FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LKTB_PASSP (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica-like sp. (strain 5943B) GN=lktB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 64/218 (29.36%), Postives = 112/218 (51.38%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEE-YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++++ RY P P +L ++ + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ E + E++ A D + ++ V E G S GQRQ + + R L+ KIL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 467 GDIAFKNIRFRYKPDAPTILNNVNLEIKKGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSEPGMSMERVIYAAKLAGAHDFISDVREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVE 684
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LKTB7_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++++ RY P P +L ++ + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ DP E++ A D + + ++ V E G S GQRQ + + R L+ KIL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 467 GDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDP--GMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVE 684
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LKB2A_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++++ RY P P +L ++ + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ DP E++ A D + + ++ V E G S GQRQ + + R L+ KIL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 467 GDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDP--GMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVE 684
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LKB1B_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++++ RY P P +L ++ + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ DP E++ A D + + ++ V E G S GQRQ + + R L+ KIL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 467 GDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDP--GMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVE 684
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LKB1A_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++++ RY P P +L ++ + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ DP E++ A D + + ++ V E G S GQRQ + + R L+ KIL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 467 GDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDP--GMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVE 684
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LKB16_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++++ RY P P +L ++ + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ DP E++ A D + + ++ V E G S GQRQ + + R L+ KIL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 467 GDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDP--GMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYQSEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVE 684
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LKB14_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++++ RY P P +L ++ + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ DP E++ A D + + ++ V E G S GQRQ + + R L+ KIL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 467 GDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDP--GMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVE 684
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LKB13_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I ++++ RY P P +L ++ + GIVGR+GSGKSTL + L R P R ++ ++ QD V+ ++R N+ DP E++ A D + + ++ V E G S GQRQ + + R L+ KIL+ DEAT+++D ++++I Q++++ TVI IAHR+++V ++D ++++ G I E Sbjct: 467 GDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDP--GMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVE 684
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ATM1_USTMA (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Ustilago maydis GN=ATM1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/222 (29.28%), Postives = 110/222 (49.55%), Query Frame = 1 Query: 31 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 S G+I ++ Y P P + R IS T P KT VG +G GKST+ + LFR EP + R + ++PQD +F +R N+ + +DE + +A ++ V +KV E G S G++Q + + R+LLK +L DEAT+++D+ T+ + +++ T I +AHR+ ++ DSD +++L G ++E Sbjct: 493 SGGEIRFENVTFGYHPDRP-IFRNISFTVPAGYKTAFVGPSGCGKSTIFRLLFRFYEPQSGKIYIDGQDITKVSLESLRRHIGVVPQDTPLFNDDIRHNIRYGRLDASDEDVEKAARAAKVDQIVLNLPEGYSTKVGERGLMISGGEKQRLAVARLLLKNPSVLFFDEATSALDSYTETELMRNIHATLLADKKTAIFVAHRLRTISDSDFIIVLQGGGVKE 713
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1073_RICCN (Putative export ATP-binding/permease protein RC1073 OS=Rickettsia conorii GN=RC1073 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 58/196 (29.59%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHG 675 ++ +S K GIVGR+G+GKST+IQ L R R ++ +PQ+ +F GT++SN+ E +D++I E + + + K +++K+ E G S GQ+Q + + R LL+ +IL+LDEA +++DT ++ + +S+++ +I+IAHRI+S+ +D +L++ G Sbjct: 353 IINNMSLKINANKFLGIVGRSGAGKSTVIQLLLRFYRQENGTILINNQDITLLNPAEIRKLIAYVPQEASIFSGTIKSNIIFGNNEASDDEINEIIKITGIEEFAAKLHDGINAKIGERGVRLSGGQKQRIAIARALLRMPQILLLDEAMSALDTMSEQKLLESIKKIMRGNIIISIAHRISSIESADYILVIDKG 548 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |