FC931252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.484e-54 Identity = 111/209 (53.11%), Postives = 146/209 (69.86%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 VG ++ VM K+++K K+VV P +VAL S + +LP+ DP V M+V P+ Y IGGL+ QI E+KE +ELP+ PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIR+ GSELVQKYIGEG+RMVRELF +A+E +PSIIF+DEIDSIG+ R++S + +GD EVQRT+++LL + Sbjct: 83 VGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSIT-SGDREVQRTLVQLLAEM 290
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 4.238e-54 Identity = 118/232 (50.86%), Postives = 155/232 (66.81%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKLGSHGDNXIDILD 690 VG V ++ +V+VK K+VV P RVAL + + +LP+ DP+V +VE+ P+ +Y+ IGGLD QI+EI+E +ELP+ PELF +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIRV GSE VQKYIGEG+R+VRE+F +A+E APSIIF+DE+D+I + R S + +GD EVQRTM++LL L D + K+ N IDILD Sbjct: 65 VGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDT-SGDREVQRTMMQLLAELDGFDPRGDVKV-IGATNRIDILD 294
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 210.69 bits (535), Expect = 7.228e-54 Identity = 107/198 (54.04%), Postives = 137/198 (69.19%), Query Frame = 1 Query: 34 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 K ++ V K+VV RV + + Y +H+ LP K+DP V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+ L Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQL 306
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.440e-54 Identity = 112/233 (48.07%), Postives = 159/233 (68.24%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKLGSHGDNXIDILDQ 693 +G V V+ ++V+V+ +++V P R L S + +LP+ D + M++ + P+ TY+ IGGL+ QI+EI+E +ELP+ P+LFE +GI+ PKGVLLYGPPGTGKTLLARAVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ APSIIF+DEID+IG+ R +S + +GD EVQRT+++LL + D + K+ + N IDILD+ Sbjct: 77 IGTVTDVIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDS-TTSGDREVQRTLMQLLAEMDGFDNRGDVKIVA-ATNRIDILDR 307
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.440e-54 Identity = 103/209 (49.28%), Postives = 145/209 (69.38%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 VG + +++ +V + ++ V P V L + ++ + +L DP+V++MK+EK P TY +GGLDQQI+EIKE +ELP+ HPE +E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G +MVRELF +A E+APSI+F+DEID++G+ R +S SG G+ E+QRTMLELL L Sbjct: 112 VGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQL 319
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.233e-53 Identity = 108/198 (54.55%), Postives = 136/198 (68.69%), Query Frame = 1 Query: 34 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 K ++ + K+VV RV + Y + L LP ++DP V +M VE+ PD TY +GG QI++++EV+ELP+ PE F +LGI PKG+LLYGPPGTGKTL ARAVA+ TD TFIRV GSELVQKY+GEG+RMVRELF MAR IIF DEID++G AR + G+G GD+EVQRTMLEL+T L Sbjct: 144 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAG-GDNEVQRTMLELITQL 340
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.233e-53 Identity = 110/213 (51.64%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 VGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 V K++ N K ++ V K+VV RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++ L Sbjct: 88 VARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQL 299
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.233e-53 Identity = 110/213 (51.64%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 VGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 V K++ N K ++ V K+VV RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++ L Sbjct: 87 VARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQL 298
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.233e-53 Identity = 110/213 (51.64%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 VGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 V K++ N K ++ V K+VV RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++ L Sbjct: 88 VARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQL 299
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.233e-53 Identity = 110/213 (51.64%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 VGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 V K++ N K ++ V K+VV RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++ L Sbjct: 88 VARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQL 299 The following BLAST results are available for this feature:
BLAST of FC931252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931252 ID=FC931252; Name=FC931252; organism=Citrus clementina; type=EST; length=767bpback to top |