FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPL (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Lens) GN=msbA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18 Identity = 56/203 (27.59%), Postives = 104/203 (51.23%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 +L ++ +VG +GSGK+T+ L R E + R ++S++ Q+ +F T+ +N+ + + EQI A + +++ D++V ENG S GQRQ + + R +LK IL+LDEAT+++D+ +++ IQ +L Q + T + IAHR++++ + ++++ HG I E S Sbjct: 357 ILHDVNFVIEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSLVSQNVTLFNDTLANNIAYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMNGRTTLIIAHRLSTIKHAHKIIVMQHGRIVEQGS 559
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CYDC_HAEIN (ATP-binding/permease protein cydC OS=Haemophilus influenzae GN=cydC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18 Identity = 65/221 (29.41%), Postives = 113/221 (51.13%), Query Frame = 1 Query: 43 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD--PLEEYTDEQIWEALDKCQLGDEVRKKEGK-LDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHG-LIEEYD 693 I ++L Y VL+ ++ KK I+G+TGSGKS+L+Q L R + R ++ + Q +F T+R N+ ++ +DEQ+ E L + L ++ ++EGK L+ + + G S G+++ + L R+LL IL+LDE T +D T+ I + + QH + T+I + HR++S+ D + ++ +G LIEE D Sbjct: 338 ISAKNLNFSYPEQETLVLKNLTLDLEQGKKIAILGKTGSGKSSLLQLLVRNYDANQGELLLAEKPISAYSEETLRHQICFLTQRVHVFSDTLRQNLQFASADKISDEQMIEMLHQVGLS-KLLEQEGKGLNLWLGDGGRPLSGGEQRRLGLARILLNNASILLLDEPTEGLDRETERQILRLILQHAENKTLIIVTHRLSSIEQFDKICVIDNGRLIEEGD 557
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_BRUAB (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Brucella abortus GN=ndvA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 61/194 (31.44%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 118 PGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDP-LEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 PG+ IVG TG+GK+TLI L R+ +PAA R ++ + QD +F +V N+ T E++ A D + K D+ V E G S G+RQ + + R +LK IL+LDEAT+++D T+ + Q++ + + T IAHR+++V +D+VL + G + E S Sbjct: 360 PGQT-VAIVGPTGAGKTTLINLLQRVFDPAAGRIMIDGTDTRTVSRRSLRHAIATVFQDAGLFNRSVEDNIRVGRANATHEEVHAAAKAAAAHDFILAKSEGYDTFVGERGSQLSGGERQRLAIARAILKDSPILVLDEATSALDVETEEKVTQAVDELSHNRTTFIIAHRLSTVRSADLVLFMDKGHLVESGS 552
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_BRUA2 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Brucella abortus (strain 2308) GN=ndvA PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 61/194 (31.44%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 118 PGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDP-LEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 PG+ IVG TG+GK+TLI L R+ +PAA R ++ + QD +F +V N+ T E++ A D + K D+ V E G S G+RQ + + R +LK IL+LDEAT+++D T+ + Q++ + + T IAHR+++V +D+VL + G + E S Sbjct: 360 PGQT-VAIVGPTGAGKTTLINLLQRVFDPAAGRIMIDGTDTRTVSRRSLRHAIATVFQDAGLFNRSVEDNIRVGRANATHEEVHAAAKAAAAHDFILAKSEGYDTFVGERGSQLSGGERQRLAIARAILKDSPILVLDEATSALDVETEEKVTQAVDELSHNRTTFIIAHRLSTVRSADLVLFMDKGHLVESGS 552
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_IDILO (Lipid A export ATP-binding/permease protein msbA OS=Idiomarina loihiensis GN=msbA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 63/219 (28.77%), Postives = 107/219 (48.86%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I D+ Y L I+ K +VGR+GSGKST+ L R + R + +++ Q +F T+ +N+ ++ + E I +A ++ + + LD+ V ENG S GQRQ + + R LL+ IL+LDEAT+++DT ++ IQ +L + T I IAHR++++ ++D +L++ +G I E Sbjct: 338 GDIVFDDVTFSYQKDDEPALEHINFKVDQGKTVALVGRSGSGKSTISNLLTRFYDVEQGSILLDGHNINDYKLKCLRRQFALVSQHVTLFNDTIANNIAYGASKDVSRENIIKAAEQAYVTEFTDSMPKGLDTMVGENGVMLSGGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIVIAHRLSTIENADEILVMDNGEIIE 556
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_BLOFL (Lipid A export ATP-binding/permease protein msbA OS=Blochmannia floridanus GN=msbA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 60/200 (30.00%), Postives = 101/200 (50.50%), Query Frame = 1 Query: 94 LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEE--YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 L I+ K +VGR+GSGKST++ L R + R ++S++ Q+ +F T+ +N+ Y+ I EA + K + D+ V ENG S GQRQ + + R LL+ IL+LDEAT+S+DT ++ +I +S+ + T + IAHR++++ ++D +L++ G I E Sbjct: 361 LCNINFNIESGKTIALVGRSGSGKSTIVNLLTRFYDVYQGRILLDGLNLNDYTLTSLREQVSVVTQNVYLFNDTIANNIAYARTRFYSRASIEEAAKMAYAMGFISKMKNGFDTIVGENGILLSNGQRQRIAIARALLRNCPILILDEATSSLDTESECIIYKSINILKKNRTSLIIAHRLSTIENADEILVVERGSIVE 560
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LCNCL_LACLA (Lactococcin transport/processing ATP-binding protein lcnC-like OS=Lactococcus lactis subsp. lactis GN=lcnC PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 61/224 (27.23%), Postives = 114/224 (50.89%), Query Frame = 1 Query: 31 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 SH +++ ++ +Y VL I + +K IVG +GSGKSTL++ L +P + R ++ +PQ P +F G++ N+ E + E+I A++ ++ ++ + + ++++ + + S GQ+Q + L R LL KIL+LDEAT+++D T+ I ++L D T+I IAHR++ S ++++ G + E S Sbjct: 478 SHFNLNMSEISYQYGFGRK-VLSEIKLSIKENEKLTIVGISGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINYLPQQPYIFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKILILDEATSNLDMITEKKILKNLLA--LDKTIIFIAHRLSVAEMSHRIIVIEQGKVIESGS 698
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB9_HUMAN (ATP-binding cassette sub-family B member 9 OS=Homo sapiens GN=ABCB9 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.431e-18 Identity = 60/223 (26.91%), Postives = 109/223 (48.88%), Query Frame = 1 Query: 28 PSH--GKIDLRDLQVRYA--PHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 P H G++D ++ Y PH VL+ +S + K T +VG +GSGKS+ + L +S++ Q+PV+F ++ N+ L E + EA K + + + ++ E G S GQ+Q V + R L++ +L+LDEAT+++D ++ LIQQ++ + TV+ IAHR+++V + ++++L G + Sbjct: 497 PDHLEGRVDFENVTFTYRTRPHTQ-VLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRLSTVEHAHLIVVLDKGRV 718
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MESD_LEUME (Mesentericin-Y105 transport/processing ATP-binding protein mesD OS=Leuconostoc mesenteroides GN=mesD PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 57/197 (28.93%), Postives = 102/197 (51.78%), Query Frame = 1 Query: 103 ISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 +S T +K +VG +GSGKSTL++ L +P + R ++ +PQ+P +F G++ N+ T E I A++ ++ D++ K +++ E+G N S GQ+Q + L R +L +L+LDE+T+++D T+ I +L + ++ T+I +AHR+T D +L + G I E Sbjct: 508 VSLTITAGEKIALVGISGSGKSTLVKLLVNFFQPESGTISLGPTPLANLDKHELRGHINYLPQEPFIFSGSIMENLLLGAKPGTTQEDIIRAVEIAEIKDDIEKMSQGFGTELAESG-NISGGQKQRIALARAILVDSPVLILDESTSNLDVLTEKKIIDNLMK-LTEKTIIFVAHRLTISQRVDRILTMQSGKIIE 702
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1383_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1383 OS=Mycobacterium bovis GN=Mb1383 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 63/207 (30.43%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 70 YAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 Y P +P V++ +S T T +VG +GSGKSTL L R + TR+ + Q+ + GT N+ + + EQ+ A + Q+ D V + D+ + N S G+RQ + + R +L +L+LDEATA D ++ L+QQ+L + D TV+ IAHR+ ++ +D +++L HG I E Sbjct: 619 YRPGVP-VIQDVSLTLRPGTVTALVGPSGSGKSTLATLLARFHDVERGAIRVGGQDIRSLAADELYTRVGFVLQEAQLVHGTAAENIALAVPDAPAEQVQVAAREAQIHDRVLRLPDGYDTVLGANS-GLSGGERQRLTIARAILGDTPVLILDEATAFADPESEYLVQQALNRLTRDRTVLVIAHRLHTITRADQIVVLDHGRIVE 823 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |