FC931239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_HUMAN (S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 73/213 (34.27%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSAS-AEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LEV F A+ G LR++ + + D +LK +C+I+S + ++YVLSESS+FV + I+KTCGTT LL ++ + ++S Y+R +F+ Q +PHR+F EE+ L+ F + A+ MG N+ W++Y+ E+ P TLE+ M+ LD FY + +A +T +SGIR ++P Sbjct: 7 FEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIF----PNGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIP 214
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM1_MOUSE (S-adenosylmethionine decarboxylase proenzyme 1 OS=Mus musculus GN=Amd1 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24 Identity = 73/213 (34.27%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSAS-AEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LEV F A G LR++ + + D +LK +C+I+S + ++YVLSESS+FV + I+KTCGTT LL ++ + ++S Y+R +F+ Q +PHR+F EE+ L+ F + A+ MG N+ W++Y+ E+ P TLE+ M+ LD FY + +A +T +SGIR ++P Sbjct: 7 FEGTEKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIF----PNGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIP 214
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM2_MUSSP (S-adenosylmethionine decarboxylase proenzyme 2 OS=Mus spretus GN=Amd2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 73/213 (34.27%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSAS-AEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LEV F A G LR++ + + D +LK +C+I+S + ++YVLSESS+FV + I+KTCGTT LL ++ + ++S Y+R +F+ Q +PHR+F EE+ L+ F + A+ MG N+ W++Y+ E+ P TLE+ M+ LD FY + +A +T +SGIR ++P Sbjct: 7 FEGTEKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNVIF----PNGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIP 214
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM2_MOUSE (S-adenosylmethionine decarboxylase proenzyme 2 OS=Mus musculus GN=Amd2 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23 Identity = 73/213 (34.27%), Postives = 114/213 (53.52%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSAS-AEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILP 669 FEG EK LEV F A G LR++ + + D +LK +C+I+S + ++YVLSESS+FV + I+KTCGTT LL ++ + ++S Y+R +F+ Q +PHR+F EE+ L+ F + A+ MG N+ W++Y+ E+ P TLE+ M+ LD FY + +A +T +SGIR ++P Sbjct: 7 FEGTEKLLEVWFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVLSESSIFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNVIF----PNGAAYCMGRM-NSDCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIP 214
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_SCHPO (S-adenosylmethionine decarboxylase proenzyme OS=Schizosaccharomyces pombe GN=spe2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.256e-22 Identity = 71/200 (35.50%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGR----GLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVR--YTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVY-----TLEMCMTGLDRKRASVFY 606 FEG EK LE+ F P G GL+++S++ D++L A+C ++S +++E +D+Y+LSESS+FV+ +K+I+KTCGTT LL S+P + R +R Y+R +F++ Q PH S+ EEV L F ++V+G P N WH++S A+ S + TLE+ MT + +R+ FY Sbjct: 20 FEGPEKLLELWFSAPIKTNLSAGEKANLGLKAVSRNDWDDMLAQAQCKVLSVVNSEEIDAYLLSESSMFVFAHKIILKTCGTTTLLASLPRLLEIASSVGFD-RPLRIFYSRKNFLYPERQLAPHTSWEEEVRYLQ----LFFPSGCSYVVG-PTNKNHWHLFSDLADDYSLLEDSLDPEDETLEVLMTDMSPERSLQFY 213
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22 Identity = 75/225 (33.33%), Postives = 113/225 (50.22%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSI-PAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYS------------ASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPNL 675 FEG EK LE+ F E + G LR++S+ + +L C I+S+ N+ +D++VLSESS+FV + I+KTCGTT L + + V + Y+R +F AQ PH+ F+EEV LD F + ++ +GS N + W++Y+ S E +P T+E+ M LD + S+FYK + A T SGI ILP + Sbjct: 9 FEGVEKLLEIWFEE----SSNGDDDLRNISRSDWENVLSNVNCQIISTSKNDIIDAFVLSESSMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNVVADLFYSRKNFTRPEAQITPHQGFTEEVTYLDSIF----PNGRSYCLGSM-NLECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQDLDPETMSIFYKNKFNDANGATVKSGIDTILPTM 224
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_XENLA (S-adenosylmethionine decarboxylase proenzyme OS=Xenopus laevis GN=amd1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20 Identity = 69/212 (32.55%), Postives = 111/212 (52.36%), Query Frame = 1 Query: 40 FEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAI--XXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVN-PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKIL 666 FEG EK LE+ F + A G LR + + + D++L+ C I+S + ++YVLSESS+FV + I+KTCGTT LL ++ + +++ Y+R +F+ Q +PHR+F EEV L+ F + A+ MG N+ W++Y+ ++ P TLE+ M+ LD + FY +A +T SGIR ++ Sbjct: 11 FEGTEKLLELWFSQQD--ASKGSGDLRDIPRFEWDKLLENVHCLIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGTTLLLQALVPLLELAREYCGFDGIQNFFYSRKNFMKPNHQEYPHRNFHEEVEFLNQIF----PNGAAYCMGR-INSDCWYLYTLDIPDEYVISQPDQTLEILMSELDPEVMDQFYMKEGVTANDVTRVSGIRDLI 215
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_YEAST (S-adenosylmethionine decarboxylase proenzyme OS=Saccharomyces cerevisiae GN=SPE2 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 66/222 (29.73%), Postives = 106/222 (47.75%), Query Frame = 1 Query: 28 SAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXV-----------RSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVY------TLEMCMTGLDRKRASVFYKTNESSAAMMTE 642 S FEG EK LE+ FF P + + LR++ + EILK +C ++S + LD+++LSESSLFV+ +K+ +KTCGTT L + + V Y+R F+F Q H+++++EV L+ KF + ++ +G D + W++Y + + Y T E+ MT LD + AS F E+S + E Sbjct: 24 STDAFEGPEKLLEIWFF-PHKKSITTEKTLRNIGMDRWIEILKLVKCEVLSMKKTKELDAFLLSESSLFVFDHKLTMKTCGTTTTLFCLEKLFQIVEQELSWAFRTTQGGKYKPFKVFYSRRCFLFPCKQAAIHQNWADEVDYLN----KFFDNGKSYSVGRNDKSNHWNLYVTETDRSTPKGKEYIEDDDETFEVLMTELDPECASKFVCGPEASTTALVE 240
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_LEIIN (S-adenosylmethionine decarboxylase proenzyme OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16 Identity = 75/215 (34.88%), Postives = 103/215 (47.91%), Query Frame = 1 Query: 22 PVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHF--GK---FG-MDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKR-----ASVFYKTNESSAAM 633 P FEG EKRLEV + GLRSL ++ IVS SNEY++SYVL+ESSLFV ++I+ TCGTT LL SIP I + V + ++ F Q PH S ++E A L HF GK FG +DS + + D+ R S+E + L M M GLD+++ + F T+ +AA+ Sbjct: 36 PEQGFSFEGPEKRLEVIL---RCTLETHVDGLRSLDDSVWSGVVGSLNAQIVSRESNEYINSYVLTESSLFVMKNRIILITCGTTTLLNSIPNILEAISAVRGELEWVSFMHKNYSFPWMQKGPHTSLADEFATLKQHFPTGKPYIFGPVDSDHYFLFCYDDIIR----PCSSEDDTQ------LSMTMYGLDKEQTKHWFSDRFISTSAETAAI 237
BLAST of FC931239 vs. ExPASy Swiss-Prot
Match: DCAM_LEIDO (S-adenosylmethionine decarboxylase proenzyme OS=Leishmania donovani PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16 Identity = 75/215 (34.88%), Postives = 103/215 (47.91%), Query Frame = 1 Query: 22 PVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHQLDEILKPAECTIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHF--GK---FG-MDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKR-----ASVFYKTNESSAAM 633 P FEG EKRLEV + GLRSL ++ IVS SNEY++SYVL+ESSLFV ++I+ TCGTT LL SIP I + V + ++ F Q PH S ++E A L HF GK FG +DS + + D+ R S+E + L M M GLD+++ + F T+ +AA+ Sbjct: 26 PEQGFSFEGPEKRLEVIL---RCTLETHVDGLRSLDDSVWSGVVGSLNAQIVSRESNEYINSYVLTESSLFVMKNRIILITCGTTTLLNSIPNILEAISAVRGELEWVSFMHKNYSFPWMQKGPHTSLADEFATLKQHFPTGKPYIFGPVDSDHYFLFCYDDIIR----PCSSEDDTQ------LSMTMYGLDKEQTKHWFSDRFISTSAETAAI 227 The following BLAST results are available for this feature:
BLAST of FC931239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931239 ID=FC931239; Name=FC931239; organism=Citrus clementina; type=EST; length=701bpback to top |