FC931251

Overview
NameFC931251
Unique NameFC931251
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length757
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: ANR44_CHICK (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = 3
Query:  201 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 662
            D++ R A    +H  A  G L     L+     +  +       TPLH +A   +  IVK LL    N  VE++  N+YG T LH+A  NG +     L+ +GA +    NNG TPLH +   +  +     ++ L+   AD + +  +GK+PL
Sbjct:  170 DKKDRRA----LHWAAYMGHLEVVALLINHGAEVTCKDKK--GYTPLHAAASNGQINIVKHLL----NLGVEIDEMNIYGNTALHIACYNGQDSVVNELIDYGANVNQPNNNGFTPLHFA---AASTHGALCLELLVNNGADVNIQSKDGKSPL 310          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: ANKR1_BOVIN (Ankyrin repeat domain-containing protein 1 OS=Bos taurus GN=ANKRD1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 46/156 (29.49%), Postives = 76/156 (48.72%), Query Frame = 3
Query:  222 KPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD---HLSNG 680
            K   +H     G L   ++L+     +  E   ++  T +H ++     +++K LL    N   ++ A++    TPLH+A + G  E A+ L+A  A + AK   G TPLH     ++R   Y  ++ L+ Y AD + K+  GKTP+D   H  NG
Sbjct:  153 KRTALHRACLEGHLAIVEKLIEAGAQI--EFRDMLESTAIHWASRGGSLDVLKLLL----NKGAKISARDKLLSTPLHVAVRTGHYECAEHLIACEADLNAKDREGDTPLH----DAVRLNRYKMIRLLITYGADLNVKNCAGKTPMDLVLHWQNG 298          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: TRPA1_MOUSE (Transient receptor potential cation channel subfamily A member 1 OS=Mus musculus GN=Trpa1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 58/197 (29.44%), Postives = 98/197 (49.75%), Query Frame = 3
Query:  153 GIRRQLPQLGQMQKNQ----DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK-DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 728
            G+R   P+  QMQ  +    D  +    P  +H   + G  ++   LL  N S+ ++      ++PLH +A Y +    + LL+   + ++ L   +++G TPLH+AAKNG ++  +LLL  GA      +NG T LH    ++       T+K +L+ N  C+ + D EG T L H +   G AK   +LL ++ +
Sbjct:  389 GLRNLRPEFMQMQHIKELVMDEDNDGCTP--LHYACRQGVPVSVNNLLGFNVSIHSKSKD--KKSPLHFAASYGRINTCQRLLQDISDTRL-LNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALF-LSDHNGWTALH----HASMGGYTQTMKVILDTNLKCTDRLDEEGNTAL-HFAAREGHAKAVAMLLSYNAD 574          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: ANKR1_CHICK (Ankyrin repeat domain-containing protein 1 OS=Gallus gallus GN=ANKRD1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.630e-11
Identity = 46/148 (31.08%), Postives = 73/148 (49.32%), Query Frame = 3
Query:  222 KPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 665
            K   +H     G L   ++L+     L  E   ++  T LH +      EIVK LL+      +   A++    TPLH+A + G ++ A+ L+A  A + AK   G TP+H     ++R   Y  V+ L+ Y AD + K+ +GKTP+D
Sbjct:  153 KRTALHRACSEGHLEVVKKLVEAGALL--ELKDMLESTALHWACRGGNLEIVKFLLD----KGINRNARDKLRSTPLHVAVRTGQHDCAEHLIACEADLNAKDREGDTPMH----DAVRLNRYKMVRLLILYGADLTIKNVDGKTPMD 290          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: V162_FOWPV (Putative ankyrin repeat protein FPV162 OS=Fowlpox virus GN=FPV162 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 47/138 (34.06%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  333 TPLHVSA-GYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKL--LLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLR---ELLLWHSEE 728
            TPLH +A  Y  +  ++ L+E+      E+ A N  G+TPLH AA++  N   KL  L+AHG+ + A     +TPLHL+ +    +E    +K L+E+ A+ ++ D  G+TP+ ++S    S  L+   ELL+ H  +
