FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_XANCP (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. campestris GN=msbA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 67/219 (30.59%), Postives = 110/219 (50.23%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+ RD+ RY L +S T IVGR+GSGKS+LI+ + R E + R +++++ Q ++F+G++ NV + + Q+ A+ + V + L S V G S GQRQ + + R +LK IL+LDEATA++D ++ L+Q +L + D T + IAHR++++ +D VL++ G I E Sbjct: 344 GLIEFRDVTARYPGQANPALADVSFVAQPGTVTAIVGRSGSGKSSLIKLIPRFYEAESGQILLDGHPVQAYALADLRRQIALVGQQVMLFDGSIAENVAYGEMRQCDAGQLERAIQGANAMEFVAQLPEGLQSHVGTKGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVE 562
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_XANC8 (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. campestris (strain 8004) GN=msbA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 67/219 (30.59%), Postives = 110/219 (50.23%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+ RD+ RY L +S T IVGR+GSGKS+LI+ + R E + R +++++ Q ++F+G++ NV + + Q+ A+ + V + L S V G S GQRQ + + R +LK IL+LDEATA++D ++ L+Q +L + D T + IAHR++++ +D VL++ G I E Sbjct: 344 GLIEFRDVTARYPGQANPALADVSFVAQPGTVTAIVGRSGSGKSSLIKLIPRFYEAESGQILLDGHPVQAYALADLRRQIALVGQQVMLFDGSIAENVAYGEMRQCDAGQLERAIQGANAMEFVAQLPEGLQSHVGTKGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVE 562
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_ASPFU (Iron-sulfur clusters transporter atm1, mitochondrial OS=Aspergillus fumigatus GN=atm1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 63/223 (28.25%), Postives = 114/223 (51.12%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSD--CTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G+I ++ Y P P +L+ S T P +K IVG +G GKST+++ LFR + R + ++PQD +F T+ N+ + TDE++ +A + ++ ++K + V E G S G++Q + + R++LK ++L DEAT+++DT T+ + Q++ + T + +AHR+ ++ DSD +L+L G + E S Sbjct: 454 GEIRFENVTFGYHPDRP-ILKNASFTIPAGQKFAIVGPSGCGKSTILRLLFRFYDVQEGRILIDDQDVRDVSLESLRKAIGVVPQDTPLFNDTIAHNIRYGRIDATDEEVHKAAQRARIDALIQKLPEGYQTAVGERGMMISGGEKQRLAISRLILKDPELLFFDEATSALDTYTEQALLQNINSILKEKKRTSVFVAHRLRTIYDSDQILVLKDGRVAEMGS 675
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB10B_ARATH (ABC transporter B family member 10 OS=Arabidopsis thaliana GN=ABCB10 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 64/223 (28.70%), Postives = 112/223 (50.22%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDE-QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G I+L+ + Y P P V + P K +VG++GSGKS+++ + R +P A R + ++ Q+P +F T+ N+ +E E ++ EA + +KV E G S GQRQ + + R +LK +IL+LDEAT+++D ++ ++QQ+L + D T + +AHR++++ +SDM+ ++ G I E S Sbjct: 980 GTIELKGVHFSY-PSRPDVTIFSDFNLLVPSGKSMALVGQSGSGKSSVLSLVLRFYDPTAGIIMIDGQDIKKLKLKSLRRHIGLVQQEPALFATTIYENILYGKEGASESEVMEAAKLANAHSFISSLPEGYSTKVGERGIQMSGGQRQRIAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMRDRTTVVVAHRLSTIKNSDMISVIQDGKIIEQGS 1201 HSP 2 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 62/224 (27.68%), Postives = 114/224 (50.89%), Query Frame = 1 Query: 34 HGKIDLRDLQVRYAPHMPFVL--RGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 +G I +D+ Y P P V+ ++ P K +VG +GSGKST+I + R EP R + ++ Q+PV+F T+R N+ ++ T E+I A + + +++V E G S GQ+Q + + R ++K IL+LDEAT+++D ++ ++Q++L + T + +AHR+++V ++D++ ++ G I E S Sbjct: 358 NGDILFKDVTFTY-PSRPDVVIFDKLNFVIPAGKVVALVGGSGSGKSTMISLIERFYEPTDGAVMLDGNDIRYLDLKWLRGHIGLVNQEPVLFATTIRENIMYGKDDATSEEITNAAKLSEAISFINNLPEGFETQVGERGIQLSGGQKQRISISRAIVKNPSILLLDEATSALDAESEKIVQEALDRVMVGRTTVVVAHRLSTVRNADIIAVVGGGKIIESGS 580
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_CHRSD (Lipid A export ATP-binding/permease protein msbA OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=msbA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 63/218 (28.90%), Postives = 107/218 (49.08%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDE-VRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G++ ++ RY VL+GI P + IVGR+GSGKSTL+ + R P R R++++ Q +F T+ +N+ D + E+ + E + + D+ V +NG S GQRQ + + R + K +L+LDEAT+++DT ++ IQQ+L + T IAHR++++ +D +L++ G I E Sbjct: 336 GRVRFEGVRFRYGEDQAEVLKGIDLDVPQGEMIAIVGRSGSGKSTLVSLMPRFYRPTEGRVLLDDVDIQEYALSPLRQRIALVSQQVTLFNTTIAANIAYGHPDADREAVESAARSAYAHEFIERLPNGYDTVVGDNGVMLSGGQRQRLAIARAIFKDAPLLVLDEATSALDTESERYIQQALERVCRGRTTFVIAHRLSTIERADRILVMEQGEIIE 553
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_ALCBS (Lipid A export ATP-binding/permease protein msbA OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=msbA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 65/222 (29.28%), Postives = 113/222 (50.90%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G ID + Y P P V+R ++ + +VGR+G+GKST+ L R +P R +++++ Q V+F +VR+N+ L D I +A + + E LD+ + ++G S GQRQ + + R LLK +L+LDEAT+++D+ +++ IQQ+L Q T + IAHR++++ +D +++L G + E S Sbjct: 340 GNIDFEGVSFGYDPASP-VVRQLNFAIKAGETVALVGRSGAGKSTISAMLPRFFDPDQGRILLDGIPLQEYQLSELRNQIAMVSQRVVLFNDSVRNNIAYGELRSSDDASIIKAAKDAHAWSFIEQLEHGLDTLLGQDGVQLSGGQRQRIAIARALLKDAPVLILDEATSALDSESEHHIQQALEQVMQGRTTLVIAHRLSTIEKADRIMVLDQGQLIEQGS 560
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_ASPOR (Iron-sulfur clusters transporter atm1, mitochondrial OS=Aspergillus oryzae GN=atm1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 63/223 (28.25%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSD--CTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G+I ++ Y P P +L+ S T P +K IVG +G GKST+++ LFR + R + ++PQD +F ++ N+ + TDE++ +A + + + + K + V E G S G++Q + + R++LK ++L DEAT+++DT T+ + Q++ D T + +AHR+ ++ DSD +L+L G + E S Sbjct: 450 GEIKFENVTFGYHPDRP-ILKNASFTIPAGQKFAIVGPSGCGKSTILRLLFRYYDVQEGRILVDGQDVRDVTLESLRKAIGVVPQDTPLFNDSIAHNIRYGRIDATDEEVRKAAQRAHIHELIEKLPEGYKTAVGERGMMISGGEKQRLAISRLILKDPELLFFDEATSALDTYTEQALLQNINSVLKDKARTSVFVAHRLRTICDSDQILVLKEGRVAETGS 671
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB28B_ARATH (ABC transporter B family member 28 OS=Arabidopsis thaliana GN=ABCB28 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 73/222 (32.88%), Postives = 110/222 (49.55%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD---PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G + L D+ Y P P V L G+S T T +VG +G+GKST++Q L R EP +SI+ Q+PV+F +V N+ P E + + I +A D + D+ V E G S GQRQ V + R LLK IL+LDEAT+++D ++ L+Q +L + D T + IAHR+++V ++ + + S G I E Sbjct: 468 GDVCLDDVHFAY-PLRPDVKVLDGLSLTLNSGTVTALVGSSGAGKSTIVQLLARFYEPTQGRITVGGEDVRMFDKSEWAKVVSIVNQEPVLFSLSVAENIAYGLPNEHVSKDDIIKAAKAANAHDFIISLPQGYDTLVGERGGLLSGGQRQRVAIARSLLKNAPILILDEATSALDAVSERLVQSALNRLMKDRTTLVIAHRLSTVQSANQIAVCSDGKIIE 688
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_XANC5 (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=msbA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 67/219 (30.59%), Postives = 110/219 (50.23%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+ RD+ RY + L +S T IVGR+GSGKS+LI+ + R E A R +++++ Q ++F+G++ NV + Q+ A+ + V + L S V G S GQRQ + + R +LK +L+LDEATA++D ++ L+Q +L + D T + IAHR++++ +D VL++ G I E Sbjct: 344 GLIEFRDVTARYPGQVNPALADVSFVAQPGTVTAIVGRSGSGKSSLIKLIPRFYEAEAGQILLDGHPVQAYALADLRRQIALVGQQVMLFDGSIADNVAFGEMRNADAGQLERAILGANAMEFVAQLPEGLQSHVGTKGGRLSGGQRQRLAIARAMLKDAPVLILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVE 562
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_XANOR (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae GN=msbA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 67/219 (30.59%), Postives = 110/219 (50.23%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+ RD+ RY + L +S T IVGR+GSGKS+LI+ + R + A R +++++ Q ++F+G++ NV + Q+ A+ + V + L S V G S GQRQ + + R +LK IL+LDEATA++D ++ L+Q +L + D T + IAHR++++ +D VL++ G I E Sbjct: 344 GLIEFRDVTARYPGQVNPALADVSFIAQPGTVTAIVGRSGSGKSSLIKLIPRFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSIAENVAFGEMRSADASQLERAILGANAMEFVAQLPEGLQSHVGAKGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVE 562 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |