FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.982e-62 Identity = 114/228 (50.00%), Postives = 155/228 (67.98%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 RP WP HG I +L +RY + VL+GISC ++K GIVGRTG+GKS+++ LFR++E + R L+IIPQDPV+F GT+R N+DP E TD+Q+W L QL D + EG LDSKVTENG+NWS+GQRQL+CL R LL+ KIL+LDEATASVD +D+LIQ ++R+ FS+CT++TIAHR+ +++DSD +++L G I E+D Sbjct: 1051 RPAPDWPPHGAITFDNLVMRYREGLDPVLKGISCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGAILIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENIDPFNEKTDDQLWSVLKDIQLHDVAKSLEGGLDSKVTENGDNWSVGQRQLLCLARALLRDPKILVLDEATASVDGHSDSLIQATIREKFSNCTILTIAHRLNTIMDSDRIIVLDAGKISEFD 1278
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP2_RAT (Canalicular multispecific organic anion transporter 1 OS=Rattus norvegicus GN=Abcc2 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.758e-60 Identity = 112/229 (48.91%), Postives = 155/229 (67.69%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 RP WP HG+I + QVRY P + VL+GI+C +K G+VGRTG+GKS+L LFRI+E A R RL+IIPQDP++F G++R N+DP +Y+DE++W AL+ L V + L S+VTE G+N S+GQRQL+CLGR +L++ KIL+LDEATA+VD TD+LIQ ++R+ FS CTVITIAHR+ +++DSD +++L +G I EY S Sbjct: 1285 RPPADWPRHGEIQFNNYQVRYRPELDLVLKGITCNIKSGEKVGVVGRTGAGKSSLTNCLFRILESAGGQIIIDGIDVASIGLHDLRERLTIIPQDPILFSGSLRMNLDPFNKYSDEEVWRALELAHLRSFVSGLQLGLLSEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRKEFSQCTVITIAHRLHTIMDSDKIMVLDNGKIVEYGS 1513
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP5_RAT (Multidrug resistance-associated protein 5 OS=Rattus norvegicus GN=Abcc5 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59 Identity = 106/232 (45.69%), Postives = 164/232 (70.69%), Query Frame = 1 Query: 1 RKSRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 + P H WP G+I + ++RY ++P VL+ +S T ++K GIVGRTGSGKS+L LFR+VE + R++L+IIPQ+PV+F GTVRSN+DP +YT+EQIW+AL++ + + + + KL+S+V ENG+N+S+G+RQL+C+ R LL+ KIL+LDEATA++DT TD LIQ+++R+ F+DCT++TIAHR+ +V+ SD +++L+ G + E+D+ Sbjct: 1178 KNKAPPHDWPQEGEITFENAEMRYRENLPLVLKKVSFTIKPKEKIGIVGRTGSGKSSLGMALFRLVELSGGCIKIDGVRISDIGLADLRSKLTIIPQEPVLFSGTVRSNLDPFNQYTEEQIWDALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAFADCTMLTIAHRLHTVLGSDRIMVLAQGQVVEFDT 1409
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCC8_DICDI (ABC transporter C family member 8 OS=Dictyostelium discoideum GN=abcC8 PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.079e-58 Identity = 108/225 (48.00%), Postives = 157/225 (69.78%), Query Frame = 1 Query: 22 SWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 SWPSHGKI ++L + Y + VLRGI+CT + K GIVGRTG+GKS+L Q LFR+VEP R+R++IIPQDPV+F G+VR N+DP ++Y D +IWEA++ L ++ +G LD+ V + G+N+S+GQRQL+ +GR LLK+ I++LDEA++S+D A+D LIQ+++R F+DCTV+TIAHR+ ++ DSD +++L G + EYDS Sbjct: 1337 SWPSHGKIVFKNLWLTYREGLDPVLRGINCTIEPKTKVGIVGRTGAGKSSLTQALFRLVEPLRGTIEIDGIDITELGLNPLRSRMAIIPQDPVLFAGSVRYNLDPFDQYDDHEIWEAIENAHLLKAIKDLDGGLDAMVQDGGDNFSVGQRQLLVIGRALLKKANIIVLDEASSSIDIASDALIQETIRTKFADCTVLTIAHRLGTIADSDKIMVLDKGELIEYDS 1561
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP5_MOUSE (Multidrug resistance-associated protein 5 OS=Mus musculus GN=Abcc5 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.403e-58 Identity = 104/232 (44.83%), Postives = 164/232 (70.69%), Query Frame = 1 Query: 1 RKSRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 + P H WP G++ + ++RY ++P VL+ +S T ++K GIVGRTGSGKS+L LFR+VE + R++L+IIPQ+PV+F GTVRSN+DP +YT++QIW+AL++ + + + + KL+S+V ENG+N+S+G+RQL+C+ R LL+ KIL+LDEATA++DT TD LIQ+++R+ F+DCT++TIAHR+ +V+ SD +++L+ G + E+D+ Sbjct: 1178 KNKAPPHDWPQEGEVTFENAEMRYRENLPLVLKKVSFTIKPKEKIGIVGRTGSGKSSLGMALFRLVELSGGCIKIDGIRISDIGLADLRSKLAIIPQEPVLFSGTVRSNLDPFNQYTEDQIWDALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAFADCTMLTIAHRLHTVLGSDRIMVLAQGQVVEFDT 1409
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP5_HUMAN (Multidrug resistance-associated protein 5 OS=Homo sapiens GN=ABCC5 PE=1 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 6.993e-58 Identity = 104/232 (44.83%), Postives = 164/232 (70.69%), Query Frame = 1 Query: 1 RKSRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 + P+ WP G++ + ++RY ++P VL+ +S T ++K GIVGRTGSGKS+L LFR+VE + R++LSIIPQ+PV+F GTVRSN+DP +YT++QIW+AL++ + + + + KL+S+V ENG+N+S+G+RQL+C+ R LL+ KIL+LDEATA++DT TD LIQ+++R+ F+DCT++TIAHR+ +V+ SD +++L+ G + E+D+ Sbjct: 1179 KNKAPSPDWPQEGEVTFENAEMRYRENLPLVLKKVSFTIKPKEKIGIVGRTGSGKSSLGMALFRLVELSGGCIKIDGVRISDIGLADLRSKLSIIPQEPVLFSGTVRSNLDPFNQYTEDQIWDALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAFADCTMLTIAHRLHTVLGSDRIMVLAQGQVVEFDT 1410 HSP 2 Score: 72.4034 bits (176), Expect = 2.604e-12 Identity = 50/199 (25.13%), Postives = 85/199 (42.71%), Query Frame = 1 Query: 94 LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDN-LIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 L I K GI G GSGK++LI + + + Q + T+R N+ +EY +E+ L+ C L ++ +++ E G N S GQRQ + L R L R I +LD+ +++D N + ++R+H TV+ + H++ ++D D V+ + G I E Sbjct: 578 LHSIDLEIQEGKLVGICGSVGSGKTSLISAIL-------------GQMTLLEGSIAISGTFAYVAQQAWILNATLRDNILFGKEYDEERYNSVLNSCCLRPDLAILPSSDLTEIGERGANLSGGQRQRISLARALYSDRSIYILDDPLSALDAHVGNHIFNSAIRKHLKSKTVLFVTHQLQYLVDCDEVIFMKEGCITE 763
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP2_HUMAN (Canalicular multispecific organic anion transporter 1 OS=Homo sapiens GN=ABCC2 PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 9.133e-58 Identity = 113/229 (49.34%), Postives = 151/229 (65.94%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 RP WPS GKI + QVRY P + VLRGI+C +K G+VGRTG+GKS+L LFRI+E A R +L+IIPQDP++F G++R N+DP Y+DE+IW+AL+ L V + L +VTE G N S+GQRQL+CLGR LL++ KIL+LDEATA+VD TDNLIQ +++ F+ CTVITIAHR+ +++DSD V++L +G I E S Sbjct: 1289 RPPPDWPSKGKIQFNNYQVRYRPELDLVLRGITCDIGSMEKIGVVGRTGAGKSSLTNCLFRILEAAGGQIIIDGVDIASIGLHDLREKLTIIPQDPILFSGSLRMNLDPFNNYSDEEIWKALELAHLKSFVASLQLGLSHEVTEAGGNLSIGQRQLLCLGRALLRKSKILVLDEATAAVDLETDNLIQTTIQNEFAHCTVITIAHRLHTIMDSDKVMVLDNGKIIECGS 1517
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP2_MOUSE (Canalicular multispecific organic anion transporter 1 OS=Mus musculus GN=Abcc2 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.558e-57 Identity = 110/229 (48.03%), Postives = 150/229 (65.50%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 +P WP G+I + QVRY P + VL+GI+C +K G+VGRTG+GKS+L LFRI+E A R RL+IIPQDP++F G +R N+DP +Y+DE+IW AL+ L V + L +VTE G+N S+GQRQL+CLGR +L++ KIL+LDEATA+VD TD+LIQ ++R FS CTVITIAHR+ +++DSD +++L G I EY S Sbjct: 1287 KPPADWPKKGEIQFNNYQVRYRPELDLVLKGITCNIKSTEKVGVVGRTGAGKSSLTNCLFRILESAGGQIIIDGIDIASIGLHDLRGRLTIIPQDPILFSGNLRMNLDPFNKYSDEEIWRALELAHLKSFVAGLQLGLLHEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRNEFSQCTVITIAHRLHTIMDSDKIMVLDSGKIVEYGS 1515
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP9_RAT (Multidrug resistance-associated protein 9 OS=Rattus norvegicus GN=Abcc12 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.035e-57 Identity = 104/223 (46.64%), Postives = 154/223 (69.06%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 WPS G+I +D ++RY + P VL G++ + GIVGRTGSGKS+L LFR+VEPA+ RT+L++IPQDPV+F GTVR N+DPL +TDE +W L++ + D + K KL ++VTENGEN+S+G+RQL+C+ R LL+ KI++LDEATAS+D+ TD L+Q ++++ F CTV+TIAHR+ +V++ D+VL++ +G + E+D Sbjct: 1121 WPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIFIDEVDICTVGLEELRTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHRLNTVLNCDLVLVMENGKVIEFD 1343
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MRP9_MOUSE (Multidrug resistance-associated protein 9 OS=Mus musculus GN=Abcc12 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.035e-57 Identity = 104/223 (46.64%), Postives = 154/223 (69.06%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 693 WPS G+I +D ++RY + P VL G++ + GIVGRTGSGKS+L LFR+VEPA+ RT+L++IPQDPV+F GTVR N+DPL +TDE +W L++ + D + K KL ++VTENGEN+S+G+RQL+C+ R LL+ KI++LDEATAS+D+ TD L+Q ++++ F CTV+TIAHR+ +V++ D+VL++ +G + E+D Sbjct: 1121 WPSRGEITFKDYRMRYRDNTPLVLDGLNLNIQSGQTVGIVGRTGSGKSSLGMALFRLVEPASGTIIIDEVDICTVGLEDLRTKLTMIPQDPVLFVGTVRYNLDPLGSHTDEMLWHVLERTFMRDTIMKLPEKLQAEVTENGENFSVGERQLLCMARALLRNSKIILLDEATASMDSKTDTLVQSTIKEAFKSCTVLTIAHRLNTVLNCDLVLVMENGKVIEFD 1343 HSP 2 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 52/200 (26.00%), Postives = 89/200 (44.50%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDT-ATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 VL IS K GI G GSGKS+LI L ++ L+ + Q +F G VR N+ E+Y ++ + C L ++ +++ E G N S GQRQ + L R + R++ +LD+ ++VD ++ ++ +++ TV+ + H++ + D V+LL G I E Sbjct: 496 VLHNISFVVRKGKVLGICGNVGSGKSSLISALLGQMQ-------------LQKGVVAVNGPLAYVSQQAWIFHGNVRENILFGEKYNHQRYQHTVHVCGLQKDLNSLPYGDLTEIGERGVNLSGGQRQRISLARAVYANRQLYLLDDPLSAVDAHVGKHVFEECIKKTLKGKTVVLVTHQLQFLESCDEVILLEDGEICE 682 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |