FC931243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: SF3_HELAN (Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.151e-74 Identity = 129/190 (67.89%), Postives = 152/190 (80.00%), Query Frame = 2 Query: 77 MASFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGTPKTVRVERSADQVTNS--RVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKGNFSQLDNHEQVEAVTENAT 640 M SF GTTQKC CEKTVYLVD+L A+ +VYHKACFRCHHC TLKLSN+ SF+GV+YC+ HFDQLFK TGSL+KSF+GTPK + ER+ Q T S R+SS F GT+DKC AC K VYPIE+V VDGT+YH+ACF+C HGGC ISPSNY+AHE RLYC+HHH QLF +KGN+SQL+ E V A E+ T Sbjct: 1 MKSFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHHFDQLFKRTGSLEKSFDGTPK-FKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEETVAAPAESET 189
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP3_MOUSE (Cysteine and glycine-rich protein 3 OS=Mus musculus GN=Csrp3 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.437e-18 Identity = 52/169 (30.77%), Postives = 79/169 (46.75%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTG----------------SLDKSFEGTPKTVRVERSADQVTNSRVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCR 550 G KC ACEKTVY +++ + + +HK CF C C+ L + + E +YCK + + + G L F+ +PK R +++ S+ S+ F G +KC C K+VY EKV G +HK CFRC G + +N + LYC+ Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPKPARAATTSNP---SKFSAKF-GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCK 169
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: XIRP2_MOUSE (Xin actin-binding repeat-containing protein 2 OS=Mus musculus GN=Xirp2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 71 RDMASFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSF 307 ++ ++F + C C+KTVY ++ L AD + +HK+CFRCHHC L L NY S G +YCKPHF QLFK G+ D+ F Sbjct: 3245 QEESAFLSDKEICIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSKGNYDEGF 3323 HSP 2 Score: 79.337 bits (194), Expect = 2.148e-14 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 2 Query: 374 SMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKGNFSQLDNHEQ 613 S F ++ C+ C+KTVYP+E + D ++HK+CFRC H +S NY + R+YC+ H QLF KGN+ + H+Q Sbjct: 3248 SAFLSDKEICIICQKTVYPMECLIADKQNFHKSCFRCHHCSSKLSLGNYASLHGRIYCKPHFKQLFKSKGNYDEGFGHKQ 3327
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP3_HUMAN (Cysteine and glycine-rich protein 3 OS=Homo sapiens GN=CSRP3 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18 Identity = 54/171 (31.58%), Postives = 76/171 (44.44%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTG----------------SLDKSFEGTPKTVRVERSADQVTNSRVSSMFA--GTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCR 550 G KC ACEKTVY +++ + + +HK CF C C+ L + + E +YCK + + + G L F+ +PK R VT S S A G +KC C K+VY EKV G +HK CFRC G + +N + LYC+ Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPKPAR------SVTTSNPSKFTAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCK 169
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP3_BOVIN (Cysteine and glycine-rich protein 3 OS=Bos taurus GN=CSRP3 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18 Identity = 54/171 (31.58%), Postives = 76/171 (44.44%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTG----------------SLDKSFEGTPKTVRVERSADQVTNSRVSSMFA--GTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCR 550 G KC ACEKTVY +++ + + +HK CF C C+ L + + E +YCK + + + G L F+ +PK R T S S FA G +KC C K+VY EKV G +HK CFRC G + +N + LYC+ Sbjct: 5 GGGAKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPKQAR------SATTSSNPSKFAKFGESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCK 169
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP3_RAT (Cysteine and glycine-rich protein 3 OS=Rattus norvegicus GN=Csrp3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17 Identity = 50/169 (29.59%), Postives = 78/169 (46.15%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTG----------------SLDKSFEGTPKTVRVERSADQVTNSRVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCR 550 G KC AC+KTVY +++ + + +HK CF C C+ L + + E +YCK + + + G L F+ +PK R +++ S+ S+ F G +KC C K+VY EKV G +HK CF C G + +N + LYC+ Sbjct: 5 GGGAKCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRKYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPKPARAATTSNP---SKFSAKF-GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFPCAICGKSLESTNVTDKDGELYCK 169
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CRIP2_BOVIN (Cysteine-rich protein 2 OS=Bos taurus GN=CRIP2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 56/184 (30.43%), Postives = 85/184 (46.20%), Query Frame = 2 Query: 104 KCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYC-KPHFDQLFKMTG--------------SLDKSFEGTPKTVRVERSADQVTN------SRVSSM--FAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYC-RHHHNQLFTQKG 583 KC C+KTVY +++++ K +H+ C RC HC TL + +G +C KP + LF G S +K P V V R+ ++ + S+ SS+ F G + C C K VY EKV G +H+ C RC G ++P + H+ + YC + + LF KG Sbjct: 4 KCPKCDKTVYFAEKVSSLGKDWHRFCLRCEHCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPSAEKPQVTGPIEVPVARTEERKASGPPKGPSKASSVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: LIMA1_HUMAN (LIM domain and actin-binding protein 1 OS=Homo sapiens GN=LIMA1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17 Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 68 PRDMASF-AGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGTP---------KTVRVERSADQVTNSRVSSMFAGTQDKCVA 409 P+ M F A + C C+KTVY +++L A+ +V+H +CFRC +C L L Y S G +YCKPHF+QLFK G+ D+ F P + + Q+ N+R + G +D +A Sbjct: 376 PKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIA 499 HSP 2 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 33/101 (32.67%), Postives = 55/101 (54.46%), Query Frame = 2 Query: 317 PKTVRVERSADQVTNSR----VSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKGNFSQLDNH 607 PK + + A ++ S + A ++ CV C+KTVYP+E++ + +H +CFRC++ +S Y + R+YC+ H NQLF KGN+ + H Sbjct: 358 PKPLSPDSRASSLSESSPPKAMKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGH 458
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP1_PONAB (Cysteine and glycine-rich protein 1 OS=Pongo abelii GN=CSRP1 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16 Identity = 51/175 (29.14%), Postives = 79/175 (45.14%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGTPKTVR--------VERSADQVTNSRVSSMFA---GTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 G +KC C+KTVY +++ + +HK+CF C CK L + +YCK + + + G GT T + E + T + +S FA G ++C C + VY EKV G S+HKACFRC G + + + +YC+ + + F KG Sbjct: 5 GGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEESPGHRPTTNPNASKFAQKIGGSERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKG 179
BLAST of FC931243 vs. ExPASy Swiss-Prot
Match: CSRP1_HUMAN (Cysteine and glycine-rich protein 1 OS=Homo sapiens GN=CSRP1 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16 Identity = 51/175 (29.14%), Postives = 79/175 (45.14%), Query Frame = 2 Query: 92 GTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYCSFEGVLYCKPHFDQLFKMTGSLDKSFEGTPKTVR--------VERSADQVTNSRVSSMFA---GTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHNQLFTQKG 583 G +KC C+KTVY +++ + +HK+CF C CK L + +YCK + + + G GT T + E + T + +S FA G ++C C + VY EKV G S+HKACFRC G + + + +YC+ + + F KG Sbjct: 5 GGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGHRPTTNPNASKFAQKIGGSERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKG 179 The following BLAST results are available for this feature:
BLAST of FC931243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931243 ID=FC931243; Name=FC931243; organism=Citrus clementina; type=EST; length=702bpback to top |