FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_ASHGO (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Ashbya gossypii GN=ATM1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 72/234 (30.77%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 4 KSRPN-HSWPSHGKIDLR--DLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 K+ PN + P H +D+R ++ Y P +L +S T P KT IVG +GSGKST+++ +FR EP R + ++PQD +F T+ NV +D++I A++K QL ++ + V E G S G++Q + + RVLLK ++ DEAT+++DT T+ + +++Q+FS T + +AHR+ ++ D+D +++L G + E Sbjct: 419 KNSPNAQNLPIHKPLDIRFENVTFGYDPERR-ILNNVSFTIPAGMKTAIVGPSGSGKSTILKLVFRFYEPEQGRILVGGTDIRDLDLLSLRKAIGVVPQDTPLFNDTIWENVKFGNISSSDDEILRAIEKAQLTKLLQNLPKGASTVVGERGLMISGGEKQRLAIARVLLKDAPLMFFDEATSALDTHTEQALLHTIQQNFSSNSKTSVYVAHRLRTIADADKIIVLEQGSVRE 651
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB5_DICDI (ABC transporter B family member 5 OS=Dictyostelium discoideum GN=abcB5 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 69/217 (31.80%), Postives = 114/217 (52.53%), Query Frame = 1 Query: 34 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHG 675 +G I RD+ +Y + VL +S G K+ IVG +GSGKSTL++ L+R + ++ R + ++PQD V+F T+ N+ +P T EQ+ A + + + + D+ V E G S G++Q V + R +LK I+ DEAT+S+DT + LI +LR+ F T I IAHR+++++D+D +++L G Sbjct: 457 NGTIVFRDISFKYNDSVQ-VLNNVSFECEGGKRIAIVGSSGSGKSTLLRLLYRFYDVSSGSIEIDGQDIRGIQLESLRKHIGVVPQDTVLFNDTIYYNIAYGNP--NATKEQVENAARAAHIHEVILNMKNGYDTVVGERGLKLSGGEKQRVSIARAILKDSPIVFYDEATSSLDTEKEKLIMDALRELFKGRTTIMIAHRLSTIVDADEIIVLGTG 670
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB1_DICDI (ABC transporter B family member 1 OS=Dictyostelium discoideum GN=abcB1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 69/220 (31.36%), Postives = 123/220 (55.91%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMP--FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+I+L+D++ Y P P VL+G++ T +VG +G GKST+I + R +P + R + + Q+PV+F G+++ N+ + T +QI A +K + + E D+ V E G S GQ+Q V + R +++ IL+LDEAT+++D ++ L++Q++ + D TVI IAHR+++VI+++ V++++ G IEE Sbjct: 664 GEIELKDVEFSY-PTRPNNSVLKGLNLKLSKGTITALVGPSGGGKSTVIAMIERFYDPNSGSITFDGIDIKELDPVWYRGIIGYVSQEPVLFAGSIKDNITFGNDSATMDQIISAAEKANAHSFIEEFENGYDTIVGERGVRLSGGQKQRVAIARAMIQNPMILLLDEATSALDAESEYLVKQAIDEIMKDRTVIVIAHRLSTVINANTVVVINQGKIEE 882
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB24B_ARATH (ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana GN=ABCB24 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.503e-25 Identity = 69/218 (31.65%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++ Y P +L GIS P K IVG +GSGKST+++ +FR + + R+ + ++PQD V+F T+ N+ T+E+++ A + + D + K K + V E G S G++Q V L R LK IL+ DEAT+++D+ T+ I ++LR S+ T I IAHR+T+ + D +L++ G + E Sbjct: 437 GSISFENVHFSYLPERK-ILDGISFEVPAGKSVAIVGSSGSGKSTILRMIFRFFDVDSGNVKIDGQDIKEVRLESLRSSIGVVPQDTVLFNDTIFHNIHYGNLSATEEEVYNAARRAAIHDTIMKFPDKYSTAVGERGLMLSGGEKQRVALARAFLKSPAILLCDEATSALDSKTEAEIMKTLRSLASNRTCIFIAHRLTTAMQCDEILVMEKGKVVE 653
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB4B_ARATH (ABC transporter B family member 4 OS=Arabidopsis thaliana GN=ABCB4 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 67/223 (30.04%), Postives = 121/223 (54.26%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPF--VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G I+L+D+ Y P P + RG S +VG++GSGKST++ + R +P A R+++ ++ Q+PV+F +++ N+ E+ T E+I A + V K LD+ V E+G S GQ+Q + + R +LK +IL+LDEAT+++D ++ ++Q++L + + T + +AHR+++V ++DM+ ++ G I E S Sbjct: 382 GDIELKDVYFTY-PARPDEQIFRGFSLFISSGTTVALVGQSGSGKSTVVSLIERFYDPQAGDVLIDGINLKEFQLKWIRSKIGLVSQEPVLFTASIKDNIAYGKEDATTEEIKAAAELANASKFVDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGS 603 HSP 2 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 59/221 (26.70%), Postives = 118/221 (53.39%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE--EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+LR + +Y P P V + + + K +VG +GSGKST+I L R +P + R + ++ Q+P++F T+R+N+ + + ++ +I + + + + D+ V E G S GQ+Q V + R ++K K+L+LDEAT+++D ++ ++Q +L + + T I +AHR++++ ++D++ ++ +G+I E Sbjct: 1040 GDIELRHVSFKY-PARPDVQIFQDLCLSIRAGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGVEIKSLRLKWLRQQTGLVSQEPILFNETIRANIAYGKGGDASESEIVSSAELSNAHGFISGLQQGYDTMVGERGIQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIVE 1259
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LMRA_LACLA (Multidrug resistance ABC transporter ATP-binding and permease protein OS=Lactococcus lactis subsp. lactis GN=lmrA PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 65/199 (32.66%), Postives = 104/199 (52.26%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 +LR IS G +G GKST+ L R +P A R+++ + QD + GT+R N+ LE +YTDE +W+ LD V +L+++V E G S GQRQ + + R L+ KILMLDEATAS+D+ +++++Q++L T + IAHR+++++D+D + + G I Sbjct: 364 ILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQI 562
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_DEBHA (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Debaryomyces hansenii GN=ATM1 PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 68/220 (30.91%), Postives = 120/220 (54.55%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSD--CTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+I ++ Y P P +L+ S T P +K IVG +GSGKST+++ +FR + + R + I+PQD +F T+ N+ + TD++I E +DK QL + +++ V E G S G++Q + + R+LLKR I + DEAT+++DT T+ + +++R+ + T I IAHR+ ++ D+D +++L+ G ++E Sbjct: 436 GEIKFENVTFGYHPDRP-ILQNASFTIPAGEKIAIVGPSGSGKSTILRLIFRFYDVESGKIFIDGQDISKVTVESLRRSIGIVPQDTPLFNDTILENIRYGRLDATDKEIHEMIDKVQLTKLIEDSPNGVNTIVGERGMMISGGEKQRLAIARLLLKRAPITLFDEATSALDTHTEQSLLRTIRKVLTKKANTHIAIAHRLRTIADADKIIVLNKGQVQE 654
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCBB_RABIT (Bile salt export pump OS=Oryctolagus cuniculus GN=ABCB11 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 72/233 (30.90%), Postives = 120/233 (51.50%), Query Frame = 1 Query: 7 SRPNHSWPS-HGKIDLRDLQVRYAPHMPF--VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 S W + GKID D + Y P P VL G+S + + VG +G GKST IQ L R +P R+ + I+ Q+PV+F +++ N+ D +E E+I A K Q+ D V K ++ V G S G++Q + + R +++ KIL+LDEAT+++DT ++ +Q +L + T I IAHR++++ +SD++ ++S G++ E Sbjct: 1065 SSAGEKWDNFQGKIDFVDCKFTY-PSRPDIQVLNGLSVSMSPRQTLAFVGSSGCGKSTSIQLLERFYDPDHGKVMIDGHDSRKVNIQFLRSNIGIVSQEPVLFACSIKDNIKYGDNTQEIPMERIIAAAKKAQVHDFVMSLPEKYETNVGSQGSQLSRGEKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQVALDKAREGRTCIVIAHRLSTIQNSDIIAVMSQGMVIE 1296 HSP 2 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 59/220 (26.82%), Postives = 110/220 (50.00%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+I+ ++ Y P P V L +S + T +VG +G+GKST +Q + R P R ++ I+ Q+PV+F T+ + E+ T E + +A + + + + D+ V E G S GQ+Q V + R L++ KIL+LD AT+++D ++ ++Q++L + T++++AHR ++ +D+++ HG E Sbjct: 418 GEIEFHNVTFHY-PSRPEVKILNNLSMVIKPGEMTALVGPSGAGKSTALQLIHRFYGPTEGMVTVESHDIRSSHIQWLRNQIGIVEQEPVLFFHTIAEKIRYGREDATMEDLIQAAKEANAYNFIMDLPQQFDTLVGEGGGQMSGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEALSKTQHGHTIVSVAHRPATIRTADVIIGCEHGAAVE 636
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB7_MOUSE (ATP-binding cassette sub-family B member 7, mitochondrial OS=Mus musculus GN=Abcb7 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 65/200 (32.50%), Postives = 106/200 (53.00%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 VL G+S P KK IVG +GSGKST+++ LFR EP R + ++PQD V+F T+ N+ + E+++ L D + + D++V E G S G++Q V + R +LK +++ DEAT+S+D+ T+ I ++R T I IAHR+++V+D+D +++LS G + E Sbjct: 487 VLNGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNLQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYGNINASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKNPPVILYDEATSSLDSITEETILGAMRDVVKHRTSIFIAHRLSTVVDADEIIVLSQGKVAE 686
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_HAEIN (Lipid A export ATP-binding/permease protein msbA OS=Haemophilus influenzae GN=msbA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 64/222 (28.83%), Postives = 115/222 (51.80%), Query Frame = 1 Query: 28 PSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD--PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 P+ G+++ +++ Y L IS + P K +VGR+GSGKST+ + R + R +++ Q +F T+ +N+ ++Y+ E+I A + + K D+ + ENG + S GQRQ + + R LL+ +L+LDEAT+++DT ++ IQ +L + D TV+ IAHR++++ ++D +L++ HG I E Sbjct: 342 PAKGELEFKNVSFAYQGKDELALNNISFSVPAGKTVALVGRSGSGKSTIANLVTRFYDIEQGEILLDGVNIQDYRLSNLRENCAVVSQQVHLFNDTIANNIAYAAQDKYSREEIIAAAKAAYALEFIEKLPQVFDTVIGENGTSLSGGQRQRLAIARALLRNSPVLILDEATSALDTESERAIQSALEELKKDRTVVVIAHRLSTIENADEILVIDHGEIRE 563 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |