FC931234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.052e-36 Identity = 73/154 (47.40%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 197 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINRVLLKL 658 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI+R +++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154 HSP 2 Score: 39.2762 bits (90), Expect = 3.052e-36 Identity = 17/27 (62.96%), Postives = 24/27 (88.89%), Query Frame = 1 Query: 640 QGTVEIITPVELIRKGDKVGSSEAALL 720 +GT+EI++ V+LI+ GDKVG+SEA LL Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLL 175
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.531e-35 Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 2 Query: 206 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINRVLLKLS 661 K+ K Y KL LLE+Y I + + DNV S Q+ IR+ LRG++VVLMGKNTM++R ++ T + L+P ++GNVG +FT GDL APAR G +AP DV +P GNTG++P +TSFFQ L +PTKI R ++++ Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPE--YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEIT 153 HSP 2 Score: 33.113 bits (74), Expect = 2.531e-35 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 640 QGTVEIITPVELIRKGDKVGSSEAALL 720 +GT+EI T ++L+ G KVG SEA LL Sbjct: 147 RGTIEITTDLKLVEAGAKVGPSEATLL 173
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.236e-34 Identity = 68/152 (44.74%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 206 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINRVLLKLS 661 K+ K Y KL LLEEY I + + DNV S Q+ IR+ LR VVLMGKNTM++R ++ + + L+P ++GNVG +FT GDL APAR G VAP+DV +P GNTG++P +TSFFQ L +PTKI R ++++ Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFL--VDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEIT 153 HSP 2 Score: 33.113 bits (74), Expect = 1.236e-34 Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 640 QGTVEIITPVELIRKGDKVGSSEAALL 720 +GT+EI T ++L+ G KVG SEA LL Sbjct: 147 RGTIEITTDLKLVEAGAKVGPSEATLL 173
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.626e-31 Identity = 67/149 (44.97%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 212 EKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINRVLLKL 658 EKK Y AKL + LEEY + V DNV S Q+ +R+ LRG +VVLMGKNTM++R IR + F L+P ++G VG +FT L APAR G VAP D+ V NTG++P +TSFFQ L +PTKI R +++ Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPD--FEKLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPGKTSFFQALGVPTKIARGTIEI 152 HSP 2 Score: 34.2686 bits (77), Expect = 2.626e-31 Identity = 14/27 (51.85%), Postives = 23/27 (85.19%), Query Frame = 1 Query: 640 QGTVEIITPVELIRKGDKVGSSEAALL 720 +GT+EI++ V+++ G+KVG SEA+LL Sbjct: 147 RGTIEIVSDVKVVDAGNKVGQSEASLL 173
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28 Identity = 67/171 (39.18%), Postives = 104/171 (60.82%), Query Frame = 2 Query: 191 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGA-PARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINRVLLKLS---HLWSLSGRVT 691 + K SK +KK Y KL L+++Y++IL+ DNVGSNQ+ ++R+ LRG + +LMGKNT ++ ++ + + L+PL++ N+G +F K DL + PAR+G++APIDV +PPG TG+DPS TSF + L I TKI + +++ HL +VT Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVT 169
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.039e-28 Identity = 68/166 (40.96%), Postives = 94/166 (56.63%), Query Frame = 2 Query: 200 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINRVLLKLS---HLWSLSGRV 688 A E K Y KL L E+Y + V DNV S Q+ +R+ LRG + ++MGKNTM++R +R L+P+++GNVG +FT DL APAR +AP+DV VP GNTG++P +TSFFQ L IPTKI R ++++ HL S +V Sbjct: 2 AISKESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDMPELE--RLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKV 165
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.008e-26 Identity = 61/145 (42.07%), Postives = 87/145 (60.00%), Query Frame = 2 Query: 209 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINR 643 +++K + K +L Y +++VA AD VGS+QLQ IR+ +RG VLMGK TM+++ IR A+ LN L+ N +IF K ++ GAPA+ G+ AP DV++P G TG++P+QTSF Q L I TKINR Sbjct: 6 SKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALNTY--LKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINR 148 HSP 2 Score: 31.9574 bits (71), Expect = 1.008e-26 Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 640 QGTVEIITPVELIRKGDKVGSSEAALL 720 +G ++I+ V +I+ G KVG+SEA LL Sbjct: 148 RGQIDIVNEVHIIKTGQKVGASEATLL 174
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.080e-25 Identity = 62/152 (40.79%), Postives = 85/152 (55.92%), Query Frame = 2 Query: 203 SKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLI-------PLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKI 637 S +E K Y+ + L +Y ++L DNV S Q+ ++RR LRG ++MGK T+ K+ + AE +A+ L+ LL GN LIFT ++ APARVG +AP DV+VP GNTG++P TSFFQ LNI TKI Sbjct: 3 SVSEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKI 154 HSP 2 Score: 27.7202 bits (60), Expect = 1.080e-25 Identity = 12/27 (44.44%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 640 QGTVEIITPVELIRKGDKVGSSEAALL 720 +GTVEI++ +++ GD+V +S A LL Sbjct: 156 KGTVEIVSDKKVLSVGDRVDNSTATLL 182
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 64/162 (39.51%), Postives = 90/162 (55.56%), Query Frame = 2 Query: 209 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINRVLLKLSHLWSLSGRVTR 694 A K+ Y +L QL+ E+ ++LV +AD+VGS QL IR LRG + VLMGKNT ++ +R ++ L+PL++ NVG IF + D APA+ G+ AP DV +P G TG+DP T FFQ L I TKI + +++ L R R Sbjct: 6 AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALRQQLQQ--QPQLQALLPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDVFIPAGPTGMDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGER 165
BLAST of FC931234 vs. ExPASy Swiss-Prot
Match: RLA0_LEICH (60S acidic ribosomal protein P0 OS=Leishmania chagasi GN=LCP0 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.623e-23 Identity = 58/154 (37.66%), Postives = 84/154 (54.55%), Query Frame = 2 Query: 218 KIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIP-------LLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINRVLLKL 658 K Y+ +L L +Y+ +L DNV S Q+ ++RRG RG + +MGK T+ + + A+ + LL GN GLIFT + APARVG + P DVVVP G+TG++P+QTSFFQ LNI TKI + ++++ Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRAQAKDASPEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGAI-PCDVVVPAGSTGMEPTQTSFFQALNIATKIAKGMVEI 160 HSP 2 Score: 28.1054 bits (61), Expect = 4.623e-23 Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 1 Query: 640 QGTVEIITPVELIRKGDKVGSSEAALL 720 +G VEI+T +++ GDKV +S A LL Sbjct: 155 KGMVEIVTEKKVLSVGDKVDNSTATLL 181 The following BLAST results are available for this feature:
BLAST of FC931234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931234 ID=FC931234; Name=FC931234; organism=Citrus clementina; type=EST; length=720bpback to top |