FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP9_HUMAN (Multidrug resistance-associated protein 9 OS=Homo sapiens GN=ABCC12 PE=1 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 2.035e-57 Identity = 105/223 (47.09%), Postives = 152/223 (68.16%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 WPS G+I RD Q+RY + P VL ++ + GIVGRTGSGKS+L LFR+VEPA+ RT+L++IPQDPV+F GTVR N+DP E +TDE +W+ L++ + D + K KL ++VTENGEN+S+G+RQL+C+ R LL+ KI++LDEATAS+D+ TD L+Q +++ F CTV+TIAHR+ +V++ D VL++ +G + E+D Sbjct: 1114 WPSRGEITFRDYQMRYRDNTPLVLDSLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICILSLEDLRTKLTVIPQDPVLFVGTVRYNLDPFESHTDEMLWQVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCVARALLRNSKIILLDEATASMDSKTDTLVQNTIKDAFKGCTVLTIAHRLNTVLNCDHVLVMENGKVIEFD 1336
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 4.533e-57 Identity = 109/230 (47.39%), Postives = 150/230 (65.22%), Query Frame = 1 Query: 7 SRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 +RP WPS G I D+ +RY P +P VL G+S +K G+VGRTG+GKS+++ L+RIVE R LSIIPQ PV+F GTVR N+DP E+ D +WEAL++ + D + + LD++V+E GEN+S+GQRQL+ L R LL+R KIL LDEATASVD TD+LIQ+++R+ F CT++ IAHR+ ++ID D +L+LS G + EYDS Sbjct: 1223 NRPVSGWPSRGSIQFEDVHLRYRPGLPPVLHGLSFFVYPSEKVGVVGRTGAGKSSMLNALYRIVELEKGRILIDDYDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILFLDEATASVDVRTDSLIQRTIREEFKSCTMLIIAHRLNTIIDCDKILVLSSGQVLEYDS 1452
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCCC_DICDI (ABC transporter C family member 12 OS=Dictyostelium discoideum GN=abcC12 PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.010e-56 Identity = 107/228 (46.93%), Postives = 152/228 (66.67%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 RP+ WP +G I +L +RY + VL+GI+C ++K GIVGRTG+GKS+++ LFR++E + R L+IIPQDPV+F GT+R N+DP E D ++W LD QL + E L+SKVTENGEN+S+GQRQL+ L R LL++ KIL+LDEATASVD +D+LIQ ++R FS+CT++TIAHR+ +++DSD +++L G I E+D Sbjct: 1036 RPSPDWPINGSIKFDNLVMRYREGLDPVLKGITCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGSISIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENLDPFNECPDHELWSILDDIQLSKVFKSTEEGLNSKVTENGENFSVGQRQLIVLARALLRKPKILVLDEATASVDGQSDSLIQATIRNKFSNCTILTIAHRLNTIMDSDKIMVLDAGKISEFD 1263
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCCA_DICDI (ABC transporter C family member 10 OS=Dictyostelium discoideum GN=abcC10 PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.010e-56 Identity = 106/228 (46.49%), Postives = 155/228 (67.98%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 RP+ WP +G I +L +RY + VL+GI+C ++K GIVGRTG+GKS+++ LFR++E + R L+IIPQDPV+F GT+R N+DP E ++E ++ ++ Q+ V+ EG LDSKVTENGEN+S+GQRQL+ L R LL++ KIL+LDEATASVD +D+LIQ ++R FS+CT++TIAHR+ +++DSD +++L G I E+D Sbjct: 1042 RPSPDWPINGSIKFDNLVMRYREGLDPVLKGITCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGSISIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENLDPFNERSEEDLFSTIEDIQMSAVVKSLEGGLDSKVTENGENFSVGQRQLIVLARALLRKPKILVLDEATASVDGQSDSLIQATIRNKFSNCTILTIAHRLNTIMDSDRIMVLDAGKISEFD 1269
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP2_RABIT (Canalicular multispecific organic anion transporter 1 OS=Oryctolagus cuniculus GN=ABCC2 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.722e-56 Identity = 110/229 (48.03%), Postives = 150/229 (65.50%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 RP WP G+I + QVRY P + VL+GI+C +K G+VGRTG+GKS+L LFRI+E A R +L+IIPQDPV+F G++R N+DP Y+DE+IW AL+ L V + L +V+E +N S+GQRQL+CLGR LL++ KIL+LDEATA+VD TD+LIQ ++R FS CTVITIAHR+ +++DSD +++L +G I EY S Sbjct: 1287 RPPAGWPHKGEIQFSNYQVRYRPELDLVLKGINCDIKSMEKIGVVGRTGAGKSSLTNCLFRILEAAGGHITIDGIDIASIGLHDLRGKLTIIPQDPVLFSGSLRMNLDPFNNYSDEEIWRALELAHLKSFVAGLQHGLSREVSEAEDNLSIGQRQLLCLGRALLRKSKILVLDEATAAVDLETDHLIQTTIRNEFSHCTVITIAHRLHTIMDSDKIMVLDNGNIVEYGS 1515
