FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB6_XENTR (ATP-binding cassette sub-family B member 6, mitochondrial OS=Xenopus tropicalis GN=abcb6 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27 Identity = 71/218 (32.57%), Postives = 118/218 (54.13%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 GKI+ ++ Y +LR IS T + +VG +GSGKST+I+ LFR + R+ + ++PQD V+F T+R+N+ TD+++ EA + + + D++ E G S G++Q V + R +LK +I++LDEAT+++DT T+ IQ SL + ++ T I +AHR+++VI+SD +L+L G I E Sbjct: 579 GKIEFENVHFSYLDGKE-ILRDISFTVMPGQSIALVGPSGSGKSTIIRLLFRFYDVKGGTIKVDGQDISTVRQESLRSHIGVVPQDTVLFNDTIRNNIRYGRVSATDDEVEEAAAAADIHERILSFRDGYDTQTGERGLKLSGGEKQRVAIARTILKAPQIILLDEATSALDTETERNIQASLAKVCANRTTIVVAHRLSTVINSDQILVLKEGQIVE 795
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB7B_ARATH (ABC transporter B family member 7 OS=Arabidopsis thaliana GN=ABCB7 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.089e-26 Identity = 69/220 (31.36%), Postives = 121/220 (55.00%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSN-VDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+LRD+ RY P P V G S T P +VG++GSGKST+I + R +P + R+++ ++ Q+P++F T+R N V ++ +D++I AL + + K L++ V E+G S GQ+Q + + R +LK KIL+LDEAT+++D ++ ++Q +L + T + +AHR+T++ +DM+ ++ G + E Sbjct: 355 GDIELRDVYFRY-PARPDVQIFVGFSLTVPNGMTVALVGQSGSGKSTVISLIERFYDPESGEVLIDGIDLKKFQVKWIRSKIGLVSQEPILFATTIRENIVYGKKDASDQEIRTALKLANASNFIDKLPQGLETMVGEHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQDALVKLMLSRTTVVVAHRLTTIRTADMIAVVQQGKVIE 573 HSP 2 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 65/222 (29.28%), Postives = 117/222 (52.70%), Query Frame = 1 Query: 34 HGKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 HG I+L+ + RY P P + + T + +VG +GSGKST+I L R +P + R ++ ++ Q+PV+F T+ SN+ + T+E+I A + + + ++ V E G S GQ+Q + + R +LK KIL+LDEAT+++D ++ ++Q +L Q + T + +AH +T++ D+DM+ ++ +G+I E Sbjct: 1002 HGDIELQHVSFRY-PMRPDIQIFSDLCLTISSGQTVALVGESGSGKSTVISLLERFYDPDSGKILLDQVEIQSLKLSWLREQMGLVSQEPVLFNETIGSNIAYGKIGGATEEEIITAAKAANVHNFISSLPQGYETSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQDALDQVMVNRTTVVVAHLLTTIKDADMIAVVKNGVIAE 1222
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_YEAST (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Saccharomyces cerevisiae GN=ATM1 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.404e-26 Identity = 65/202 (32.18%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 +L+ S T P KT IVG +GSGKST+++ +FR +P + R + ++PQD +F T+ NV + TDE++ ++K QL ++K D+ V E G S G++Q + + RVLLK +I+ DEAT+++DT T+ + +++R +F+ T + IAHR+ ++ D+D +++L +G + E Sbjct: 451 ILKNASFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDPESGRILINGRDIKEYDIDALRKVIGVVPQDTPLFNDTIWENVKFGRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERGLMISGGEKQRLAIARVLLKNARIMFFDEATSALDTHTEQALLRTIRDNFTSGSRTSVYIAHRLRTIADADKIIVLDNGRVRE 652
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_NEUCR (Iron-sulfur clusters transporter atm-1, mitochondrial OS=Neurospora crassa GN=atm-1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.572e-25 Identity = 71/225 (31.56%), Postives = 115/225 (51.11%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATD-------NLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+I+ +D+ Y P P +LR +S T P KK IVG +G GKSTL++ LFR +P R + ++PQD +F TV N+ T EQ+ EA + +++ ++KV E G S G++Q + + R++LK +L DEAT+++DT T+ N I + L Q T + +AHR+ ++ DSD++++L G + E Sbjct: 447 GEIEFKDVTFGYHPESP-ILRDLSLTIPAGKKVAIVGPSGCGKSTLLRLLFRFYDPQKGAIYIDGQDIRSVTLESLRRAIGVVPQDTPLFNDTVEHNIRYGNLSATPEQVIEAAKAAHIHEKIISWRDGYNTKVGERGLMISGGEKQRLAVSRLILKDPPLLFFDEATSALDTHTEQALMENINAILKGLGQKGEKKTSLFVAHRLRTIYDSDLIIVLKEGRVAE 670
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_CANGA (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Candida glabrata GN=ATM1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.572e-25 Identity = 66/202 (32.67%), Postives = 110/202 (54.46%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 +L+ S T P KT I G +GSGKST+++ +FR +P R + ++PQD +F T+ NV E +DE+I +DK QL D + K + V E G S G++Q + + RVLLK I+ DEAT+++DT T+ + +++R++F+ + T + IAHR+ ++ D+D +++L G + E Sbjct: 480 ILKNASFTIPAGMKTAIAGPSGSGKSTVLKLVFRFYDPEEGRVLVNGVDVREYDIDQLRKAIGVVPQDTPLFNDTIWENVKFGRIEASDEEITRVIDKAQLSDLIAKLPQGSSTIVGERGLMISGGEKQRLAIARVLLKDADIMFFDEATSALDTHTEQSLLRTIRRNFNSGEKTSVYIAHRLRTIADADKIIVLEEGTVRE 681
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDR1_LEIEN (Multidrug resistance protein 1 OS=Leishmania enriettii GN=MDR1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 73/222 (32.88%), Postives = 117/222 (52.70%), Query Frame = 1 Query: 43 IDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEE-YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLR--QHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 I+ R++Q Y+ VL ++ F G++G+TG GKST+IQ L R E + R +SI+ Q+P +F GTVR N+ E TDE++ EA + E+ K D++V G S GQ+Q + + R LL+R ++L+LDEAT+++D+ T+ +Q+ + Q T ++IAHR+T++ D ++LL G I E S Sbjct: 1036 IEYRNVQFIYSARPKQVVLASVNMRFGDATSNGLIGQTGCGKSTVIQMLARFYERRSGLISVNGRDLSSLDIAEWRRNISIVLQEPNLFSGTVRENIRYAREGATDEEVEEAARLAHIHHEIIKWTDGYDTEVGYKGRALSGGQKQRIAIARGLLRRPRLLLLDEATSALDSVTEAKVQEGIEAFQAKYKVTTVSIAHRLTTIRHCDQIILLDSGCIIEQGS 1257 HSP 2 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 61/214 (28.50%), Postives = 105/214 (49.07%), Query Frame = 1 Query: 43 IDLRDLQVRYAPHMPFVL-RGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ--HFSDCTVITIAHRITSVIDSDMVLLLSH 672 I+ R+++ Y +L R +S +K G +G GKS++I + R +P R ++ I+ Q+P +F GT+ NV + TDE++ EA + + D + + D+ V G S GQ+Q + + R L+KR IL+LDEAT+++D ++ +Q +L Q TV+ IAHR+ ++ D D + + H Sbjct: 391 IEFRNVRFAYPTRPGMILFRDLSLKIKCGQKVAFSGASGCGKSSVIGLIQRFYDPIGGAVLVDGVRMRELCLREWRDQIGIVSQEPNLFAGTMMENVRMGKPNATDEEVVEACRQANIHDTIMALPDRYDTPVGPVGSLLSGGQKQRIAIARALVKRPPILLLDEATSALDRKSEMEVQAALDQLIQRGGTTVVVIAHRLATIRDMDRIYYVKH 604
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: EXP8_STRPN (Putative ABC transporter ATP-binding protein exp8 OS=Streptococcus pneumoniae GN=exp8 PE=3 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 65/199 (32.66%), Postives = 108/199 (54.27%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 +L IS + + VG TGSGKS++I L R E + R + ++ Q+P ++ GT++SN+ +E +DEQ+ A +++ DS V+E G ++S GQRQL+ R + + KIL+LDEATA++D+ T++L+Q SL + T I IAHR++++ D++ + +L G I E Sbjct: 356 ILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLVLQEPFLYHGTIKSNIAMYQETSDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTGQRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQDANCIYVLDKGRIIE 554
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_KLULA (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Kluyveromyces lactis GN=ATM1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 66/202 (32.67%), Postives = 112/202 (55.45%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDC--TVITIAHRITSVIDSDMVLLLSHGLIEE 687 +L+ + T KKT IVG +GSGKST+++ +FR +P R + ++PQD +F T+ NV TD +I A++K QL D + K ++ V E G S G++Q + + RVLLK I+ DEAT+++DT T+ + ++++++FSD T + IAHR+ ++ D+D +++L +G + E Sbjct: 471 ILKNATFTIAPGKKTAIVGPSGSGKSTILRLVFRFYDPQQGRILLDGKDIRELDLDELRRIVGVVPQDTPLFNDTIWENVKFGRINATDNEIVTAIEKAQLSDLIHKLPKGTETIVGERGLMISGGEKQRLAIARVLLKDTPIMFFDEATSALDTHTEQSLLKTIKENFSDVAKTSVYIAHRLRTIADADKIIVLENGAVRE 672
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCBA_MOUSE (ATP-binding cassette sub-family B member 10, mitochondrial OS=Mus musculus GN=Abcb10 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25 Identity = 69/224 (30.80%), Postives = 119/224 (53.12%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMP--FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV----DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690 G ++ R++ Y P P V + S + P T +VG +GSGKST++ L R+ +P + R+++ + Q+PV+F +V N+ D L T +Q+ A + + +R D+ V E G S GQ+Q + + R LLK KIL+LDEAT+++D ++L+Q++L + TV+ IAHR++++ +++ V +L HG I E+ Sbjct: 455 GALEFRNVHFTY-PARPEVSVFQDFSLSIPSGSVTALVGPSGSGKSTVVSLLLRLYDPNSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSVAENIAYGADNLSSVTAQQVERAAEVANAAEFIRSFPQGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEHLVQEALDRLMEGRTVLIIAHRLSTIKNANFVAVLDHGKICEH 677
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_BORA1 (Lipid A export ATP-binding/permease protein msbA OS=Bordetella avium (strain 197N) GN=msbA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 72/223 (32.29%), Postives = 116/223 (52.02%), Query Frame = 1 Query: 28 PSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD--PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690 P GKI+ R + R+ + +S T + +VGR+GSGK+TL+ L R V P R+ LS++ QD V+F+ T+ +NV L + D++I +AL L D V + + V EN S GQRQ + + R L+K IL+LDEAT+++D ++ +Q SL + T + IAHR+++V ++D +++L G I E+ Sbjct: 345 PVRGKIEFRQIGHRFPEADRNTISDVSFTVEPGQTVALVGRSGSGKTTLVNMLPRFVLPTEGSILIDDVPINDVQLNSLRSHLSLVSQDVVLFDDTIAANVGYGALGKADDQRIHDALAAANLRDFVDSLPKGIHTPVGENAARLSGGQRQRLAIARALIKNAPILILDEATSALDNESERQVQSSLDRLMRGRTTLVIAHRLSTVQNADRIIVLDAGRIVEH 567 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |