FC931252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.104e-49 Identity = 98/209 (46.89%), Postives = 140/209 (66.99%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 +G+ ++++ +N +V Y V PS V L S L +LP + D ++L+ + PD TY+ IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G D EVQR ++ELL + Sbjct: 84 IGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQM 291
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 192.2 bits (487), Expect = 2.660e-48 Identity = 103/220 (46.82%), Postives = 141/220 (64.09%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL--MDLKHQTKL 654 +GEV+K + + K +VK +Y+V RV L + + ILP + DPLV M + + T+D IGGL +QI+E++EVIELP+K+PE+F+ +GI PKGVLLYGPPGTGKTLLA+AVA FI S +V KYIGE +R++RE+F A+EH P IIFMDE+D+IG R G+ + D E+QRT++ELLT + D QTK+ Sbjct: 105 IGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGT-SADREIQRTLMELLTQMDGFDNLGQTKI 323
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.475e-48 Identity = 97/209 (46.41%), Postives = 141/209 (67.46%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 +G+ ++++ +N +V Y V PS VAL S L +LP + D ++L+ + PD +Y+ IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVA+HT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G D EVQR ++ELL + Sbjct: 79 IGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQM 286
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 7.740e-48 Identity = 103/231 (44.59%), Postives = 143/231 (61.90%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLGS-HGDNXIDILD 690 +GEV++ + +++VK +YVV TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID+IG R G+ + D E+QRT++ELL L + K+ N D+LD Sbjct: 63 IGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLD 292
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.011e-47 Identity = 98/209 (46.89%), Postives = 135/209 (64.59%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 +GEV++ + +++VK +YVV TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID+IG R G+ + D E+QRT++ELL L Sbjct: 63 IGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQL 270
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.320e-47 Identity = 95/209 (45.45%), Postives = 137/209 (65.55%), Query Frame = 1 Query: 1 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSL 627 +G+ ++ + +N +V Y V PS VAL S L +LP + D +++++ ++ PD Y IGG+D Q +EI+E +ELP+ H EL+ +GI P+GVL+YGPPG GKT+LA AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E++P+IIF+DEID+I + R ++ +G D EVQR +LELL + Sbjct: 86 IGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQM 293
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6A_RAT (26S protease regulatory subunit 6A OS=Rattus norvegicus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.320e-47 Identity = 99/194 (51.03%), Postives = 135/194 (69.59%), Query Frame = 1 Query: 112 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLG-SHGDNXIDILD 690 P V + DSY++ LP++ D V M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELL L + T++ N +DILD Sbjct: 147 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 339
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6A_HUMAN (26S protease regulatory subunit 6A OS=Homo sapiens GN=PSMC3 PE=1 SV=3) HSP 1 Score: 189.889 bits (481), Expect = 1.320e-47 Identity = 99/194 (51.03%), Postives = 135/194 (69.59%), Query Frame = 1 Query: 112 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLG-SHGDNXIDILD 690 P V + DSY++ LP++ D V M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELL L + T++ N +DILD Sbjct: 147 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 339
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.724e-47 Identity = 102/228 (44.74%), Postives = 148/228 (64.91%), Query Frame = 1 Query: 10 VVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLG-SHGDNXIDILD 690 V+ ++ KV+V+ +V P + VAL + +LP + D V +V + P+ Y IGGL++QI EI+EVIELP+K+PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA ++ TFI+V SE QK++GEG+R+VRE+F +AR APSI+F+DEID+IG+ R++ G+ +G+ E+QRT+++LL + K + N +DILD Sbjct: 61 VLDILPDGKVIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT-SGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILD 287
BLAST of FC931252 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.252e-47 Identity = 99/194 (51.03%), Postives = 134/194 (69.07%), Query Frame = 1 Query: 112 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLTSLMDLKHQTKLG-SHGDNXIDILD 690 P V + DSY++ LP+ D V M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELL L + T++ N +DILD Sbjct: 150 PGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILD 342 The following BLAST results are available for this feature:
BLAST of FC931252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 374
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931252 ID=FC931252; Name=FC931252; organism=Citrus clementina; type=EST; length=767bpback to top |