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP4_HUMAN (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3) HSP 1 Score: 218.779 bits (556), Expect = 2.249e-56 Identity = 103/230 (44.78%), Postives = 155/230 (67.39%), Query Frame = 1 Query: 4 KSRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 + RP +WP G I ++ Y+P P VL+ ++ ++K GIVGRTG+GKS+LI LFR+ EP R ++SIIPQ+PV+F GT+R N+DP E+TDE++W AL + QL + + GK+D+++ E+G N+S+GQRQLVCL R +L++ +IL++DEATA+VD TD LIQ+ +R+ F+ CTV+TIAHR+ ++IDSD +++L G ++EYD Sbjct: 1028 QKRPPPAWPHEGVIIFDNVNFMYSPGGPLVLKHLTALIKSQEKVGIVGRTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDL-RKKMSIIPQEPVLFTGTMRKNLDPFNEHTDEELWNALQEVQLKETIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILRKNQILIIDEATANVDPRTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYD 1256
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.249e-56 Identity = 109/230 (47.39%), Postives = 149/230 (64.78%), Query Frame = 1 Query: 7 SRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 +RP WPS G I D+ +RY P +P VL G++ +K G+VGRTG+GKS+++ LFRIVE R LSIIPQ PV+F GTVR N+DP E+ D +WEAL + + D + + LD++V E GEN+S+GQRQL+ L R LL+R KIL+LDEATASVD TD+LIQ+++R+ F CT++ IAHR+ ++ID D +L+LS G + EYDS Sbjct: 1223 NRPVCGWPSGGSIKFEDVHLRYRPGLPPVLHGLTFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEVEKGRIMIDDCDVAKFGLTDVRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDAGLWEALHRAHIKDVISRNPFGLDAEVCEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDS 1452
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCCB_HUMAN (ATP-binding cassette transporter sub-family C member 11 OS=Homo sapiens GN=ABCC11 PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.837e-56 Identity = 102/223 (45.74%), Postives = 151/223 (67.71%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 WP HG+I +D ++Y + P VL GI+ T G + GIVGRTGSGKS+L LFR+VEP A R++LS+IPQDPV+ GT+R N+DP + +TD+QIW+AL++ L + K KL + V ENG N+S+G+RQL+C+ R +L+ KI+++DEATAS+D TD LIQ+++R+ F CTV+ IAHR+T+V++ D +L++ +G + E+D Sbjct: 1135 WPQHGEIIFQDYHMKYRDNTPTVLHGINLTIRGHEVVGIVGRTGSGKSSLGMALFRLVEPMAGRILIDGVDICSIGLEDLRSKLSVIPQDPVLLSGTIRFNLDPFDRHTDQQIWDALERTFLTKAISKFPKKLHTDVVENGGNFSVGERQLLCIARAVLRNSKIILIDEATASIDMETDTLIQRTIREAFQGCTVLVIAHRVTTVLNCDHILVMGNGKVVEFD 1357
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.011e-56 Identity = 110/230 (47.83%), Postives = 148/230 (64.35%), Query Frame = 1 Query: 7 SRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 +RP WPS G I D+ +RY P +P VL G+S K GIVGRTG+GKS+L+ LFRIVE R L IIPQ PV+F GTVR N+DP E+ D +WE+L++ L D +R+ LD++VTE GEN+S+GQRQL+ L R LL+R KIL+LDEATA+VD TD LIQ+++R+ F CT++ IAHR+ ++ID D VL+L G ++E+ S Sbjct: 1225 NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGVSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEVTEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSCTMLIIAHRLNTIIDCDKVLVLDSGKVQEFSS 1454
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABC2_SCHPO (ATP-binding cassette transporter abc2 OS=Schizosaccharomyces pombe GN=abc2 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.548e-56 Identity = 108/229 (47.16%), Postives = 148/229 (64.63%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 RP WPSHG I VRY ++P VL IS ++K GIVGRTG+GKSTL LFR++EP + R+RL+IIPQ+ FEGT+R N+DP TDE+IW AL+ L ++ +G L S+VTE G N S GQRQL+CL R LL ++L+LDEATA+VD TD ++Q+++R+ F+D T++TIAHRI +V+DS+ +L+L HG + E+DS Sbjct: 1228 RPPEGWPSHGAIKFDHYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINITSIGLHDLRSRLAIIPQENQAFEGTIRENLDPNANATDEEIWHALEAASLKQFIQTLDGGLYSRVTEGGANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIRERFNDRTILTIAHRINTVMDSNRILVLDHGKVVEFDS 1456 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |