.17%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLILREDDVVGILE 565 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILENGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVIE 96
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_LEPCP (10 kDa chaperonin OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 2 Query: 290 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTK-LDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 562 ++PL DRV+VK E KT GI +P A KP GEV+AVG GK K + ++V G +V++ KY+G ++ +G L++RE+D+ ++ Sbjct: 3 LRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFVALNVAVGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVV 94
BLAST of FC931232 vs. ExPASy Swiss-Prot
Match: CH10_COLMA (10 kDa chaperonin OS=Colwellia maris GN=groS PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 2 Query: 287 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKL-DISVKPGTQVIYSKYAGTELE-FNGANHLILREDDVVGILE 565 SI+PL DRV+VK K E K++GGI L +A K EV+AVG G+ + ++ + VK G QVI+S+ G + E +G LIL E D++ I+E Sbjct: 2 SIRPLHDRVIVKRKDAESKSEGGIVLMGSATEKSTRAEVIAVGNGRILENGEVRPLDVKVGDQVIFSEGYGVKTEKIDGEEVLILSESDILAIVE 96 The following BLAST results are available for this feature:
BLAST of FC931232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 492
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931232 ID=FC931232; Name=FC931232; organism=Citrus clementina; type=EST; length=702bpback to top |