FC931252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.108e-45 Identity = 93/209 (44.50%), Postives = 138/209 (66.03%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 +G++++++ N +V+ V PS VAL+ S L LP + D ++L+ ++ P +Y IGG D Q +E++E +ELP+ H L++ +GI P+GVLLYGPPGTGKT+LA+AVAHHT FIRV GSE VQKY+GEG R+VR++F +ARE++P+IIF+DEID+I + R ++ +G D EVQR ++ELL + Sbjct: 74 IGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILMELLNQM 281
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.696e-45 Identity = 95/194 (48.97%), Postives = 132/194 (68.04%), Query Frame = 1 Query: 112 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLG-SHGDNXIDILD 690 P V + DSY++ LPS+ D V M+V++ P Y IGGL++QI+E+ E I LP+ H E F+ LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELL L ++ N DILD Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILD 323
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 4.696e-45 Identity = 95/194 (48.97%), Postives = 133/194 (68.56%), Query Frame = 1 Query: 112 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLG-SHGDNXIDILD 690 P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+ H + F+ LGI PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELL L ++ N DILD Sbjct: 137 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILD 329
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.133e-45 Identity = 89/196 (45.41%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 40 LVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 ++K H + V+ RVA+ NDS+ + +L + D M+V++ P TY IGGLD Q++E++E +E P+ +PE F+++G+ P GVLL+GPPGTGKT+LA+AVA+ TD +FI+++GSELV+K+IGEGSR+VR+LF +A + P+IIF+DEID++ + R +S + +GD+EVQRTM++LL+ + Sbjct: 90 VIKQHGNNQEVLTELSPRLADTLEVGDRVAI-NDSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKT-SGDAEVQRTMMQLLSEM 283
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.373e-41 Identity = 86/194 (44.33%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 112 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLG-SHGDNXIDILD 690 P + + DSY++ LPS+ D V M+V++ P Y IGGL +QI+E+ E I LP++ + F LG+ PKG L++GPPGTGKTLLARA A ++ TF++++ +LVQ +IG+G+++VR+ F +A+E +P+IIF+DE+D+IG+ R +S GD EVQRTMLELL L ++ N +D LD Sbjct: 146 PGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLD 338
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.257e-38 Identity = 79/141 (56.03%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 211 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 VPD TY+ IGGL ++++ ++E+IELP+KHPELF+ LGI PKGVLLYGPPGTGKTL+A+AVA+ D FI +SG E++ KY GE + +RE+F A+E+APSIIF+DEIDSI R E EV+R ++ L +LMD Sbjct: 176 VPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEV-----TGEVERRVVAQLLALMD 311 HSP 2 Score: 135.576 bits (340), Expect = 2.955e-31 Identity = 70/156 (44.87%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 175 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV-QRTMLELLTSLMDLK 639 ++P + +VP+ ++ IGGL+ +E+ E +E P+K+PE+F + I P+G+LL+GPPGTGKTLLA+AVA+ ++ FI V G EL+ K++GE + VRE+F AR+ AP +IF DEIDS+ R G GDS V +R + +LLT L L+ Sbjct: 437 IEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR----GGIGDSHVTERVVSQLLTELDGLE 588
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.759e-37 Identity = 78/149 (52.35%), Postives = 108/149 (72.48%), Query Frame = 1 Query: 187 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 V+ +K KVPD TY+ IGGL +++K+++E+IELP++HPELFE LGI PKGVLL GPPGTGKTLLA+AVA+ F ++G E++ KY+GE +R++F A E+APSIIF+DEID+I R E+ EV+R ++ L +LMD Sbjct: 165 VSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEA-----TGEVERRLVAQLLTLMD 308 HSP 2 Score: 131.339 bits (329), Expect = 5.573e-30 Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 175 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGSHGDNXIDILD 690 V+P + +VP+ ++ IGGL++ +E++E +E P+K E+FE +G+ PKGVLL+GPPGTGKTLLA+AVA+ + FI V G E+ K++GE + +RE+F AR+ AP IIF DEID+I R S +V +L L + + K + + N DI+D Sbjct: 434 VEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAA--TNRPDIID 603
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.029e-37 Identity = 79/163 (48.47%), Postives = 111/163 (68.10%), Query Frame = 1 Query: 202 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGSHGDNXIDILD 690 +E+V +Y+ IGGL +Q+ +I+E+IELP+KHPELFE LGI PKGV+LYGPPGTGKTL+ARAVA+ + F+ ++G E++ KY G+ + +RE+F A E APSIIF+DEIDSI R E G + V +L L+ + + H +G+ N ID +D Sbjct: 181 LEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKR-EEVQGEVERRVVAQLLTLMDGMKERGHVIVIGA--TNRIDAID 340 HSP 2 Score: 133.265 bits (334), Expect = 1.467e-30 Identity = 66/140 (47.14%), Postives = 97/140 (69.29%), Query Frame = 1 Query: 208 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 +VP+ +D IGGL+ +EIKE +ELP+ P++F+ LGI KG LLYGPPG GKTLLA+AVA ++ FI + G E++ K++GE + +RE+F A++ AP+I+F+DEIDSI R G+ + +R + +LLTSL Sbjct: 460 EVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRR---GTTSDSGVTERIVNQLLTSL 596
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.085e-33 Identity = 68/137 (49.64%), Postives = 103/137 (75.18%), Query Frame = 1 Query: 223 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 TY+ IGGL+ +I+ ++E++ELP+KHP++F+ LGI P+GVLL+GPPGTGKTLLA+AVA+ T +F ++G E++ KY GE + +RE+F A++ +PSIIF+DE+DSI R E +G EV+R ++ L ++MD Sbjct: 187 TYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR-EDVTG----EVERRVVAQLLTMMD 318 HSP 2 Score: 136.346 bits (342), Expect = 1.732e-31 Identity = 68/174 (39.08%), Postives = 106/174 (60.92%), Query Frame = 1 Query: 169 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGSHGDNXIDILD 690 S+V+P + ++P T+D +GGL + +KE +E P+ PE F +G+ P GVLLYGPPGTGKTL+A+AVA+ T+ FI V G +L+ K++GE + +R+ F AR+ AP++IF DE+DS+ R ++G N V +L L L +++ + + N DI+D Sbjct: 442 SEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAA--TNRPDIID 613
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.200e-32 Identity = 67/143 (46.85%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 205 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 E++ D YD +GG+ +Q+ +I+E++ELP++HP+LF+S+G+ PKG+LLYGPPG+GKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R ++ + EV+R ++ L +LMD Sbjct: 199 ERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-----NGEVERRIVSQLLTLMD 336 HSP 2 Score: 132.88 bits (333), Expect = 1.915e-30 Identity = 67/164 (40.85%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 202 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGSHG-DNXIDILD 690 V +VP+ +++ IGGL+ +E++E ++ P++HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI + R G+G R + +LLT + + + + G N DI+D Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIID 634 The following BLAST results are available for this feature:
BLAST of FC931252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931252 ID=FC931252; Name=FC931252; organism=Citrus clementina; type=EST; length=767bpback to top |