FC931252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS2_METTM (Putative 26S protease regulatory subunit homolog MTH1011 OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15 Identity = 52/168 (30.95%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 229 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGSHGDNXIDILDQLFSARRMTEDEFQ 732 D+IG D +IK +I ++ P+ F P+ VL +G PGTGKT+LA+++A+ + + L+ +++G+G+R + EL+ +A + APS+IF+DE+D+IG R SEV +L + + +G+ N ++LD +R E EF+ Sbjct: 128 DVIGQEDAKIK--CRIIMRYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAKSLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSLRGDVSEVVNALLTEMDGINQNWGVVTIGA--TNNPELLDNAIRSRFEEEIEFK 288
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: NSF_RAT (Vesicle-fusing ATPase OS=Rattus norvegicus GN=Nsf PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 214 PDSTYDM--IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMAREH--------APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 PD ++ IGGLD++ +I + + PE+ E +G KG+LLYGPPG GKTLLAR + + + V+G E++ KY+GE +R+LF A E II DEID+I R GS G + V T++ L S +D Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR---GSMAGSTGVHDTVVNQLLSKID 359
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 214 PDSTYDM--IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMAREH--------APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 PD ++ IGGLD++ +I + + PE+ E +G KG+LLYGPPG GKTLLAR + + + V+G E++ KY+GE +R+LF A E II DEID+I R GS G + V T++ L S +D Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR---GSMAGSTGVHDTVVNQLLSKID 359
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: NSF_MOUSE (Vesicle-fusing ATPase OS=Mus musculus GN=Nsf PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 214 PDSTYDM--IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMAREH--------APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 PD ++ IGGLD++ +I + + PE+ E +G KG+LLYGPPG GKTLLAR + + + V+G E++ KY+GE +R+LF A E II DEID+I R GS G + V T++ L S +D Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR---GSMAGSTGVHDTVVNQLLSKID 359
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: NSF_HUMAN (Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 214 PDSTYDM--IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMAREH--------APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 PD ++ IGGLD++ +I + + PE+ E +G KG+LLYGPPG GKTLLAR + + + V+G E++ KY+GE +R+LF A E II DEID+I R GS G + V T++ L S +D Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR---GSMAGSTGVHDTVVNQLLSKID 359
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: NSF_CRIGR (Vesicle-fusing ATPase OS=Cricetulus griseus GN=NSF PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 56/152 (36.84%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 214 PDSTYDM--IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMAREH--------APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 PD ++ IGGLD++ +I + + PE+ E +G KG+LLYGPPG GKTLLAR + + + V+G E++ KY+GE +R+LF A E II DEID+I R GS G + V T++ L S +D Sbjct: 211 PDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR---GSMAGSTGVHDTVVNQLLSKID 359
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.064e-15 Identity = 54/143 (37.76%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 235 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMA--------REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 IGGLD + I + + P + E LGI KG+LLYGPPGTGKTL+AR + + + V+G E++ KY+G+ VR+LF A E II DE+D+I R GS GD+ V ++ L + MD Sbjct: 271 IGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR---GSSGGDTGVGDQVVNQLLAKMD 410
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.128e-14 Identity = 47/126 (37.30%), Postives = 67/126 (53.17%), Query Frame = 1 Query: 235 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELF--------VMAREHAPSIIFMDEIDSIGSARMESGSGNG 582 +GGLD++ +I + I P + E LGI+ KG+LLYGPPGTGKTL+AR + + + V+G E++ KY+G +R LF E + II DE+DS+ R G G G Sbjct: 241 VGGLDKEFTKIFRRAFASRIFPPSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKIVNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTG 366
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: NSF_DICDI (Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.599e-14 Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = 1 Query: 235 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELFVMAR--------EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMD 633 IGGLD + ++I + I P + + LG+ KG+LLYGPPGTGKTL+AR + + + VSG ++ KY+G+ +R LF A + II DE+D+I +R GS GDS V +++ L +++D Sbjct: 224 IGGLDAEFRDIFRRAFSSRIFPPAIVKKLGVNHVKGMLLYGPPGTGKTLIARQIGKMLNGREPKVVSGPSILNKYVGQSEENIRMLFRDAEIEQKAKGDDSGLHIIIFDELDAICKSR---GSRQGDSGVGDSVVNQLLAMID 363
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: SEC18_CANAL (Vesicular-fusion protein SEC18 OS=Candida albicans GN=SEC18 PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.779e-13 Identity = 54/165 (32.73%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 235 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR-VSGSELVQKYIGEGSRMVRELF--------VMAREHAPSIIFMDEIDSIGSAR---MESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGSHGDNXIDILD 690 IGGLD + ++I + I PEL E L KG+LLYGPPGTGKTL+AR ++ + + V+G E++ KY+G +R LF + + +I DE+DS+ R G+G GD+ V + +L + + L + +G N +D++D Sbjct: 277 IGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPPGTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQ-LLSKMDGVDQLNNILVIGM--TNRLDLID 438 The following BLAST results are available for this feature:
BLAST of FC931252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931252 ID=FC931252; Name=FC931252; organism=Citrus clementina; type=EST; length=767bpback to top |