Sbjct:  230 TPLHDAATSYELSNTIEMLIEYGA----EVNAANSVGDTPLHCAARSR-NPVHKLKTLIAHGSNVNAVNGISVTPLHLATYSDNATE---ALKVLIEHGAEVNSVDIYGRTPMHYISRSYSSQSLKTAVELLVEHGAD 359          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: ANK1_MOUSE (Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 55/164 (33.54%), Postives = 79/164 (48.17%), Query Frame = 3
Query:  234 IHGCAQSGDLLAFQRLLRE--NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 719
            +H  +  G L   + LL+   +P++ N    V  +TPLH++A     E+ K LL+    +K +  A+    +TPLH AA+ G     KLLL +GA        G TPLH +     R     T   LLE  A  +    +G TPL H++   G  +L ELLL H
Sbjct:  404 LHVASFMGHLPIVKNLLQRGASPNVSN----VKVETPLHMAARAGHTEVAKYLLQ----NKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAA----REGHVDTALALLEKEASQACMTKKGFTPL-HVAAKYGKVRLAELLLEH 554          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 49/160 (30.63%), Postives = 83/160 (51.88%), Query Frame = 3
Query:  234 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 713
            +H  A   +L   Q LL    S+     P    TPLH+++      +V+ LL+       ++E +     TPLH AA+NG    +++LL HGA I+AK  NG++P+H++     + +    V+ LL+YNA+      +  TPL H++   G  ++ ++LL
Sbjct:  206 LHIAAHYENLNVAQLLLNRGASV--NFTPQNGITPLHIASRRGNVIMVRLLLD----RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAA----QGDHLDCVRLLLQYNAEIDDITLDHLTPL-HVAAHCGHHRVAKVLL 354          

HSP 3 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 3
Query:  333 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 713
            TPLHV+A Y K  + + LLE   +      A    G TPLH+A  +   +  KLLL  G    + A NG TPLH++     +       ++LL+Y    +A+  +G TPL HL+   G  ++  LLL
Sbjct:  534 TPLHVAAKYGKVRLAELLLEHDAHPN----AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAA----KQNQIEVARSLLQYGGSANAESVQGVTPL-HLAAQEGHTEMVALLL 651          
The following BLAST results are available for this feature:
BLAST of FC931251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ANR44_CHICK4.310e-1130.52Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANKR1_BOVIN4.310e-1129.49Ankyrin repeat domain-containing protein 1 OS=Bos ... [more]
TRPA1_MOUSE5.630e-1129.44Transient receptor potential cation channel subfam... [more]
ANKR1_CHICK5.630e-1131.08Ankyrin repeat domain-containing protein 1 OS=Gall... [more]
V162_FOWPV7.352e-1134.06Putative ankyrin repeat protein FPV162 OS=Fowlpox ... [more]
ANK1_MOUSE7.352e-1133.54Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34103B06EF PostHarvP1 Citrus clementina cDNA clone C34103B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931251 ID=FC931251; Name=FC931251; organism=Citrus clementina; type=EST; length=757bp
GAGGGGACAGTGAAGCAGCAGCAGTGTTAGAAGAATCGGGCGCAAGAGTC
GGAGGGTGGGGAATTAATTTCCTTAAGTGACCGCCAAAGACTCAACAAGA
AACAAAAAATTCTATCTTTATCTGAATCTCCATTTGGCTTTTAGATTAAG
GGGGGATTAGGCGCCAATTACCTCAGCTGGGGCAGATGCAGAAGAATCAA
GATCGACGGTCAAGATCTGCCAAGCCCGCCACCATTCATGGCTGCGCCCA
GTCTGGGGATCTTCTCGCCTTCCAGAGGCTACTTCGAGAGAACCCATCTC
TTCTCAATGAAAGAAATCCCGTTATGGCACAAACACCCCTTCATGTTTCC
GCTGGTTATAACAAGGCTGAAATAGTTAAATCTCTGCTTGAATGGCCAGG
AAACGATAAGGTTGAGTTGGAGGCCCAAAACATGTATGGAGAAACTCCAT
TGCACATGGCAGCGAAGAATGGATGTAATGAAGCTGCAAAGTTACTTCTT
GCTCATGGTGCTTTTATTGAAGCCAAAGCTAATAATGGGATGACACCATT
ACACCTTTCCGTCTGGTACTCTATTCGGTCTGAAGACTACGCAACTGTTA
AGACATTGCTTGAGTATAATGCTGACTGCAGTGCTAAGGACAATGAGGGC
AAGACTCCTCTAGATCATCTCTCAAATGGCCCAGGCAGTGCGAAGTTGCG
TGAACTATTACTCTGGCACAGTGAAGAGCAGCGGAAGAGAAGAGCACTTG
AAGCGTG
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