FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDL2_YEAST (ATP-dependent permease MDL2, mitochondrial OS=Saccharomyces cerevisiae GN=MDL2 PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 62/221 (28.05%), Postives = 105/221 (47.51%), Query Frame = 1 Query: 28 PSHGKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTD--EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ--HFSDCTVITIAHRITSVIDSDMVLLLSH 672 P G I+ +D+ Y P P V + ++ IVG +G GKST+ L R P R + I+ Q+PV+ GT+R N+ YT E+I +C + + K D+ + +G S GQ+Q + + R L+K+ IL+LDEAT+++D ++ I + Q T+++IAHR++++ S+ V++L H Sbjct: 441 PDRGVIEFKDVSFSY-PTRPSVQIFKNLNFKIAPGSSVCIVGPSGRGKSTIALLLLRYYNPTTGTITIDNQDISKLNCKSLRRHIGIVQQEPVLMSGTIRDNITYGLTYTPTKEEIRSVAKQCFCHNFITKFPNTYDTVIGPHGTLLSGGQKQRIAIARALIKKPTILILDEATSALDVESEGAINYTFGQLMKSKSMTIVSIAHRLSTIRRSENVIVLGH 660
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LCNC_LACLA (Lactococcin-A transport/processing ATP-binding protein lcnC OS=Lactococcus lactis subsp. lactis GN=lcnC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 62/224 (27.68%), Postives = 115/224 (51.34%), Query Frame = 1 Query: 31 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 SH +++ D+ +Y VL I + +K IVG +GSGKSTL++ L +P + R ++ +PQ P +F G++ N+ E + E+I +A++ ++ ++ + + ++++ + + S GQ+Q + L R LL KIL+LDEAT+++D T+ I ++L D T+I IAHR++ S ++++ G + E S Sbjct: 478 SHFNLNMSDISYQYGFGRK-VLSEIELSIKENEKLTIVGMSGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINYLPQQPYIFTGSILDNLLLGANENASQEEILKAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKILILDEATSNLDMITEKKILKNLLP--LDKTIIFIAHRLSVAEMSHRIIVVDQGKVIESGS 698
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: COMA_STRPN (Transport/processing ATP-binding protein comA OS=Streptococcus pneumoniae GN=comA PE=3 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 62/201 (30.85%), Postives = 100/201 (49.75%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 VL I+ T P K VG +GSGK+TL + + +P+ R ++ + Q P +F GT+ N+ E T E I A++ ++ +++ + +++T +G S GQRQ + L R LL +L+LDEAT+S+D T+ I +L D T+I IAHR+T ++ V++L G I E Sbjct: 499 VLSDINLTVPQGSKVAFVGISGSGKTTLAKMMVNFYDPSQGEISLGSVNLNQIDKKALRQYINYLSQQPYVFNGTILENLLLGAKEGTTQEDILRAVELAEIREDIERMPLNYQTELTSDGAGISGGQRQRIALARALLTDAPVLILDEATSSLDILTEKRIVDNLIA--LDKTLIFIAHRLTIAERTEKVVVLDQGKIVE 697
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB8_RAT (ATP-binding cassette sub-family B member 8, mitochondrial OS=Rattus norvegicus GN=Abcb8 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 59/220 (26.82%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPF-VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTR-LSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I +++ Y F VL+ + P K +VG++G GK+T+ L R +P A R + + I Q+PV+F T+ N+ + + +DE+++ A K + + + V E G S GQ+Q + + R L+KR +L+LDEAT+++D ++ ++Q++L + + TV+ IAHR+++V + ++++++G + E Sbjct: 452 GSITFQNVSFSYPCRPGFNVLKNFTLKLPPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVTLDGHDLRTLDPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAARKANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKRPTVLILDEATSALDAESERIVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCE 671
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPB (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisB18) GN=ndvA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 63/231 (27.27%), Postives = 110/231 (47.62%), Query Frame = 1 Query: 4 KSRPNHSWPSH--GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 + RP+ P G ++ +D+ Y P V PGE +VG TG+GKST I L R +P + R + ++ Q+ ++F ++ N+ + + T+E++ A + Q D + + E K D+ E G S G+RQ + + R LLK IL+LDEAT+++D T+ + +L + T IAHR++++ + +L+ G + E Sbjct: 330 RDRPDAVDPERLQGLVEFKDVSFSYDGKRPAVADLSFTARPGET-IALVGATGAGKSTAIALLHRAFDPQSGVIRIDGLDVRDLTLAGLRRNIGVVFQEALLFNRSIADNLRVGKPDATEEEMRTAASRAQALDFIERSEQKFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFEAGRVIE 559
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_RHIRD (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium radiobacter GN=ndvA PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 63/218 (28.90%), Postives = 107/218 (49.08%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G ++ R++ +A V +S T + IVG TG+GK+TLI L R+ +P + R ++ + QD + ++R N+ E TD ++ EA D + + ++V E G S G+RQ + + R +LK IL+LDEAT+++D T+ ++ ++ + T IAHR+++V D+D+VL L G I E Sbjct: 333 GTVEFRNINFGFANTKQGV-HDVSFTAKAGETVAIVGPTGAGKTTLINLLQRVYDPDSGQILIDGTDISTVTKNSLRNSIATVFQDAGLLNRSIRENIRLGRETATDAEVVEAAAAAAATDFIDSRINGYLTQVGERGNRLSGGERQRIAIARAILKNAPILVLDEATSALDVETEARVKAAVDALRKNRTTFIIAHRLSTVRDADLVLFLDQGRIIE 549
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_AGRT5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndvA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 63/218 (28.90%), Postives = 107/218 (49.08%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G ++ R++ +A V +S T + IVG TG+GK+TLI L R+ +P + R ++ + QD + ++R N+ E TD ++ EA D + + ++V E G S G+RQ + + R +LK IL+LDEAT+++D T+ ++ ++ + T IAHR+++V D+D+VL L G I E Sbjct: 333 GTVEFRNINFGFANTKQGV-HDVSFTAKAGETVAIVGPTGAGKTTLINLLQRVYDPDSGQILIDGTDISTVTKNSLRNSIATVFQDAGLLNRSIRENIRLGRETATDAEVVEAAAAAAATDFIDSRINGYLTQVGERGNRLSGGERQRIAIARAILKNAPILVLDEATSALDVETEARVKAAVDALRKNRTTFIIAHRLSTVRDADLVLFLDQGRIIE 549
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_BLOPB (Lipid A export ATP-binding/permease protein msbA OS=Blochmannia pennsylvanicus (strain BPEN) GN=msbA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 63/219 (28.77%), Postives = 111/219 (50.68%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEE--YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I D+ Y L I+ + K +VGR+GSGKST++ L R + R +++++ Q+ +F T+ +N+ Y+ E I A D + + + LD+ + ENG S GQRQ + + R LL+ IL+ DEAT+++D+A++++I +SL + T + IAHR+++V ++D +L++ +G I E Sbjct: 342 GHIIFDDVTFFYPEKNTPSLYKINFSIESGKTVALVGRSGSGKSTIVNLLTRFYDIDKGRILLDGFNLNDYKLASLRNQIAMVSQNVHLFNDTIANNIAYARRNFYSRESIETAARMACAMDFISQMKNGLDTIIGENGILLSSGQRQRIAIARALLRDCPILIFDEATSALDSASEHIIHKSLDTLKKNRTSLIIAHRLSTVENADEILVIENGYIME 560
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: YGAD_BACSU (Putative multidrug export ATP-binding/permease protein ygaD OS=Bacillus subtilis GN=ygaD PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 54/218 (24.77%), Postives = 109/218 (50.00%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G ++ +++ +Y +L +S + +VG +G GKSTL+ + R + + R ++ ++ QD +F T+R N+ + T E+I EA + + +++V E G S GQ+Q + + RV LK +L+LDEAT+++D +++ IQ+++ + D T +AHR++++ +D ++++ +G I E Sbjct: 339 GGVEFQNVSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIE 556
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_RHIME (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium meliloti GN=ndvA PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 59/218 (27.06%), Postives = 107/218 (49.08%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G+++ RD+ +A V R +S + IVG TG+GK+TL+ L R+ EP R ++ + QD + ++ N+ E+ + +++ A + D + + D+ V E G S G+RQ V + R +LK IL+LDEAT+++D T+ ++ ++ D T IAHR+++V ++D+V+ + G + E Sbjct: 333 GEVEFRDISFDFANSAQGV-RNVSFKAKAGQTIAIVGPTGAGKTTLVNLLQRVHEPKHGQILIDGVDIATVTRKSLRRSIATVFQDAGLMNRSIGENIRLGREDASLDEVMAAAEAAAASDFIEDRLNGYDTVVGERGNRLSGGERQRVAIARAILKNAPILVLDEATSALDVETEARVKDAIDALRKDRTTFIIAHRLSTVREADLVIFMDQGRVVE 549 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |