FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB3B_ARATH (ABC transporter B family member 3 OS=Arabidopsis thaliana GN=ABCB3 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.965e-24 Identity = 66/222 (29.73%), Postives = 118/222 (53.15%), Query Frame = 1 Query: 37 GKIDLRDLQVRY-APHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G+I+LRD+ Y A M V G S P +VG +GSGKS++I + R +P++ R ++ ++ Q+PV+F ++ N+ E T E+I A + + K L++ V E+G S GQ+Q + + R +LK +IL+LDEAT+++D ++ ++Q++L + T + +AHR+++V ++DM+ ++ G I E S Sbjct: 346 GEIELRDVCFSYPARPMEEVFGGFSLLIPSGATAALVGESGSGKSSVISLIERFYDPSSGSVLIDGVNLKEFQLKWIRGKIGLVSQEPVLFSSSIMENIGYGKENATVEEIQAAAKLANAANFIDKLPRGLETLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMMSRTTVIVAHRLSTVRNADMIAVIHRGKIVEEGS 567 HSP 2 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 55/202 (27.23%), Postives = 108/202 (53.47%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 + R + + +VG +GSGKST+I L R +P + R ++ ++ Q+PV+F T+RSN+ +E ++ +I A + + + D+ V E G S GQ+Q V + R ++K KIL+LDEAT+++D ++ ++Q +L + + T + +AHR++++ ++D++ ++ +G+I E Sbjct: 1001 IFRDLCFAIRAGQTVALVGESGSGKSTVISLLQRFYDPDSGHITLDRVELKKLQLKWVRQQMGLVGQEPVLFNDTIRSNIAYGKGGDEASEAEIIAAAELANAHGFISSIQQGYDTVVGERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVE 1202
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB21B_ARATH (ABC transporter B family member 21 OS=Arabidopsis thaliana GN=ABCB21 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.965e-24 Identity = 64/223 (28.70%), Postives = 121/223 (54.26%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPF--VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G I+L ++ Y P P + RG S + +VG++GSGKST++ + R +P + R+++ ++ Q+PV+F +++ N+ E T E+I +A + + K LD+ V E+G S GQ+Q + + R +LK +IL+LDEAT+++D ++ ++Q++L + + T + +AHR+++V ++DM+ ++ G I E S Sbjct: 401 GDIELNNVNFSY-PARPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEVRIDGINLKEFQLKWIRSKIGLVSQEPVLFTSSIKENIAYGKENATVEEIRKATELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGS 622 HSP 2 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 61/221 (27.60%), Postives = 118/221 (53.39%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE--EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+LR + +Y P P V + + + K +VG +GSGKST+I L R +P + R + ++ Q+PV+F T+R+N+ + + T+ +I A + + + D+ V E G S GQ+Q V + R ++K K+L+LDEAT+++D ++ ++Q +L + + T + +AHR++++ ++D++ ++ +G+I E Sbjct: 1046 GDIELRHISFKY-PSRPDVQIFQDLCLSIRAGKTIALVGESGSGKSTVIALLQRFYDPDSGQITLDGVEIKTLQLKWLRQQTGLVSQEPVLFNETIRANIAYGKGGDATETEIVSAAELSNAHGFISGLQQGYDTMVGERGVQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVE 1265
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_MANSM (Lipid A export ATP-binding/permease protein msbA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=msbA PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24 Identity = 68/222 (30.63%), Postives = 113/222 (50.90%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD--PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G + +D+ Y L+ +S P K +VGR+GSGKST+ + R + RT S++ Q +F T+ +N+ ++Y+ EQI A + + E LD+ + ENG + S GQRQ + + R LL+ +L+LDEAT+++DT ++ IQ +L + D TV+ IAHR++++ +D +L++ HG I E S Sbjct: 343 GDVSFKDVSFTYQGKDQPALKHLSFDIPHGKTFALVGRSGSGKSTIANLVTRFYDINQGEILLDGVNVQDYTLSNLRTHCSVVSQQVHLFNDTIANNIAYAAKDKYSREQIIAAAKAAHAMEFIEPLENGLDTVIGENGASLSGGQRQRLAIARALLRDSPVLILDEATSALDTESERAIQAALEELQKDRTVLVIAHRLSTIEKADEILVIDHGEICERGS 564
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB23B_ARATH (ABC transporter B family member 23, mitochondrial OS=Arabidopsis thaliana GN=ABCB23 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24 Identity = 67/218 (30.73%), Postives = 111/218 (50.92%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++ Y P +L GIS P K IVG +GSGKST+++ +FR + + R+ + ++PQD V+F T+ N+ T+E++++A + + D + K K + V E G S G++Q V L R LK IL+ DEAT ++D+ T+ I ++ R S+ T I IAHR+T+ + D ++++ G + E Sbjct: 435 GSISFENVHFSYLPERK-ILDGISFEVPAGKSVAIVGSSGSGKSTILRMIFRFFDTDSGNVRIDGQDIKEVTLESLRSCIGVVPQDTVLFNDTIFHNIHYGNLSATEEEVYDAARRAVIHDTIMKFPDKYSTAVGERGLMLSGGEKQRVALARAFLKSPAILLCDEATNALDSKTEAEIMKTFRSLASNRTCIFIAHRLTTAMQCDEIIVMEKGKVVE 651
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB12B_ARATH (ABC transporter B family member 12 OS=Arabidopsis thaliana GN=ABCB12 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24 Identity = 65/223 (29.15%), Postives = 119/223 (53.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPF--VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G I+L+D+ Y P P + G S P +VG +GSGKST+I + R +P A R+++ ++ Q+PV+F ++ N+ E T ++I A + + LD+KV E+G S GQ+Q + + R +LK ++L+LDEAT+++DT ++ ++Q++L + + T + +AHR+++V ++DM+ ++ G + E S Sbjct: 366 GDIELKDVHFSY-PARPDEEIFDGFSLFIPSGATAALVGESGSGKSTVINLIERFYDPKAGEVLIDGINLKEFQLKWIRSKIGLVCQEPVLFSSSIMENIAYGKENATLQEIKVATELANAAKFINNLPQGLDTKVGEHGTQLSGGQKQRIAIARAILKDPRVLLLDEATSALDTESERVVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHSGKMVEKGS 587 HSP 2 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 66/223 (29.60%), Postives = 117/223 (52.47%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV----DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+LR L Y P P + R + T K +VG +GSGKST+I L R +P + R ++ ++ Q+PV+F T+R+N+ E T+ +I A + + + D+ V E G S GQ+Q V + R ++K KIL+LDEAT+++D ++ L+Q +L + + T + +AHR++++ ++D++ ++ +G+I E Sbjct: 1025 GDIELRHLSFTY-PARPGIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGQITLDGVELKKLQLKWLRQQMGLVGQEPVLFNDTIRANIAYGKGSEEAATESEIIAAAELANAHKFISSIQQGYDTVVGEKGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERLVQDALDRVIVNRTTVVVAHRLSTIKNADVIAIVKNGVIAE 1246
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_FRATT (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. tularensis GN=msbA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 62/219 (28.31%), Postives = 114/219 (52.05%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G + ++DL + H VL G+S + VG++GSGK+TL + R R+ LSI+ Q+ +F+ TV +N+ E ++E++ +AL + + V++ +++ + NG S GQRQ + + R LLK +L+ DEAT+++D ++ ++QQ+L CT I IAHR+++V ++D ++++ G + E Sbjct: 370 GNVTIKDLSFAFGEHK--VLSGVSVDIKAGQTVAFVGKSGSGKTTLTSIISRFYTQHEGEILLDGVDTRELTLENLRSHLSIVSQNVHLFDDTVYNNIAFGLSREVSEEEVIDALKRANAYEFVQELSDGINTNIGNNGSKLSGGQRQRISIARALLKNAPVLIFDEATSALDNESERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGRVVE 586
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_FRAT1 (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=msbA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 62/219 (28.31%), Postives = 114/219 (52.05%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G + ++DL + H VL G+S + VG++GSGK+TL + R R+ LSI+ Q+ +F+ TV +N+ E ++E++ +AL + + V++ +++ + NG S GQRQ + + R LLK +L+ DEAT+++D ++ ++QQ+L CT I IAHR+++V ++D ++++ G + E Sbjct: 370 GNVTIKDLSFAFGEHK--VLSGVSVDIKAGQTVAFVGKSGSGKTTLTSIISRFYTQHEGEILLDGVDTRELTLENLRSHLSIVSQNVHLFDDTVYNNIAFGLSREVSEEEVIDALKRANAYEFVQELSDGINTNIGNNGSKLSGGQRQRISIARALLKNAPVLIFDEATSALDNESERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGRVVE 586
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_CHAGB (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Chaetomium globosum GN=ATM1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 67/237 (28.27%), Postives = 121/237 (51.05%), Query Frame = 1 Query: 4 KSRPNHS---WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSD--CTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 K +PN + P G+I ++ Y P P +L +S T P KK +VG +G GKSTL++ LFR +P + R + ++PQD +F TV N+ + + E++ EA + + D++ +KV E G S G++Q + + R++LK +L DEAT+++DT T+ + ++ + + T + +AHR+ ++ D+D++++L G + E S Sbjct: 329 KEKPNAASLVLPKGGEIRFDNVSFGYYPDRP-ILNNLSVTIPAGKKVAVVGPSGCGKSTLLRLLFRSYDPQSGRIFIDDQDIRDVSLDSLRRSIGVVPQDTPLFNDTVELNIRYGNLDASREKVLEAARRAHIHDKIESWPHGYQTKVGERGLMISGGEKQRLAVSRLILKDPPLLFFDEATSALDTHTEQALMSNINEVLKEKRRTSVFVAHRLRTIYDADVIIVLKEGRVVEMGS 564
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCBA_HUMAN (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 65/224 (29.02%), Postives = 117/224 (52.23%), Query Frame = 1 Query: 37 GKIDLRDLQVRYA--PHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV----DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690 G ++ +++ Y P +P + + S + P T +VG +GSGKST++ L R+ +PA+ R+++ + Q+P++F ++ N+ D T E+I + +R ++ V E G S GQ+Q + + R LLK KIL+LDEAT+++D + L+Q++L + TV+ IAHR++++ +++MV +L G I EY Sbjct: 490 GALEFKNVHFAYPARPEVP-IFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEY 712
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y492_RICBR (Putative export ATP-binding/permease protein RBE_0492 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0492 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24 Identity = 63/198 (31.82%), Postives = 107/198 (54.04%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIE 684 +L IS + GIVGR+GSGKSTL+Q L R + R ++ +PQ+ +F GT++SN+ + ++E+I E + + D K +++K+ E G S GQ+Q + L R LL++ +IL+LDEA ++D+ ++ + S+R VI+IAHRI+S+ +D +L++ G +E Sbjct: 353 ILNNISFKIDSTQFIGIVGRSGSGKSTLMQLLLRFYVQESGIILVNNQDIALLNPNEIRKLIAYVPQEASIFSGTIKSNIMFGNDSSEEEITEIIKITGIADFTDKIPDGINAKIGEKGVRLSGGQKQRIALARALLRKPQILLLDEAMNALDSQSEQKLLSSIRDIMKGKIVISIAHRISSIESADNILIIDKGAVE 550 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |