FC931255

Overview
NameFC931255
Unique NameFC931255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15295 contig Ccv1_Contig15295:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP1_HUMAN (Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.458e-55
Identity = 108/230 (46.96%), Postives = 151/230 (65.65%), Query Frame = 1
Query:    1 RKSRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690
            +++ P  SWP  G+++ R+  +RY   + FVLR I+ T  G +K GIVGRTG+GKS+L   LFRI E A                   R +++IIPQDPV+F G++R N+DP  +Y+DE++W +L+   L D V     KLD +  E GEN S+GQRQLVCL R LL++ KIL+LDEATA+VD  TD+LIQ ++R  F DCTV+TIAHR+ +++D   V++L  G I+EY
Sbjct: 1279 QETAPPSSWPQVGRVEFRNYCLRYREDLDFVLRHINVTINGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGINIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKDFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEY 1508          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB2C_ARATH (ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.458e-55
Identity = 108/230 (46.96%), Postives = 148/230 (64.35%), Query Frame = 1
Query:    7 SRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696
            +RP   WPS G I   D+ +RY P +P VL G+S       K GIVGRTG+GKS+L+  LFRIVE                     R  L IIPQ PV+F GTVR N+DP  E+ D  +WE+L++  L D +R+    LD++V+E GEN+S+GQRQL+ L R LL+R KIL+LDEATA+VD  TD LIQ+++R+ F  CT++ IAHR+ ++ID D +L+L  G ++E+ S
Sbjct: 1230 NRPPPGWPSSGSIKFEDVVLRYRPQLPPVLHGVSFFIHPTDKVGIVGRTGAGKSSLLNALFRIVEVEKGRILIDDCDVGKFGLMDLRKVLGIIPQSPVLFSGTVRFNLDPFGEHNDADLWESLERAHLKDTIRRNPLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDKILVLDSGRVQEFSS 1459          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP3_HUMAN (Canalicular multispecific organic anion transporter 2 OS=Homo sapiens GN=ABCC3 PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 1.904e-55
Identity = 107/230 (46.52%), Postives = 149/230 (64.78%), Query Frame = 1
Query:    7 SRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696
            SRP   WP  G+++ R+  VRY P +  VLR +S    G +K GIVGRTG+GKS++   LFRI+E A                   R++L+IIPQDP++F GT+R N+DP   Y++E IW AL+   L   V  +   LD + +E GEN S+GQRQLVCL R LL++ +IL+LDEATA++D  TDNLIQ ++R  F  CTV+TIAHR+ +++D   VL+L  G++ E+DS
Sbjct: 1277 SRPPEGWPPRGEVEFRNYSVRYRPGLDLVLRDLSLHVHGGEKVGIVGRTGAGKSSMTLCLFRILEAAKGEIRIDGLNVADIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGSYSEEDIWWALELSHLHTFVSSQPAGLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLIQATIRTQFDTCTVLTIAHRLNTIMDYTRVLVLDKGVVAEFDS 1506          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP1_MACFA (Multidrug resistance-associated protein 1 OS=Macaca fascicularis GN=ABCC1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.105e-54
Identity = 106/230 (46.09%), Postives = 150/230 (65.22%), Query Frame = 1
Query:    1 RKSRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690
            +++ P  +WP  G+++ R+  +RY   + FVLR I+ T  G +K GIVGRTG+GKS+L   LFRI E A                   R +++IIPQDPV+F G++R N+DP  +Y+DE++W +L+   L   V     KLD +  E GEN S+GQRQLVCL R LL++ KIL+LDEATA+VD  TD+LIQ ++R  F DCTV+TIAHR+ +++D   V++L  G I+EY
Sbjct: 1279 QETAPPSNWPQVGRVEFRNYCLRYREDLDFVLRHINVTINGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGINIARIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKGFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEY 1508          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP3_MOUSE (Canalicular multispecific organic anion transporter 2 OS=Mus musculus GN=Abcc3 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.591e-54
Identity = 101/230 (43.91%), Postives = 149/230 (64.78%), Query Frame = 1
Query:    7 SRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696
            +R    WP+ G ++ R+  VRY P +  VL+ ++    G +K GIVGRTG+GKS++   LFRI+E A                   R++L+IIPQDP++F GT+R N+DP   Y++E IW AL+   L   V  +   LD +  E G+N S+GQRQLVCL R LL++ ++L+LDEATA++D  TD+LIQ ++R  F DCTV+TIAHR+ +++D + VL+L  G++ E+DS
Sbjct: 1273 NRAPEGWPTRGMVEFRNYSVRYRPGLELVLKNVTVHVQGGEKVGIVGRTGAGKSSMTLCLFRILEAAEGEIVIDGLNVAHIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGRYSEEDIWRALELSHLNTFVSSQPAGLDFQCAEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDS 1502          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP1_CANFA (Multidrug resistance-associated protein 1 OS=Canis familiaris GN=ABCC1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.782e-53
Identity = 104/225 (46.22%), Postives = 146/225 (64.89%), Query Frame = 1
Query:   13 PNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687
            P  +WP  G+++ RD  +RY  ++  VL+ I+ T  G +K GIVGRTG+GKS+L   LFRI E A                   R +++IIPQDPV+F G++R N+DP  +Y+DE++W +L+   L D V     KL+ +  E GEN S+GQRQLVCL R LL++ KIL+LDEATA+VD  TD+LIQ ++R  F DCTV+TIAHR+ +++D   V++L  G I E
Sbjct: 1283 PPSTWPQVGRVEFRDYGLRYRENLDLVLKHINITINGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDDINIAKIGLHDLRVKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKDFVSGLPDKLNQECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIRE 1507          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP3_RAT (Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus GN=Abcc3 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.328e-53
Identity = 101/230 (43.91%), Postives = 148/230 (64.35%), Query Frame = 1
Query:    7 SRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696
            +R    WP  G ++ R+  VRY P +  VL+ ++    G +K GIVGRTG+GKS++   LFRI+E A                   R++L+IIPQDP++F GT+R N+DP   Y+DE IW  L+   L   V  +   LD + +E G+N S+GQRQLVCL R LL++ ++L+LDEATA++D  TD+LIQ ++R  F DCTV+TIAHR+ +++D + VL+L  G++ E+DS
Sbjct: 1272 NRAPEGWPRSGVVEFRNYSVRYRPGLELVLKNLTLHVQGGEKVGIVGRTGAGKSSMTLCLFRILEAAEGEIFIDGLNVAHIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGRYSDEDIWRTLELSHLSAFVSSQPTGLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDS 1501          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP1_CHICK (Multidrug resistance-associated protein 1 OS=Gallus gallus GN=ABCC1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.328e-53
Identity = 103/231 (44.59%), Postives = 149/231 (64.50%), Query Frame = 1
Query:    4 KSRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696
            ++ P  +WP  GK++ R   +RY   +  VL+ I+ T  G +K GIVGRTG+GKS+L   LFRI E A                   R +++IIPQDP++F G++R N+DP ++++DE IW +L+   L + V     KL+ + +E GEN S+GQRQLVCL R LL++ KIL+LDEATA+VD  TDNLIQ +++  F +CTV+TIAHR+ +++D   VL+L  G + E DS
Sbjct: 1274 ETAPASTWPQEGKVEFRGFGLRYREDLDLVLKNINITINGGEKVGIVGRTGAGKSSLTLGLFRINEAAEGEIIIDGINIAKIGLHDLRFKITIIPQDPILFSGSLRMNLDPFDQHSDEDIWRSLELAHLKNFVSSLPDKLNHECSEGGENLSVGQRQLVCLARALLRKSKILVLDEATAAVDLETDNLIQSTIKSQFEECTVLTIAHRLNTIMDYTRVLVLDRGEVVECDS 1504          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP1_MOUSE (Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.040e-53
Identity = 104/229 (45.41%), Postives = 147/229 (64.19%), Query Frame = 1
Query:    1 RKSRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687
            +++ P  +WP  G+++ RD  +RY   +  VL+ I+ T  G +K GIVGRTG+GKS+L   LFRI E A                   R +++IIPQDPV+F G++R N+DP  +Y+DE++W AL+   L   V     KL+ +  E GEN S+GQRQLVCL R LL++ KIL+LDEATA+VD  TDNLIQ ++R  F DCTV+TIAHR+ +++D   V++L  G + E
Sbjct: 1276 QETAPPSTWPHSGRVEFRDYCLRYREDLDLVLKHINVTIEGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGVNIAKIGLHNLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVRE 1504          
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP1_BOVIN (Multidrug resistance-associated protein 1 OS=Bos taurus GN=ABCC1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.971e-53
Identity = 104/228 (45.61%), Postives = 146/228 (64.04%), Query Frame = 1
Query:   13 PNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696
            P   WP  G+++ RD  +RY   +  VL+ I+ T  G +K GIVGRTG+GKS+L   LFRI E A                   R +++IIPQDPV+F G++R N+DP  +Y+DE++W +L+   L   V     KL+ +  E GEN S+GQRQLVCL R LL++ KIL+LDEATA+VD  TD+LIQ ++R  F DCTV+TIAHR+ +++D   V++L  G I+E+ S
Sbjct: 1282 PPKDWPQVGRVEFRDYGLRYREDLDLVLKHINVTIDGGEKVGIVGRTGAGKSSLTLGLFRIKESAEGEIIIDDINIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWTSLELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEWGS 1509          
The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 455
Match NameE-valueIdentityDescription
MRP1_HUMAN1.458e-5546.96Multidrug resistance-associated protein 1 OS=Homo ... [more]
AB2C_ARATH1.458e-5546.96ABC transporter C family member 2 OS=Arabidopsis t... [more]
MRP3_HUMAN1.904e-5546.52Canalicular multispecific organic anion transporte... [more]
MRP1_MACFA2.105e-5446.09Multidrug resistance-associated protein 1 OS=Macac... [more]
MRP3_MOUSE3.591e-5443.91Canalicular multispecific organic anion transporte... [more]
MRP1_CANFA1.782e-5346.22Multidrug resistance-associated protein 1 OS=Canis... [more]
MRP3_RAT2.328e-5343.91Canalicular multispecific organic anion transporte... [more]
MRP1_CHICK2.328e-5344.59Multidrug resistance-associated protein 1 OS=Gallu... [more]
MRP1_MOUSE3.040e-5345.41Multidrug resistance-associated protein 1 OS=Mus m... [more]
MRP1_BOVIN3.971e-5345.61Multidrug resistance-associated protein 1 OS=Bos t... [more]

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Properties
Property NameValue
Genbank descriptionC34103B10EF PostHarvP1 Citrus clementina cDNA clone C34103B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bp
AGAAAAAGTCGGCCCAACCATTCTTGGCCATCACATGGGAAGATTGACCT
GCGTGATCTTCAGGTTCGCTATGCACCACACATGCCCTTTGTGTTGCGAG
GTATCTCGTGTACTTTCCCAGGGGAAAAGAAAACTGGTATTGTAGGGAGG
ACGGGCAGTGGTAAATCAACTCTCATTCAAACACTGTTCCGGATTGTTGA
ACCTGCTGCTGGTCAGATTCTTATAGATGGCATCGATATCTCATTGATTG
GACTACATGATTTGCGGACAAGACTAAGCATTATTCCCCAGGATCCTGTC
ATGTTTGAAGGGACTGTGCGAAGCAATGTAGACCCTCTTGAAGAATATAC
GGATGAGCAAATATGGGAGGCTCTGGATAAATGCCAACTTGGAGATGAAG
TTAGGAAGAAGGAAGGGAAACTAGATTCAAAAGTTACTGAGAATGGAGAG
AACTGGAGCATGGGCCAGAGACAGCTGGTATGTCTTGGCCGTGTGCTACT
GAAAAGAAGAAAAATCTTGATGCTTGATGAAGCTACGGCATCTGTTGACA
CTGCTACTGATAATCTGATCCAACAAAGTCTCCGGCAGCACTTCTCTGAC
TGCACAGTCATAACCATTGCTCATCGGATAACGTCTGTTATTGACAGTGA
TATGGTTCTGCTTCTCAGTCATGGACTCATCGAGGAATATGATTCCCC
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