FC931253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: Y1879_STAES (Putative 2-hydroxyacid dehydrogenase SE_1879 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1879 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 60/212 (28.30%), Postives = 94/212 (44.34%), Query Frame = 1 Query: 82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPL---GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699 +I+ AG +++D++ R++ I VTN +A + A R + G PL G + GK +GI+GLG IG VAKR F + YT +K Y ++ L ++D + + A HHMI+ + + +IN GRG +++E+ LV L + GA LDV+E EP L + N Sbjct: 68 KIIANYGAGFNNIDVEYARQQNIDVTNTPHASTNATADLTIGLILSVARRIVEGDHLSRTTGFD--GWAPLFFRGREVSGKTIGIIGLGEIGGAVAKRARAFDMDVLYTGPHRKEEKERDIGAKYVDLDTLLKNADFITINAAYNPSLHHMIDTEQFNKMKSTAYLINAGRGPIVNEQSLVEALDNKVIEGAALDVYEFEPEITDALKSFKN 277
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: SERA_PIG (D-3-phosphoglycerate dehydrogenase OS=Sus scrofa GN=PHGDH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 68/208 (32.69%), Postives = 96/208 (46.15%), Query Frame = 1 Query: 82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYANVSGLAADS-----DVLIVCCALTEETHHMINKDVMTALGKEGV-IINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELL 687 ++V + G+D+VDL+ R+GILV N N S A ++G W +G+ L GK +GI+GLG IG EVA R+ FG P VS F V L + D + V L T ++N D AL K+GV ++N RG ++DE L+ L G+ GA LDVF +EP + L+ Sbjct: 71 QVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMILCLARQIPQATASMKDGKWERKKF--MGTELNGKVLGILGLGRIGREVATRMQSFGMKTIGYDPIIAPEVSASF--GVQQLPLEEIWPLCDFITVHTPLLPSTTGLLN-DSTFALCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALV 273
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GHRB_SHISS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella sonnei (strain Ss046) GN=ghrB PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GHRB_SHIB3 (Glyoxylate/hydroxypyruvate reductase B OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GHRB_ECOUT (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain UTI89 / UPEC) GN=ghrB PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSM (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAQFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GHRB_ECOSE (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain SE11) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLI (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain K12) GN=ghrB PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLC (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ghrB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GHRB_ECOK1 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O1:K1 / APEC GN=ghrB PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 57/194 (29.38%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDH-GAYPLGSTLGGKRVGIVGLGSIGSEVAKRL-VPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP 666 + G D+ D+ R IL+ + +E A + G W G G+ + K +GIVG+G IG +A+R F I Y +R+ F Y ++ L +SD + + LT+ETHH+ + + + IN GRG ++DE L+ L +GE+ AGLDVFE EP Sbjct: 74 SVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEP 267 The following BLAST results are available for this feature:
BLAST of FC931253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 151
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931253 ID=FC931253; Name=FC931253; organism=Citrus clementina; type=EST; length=700bpback to top |