FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y1348_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1348/MT1390 OS=Mycobacterium tuberculosis GN=Rv1348 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 63/207 (30.43%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 70 YAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 Y P +P V++ +S T T +VG +GSGKSTL L R + TR+ + Q+ + GT N+ + + EQ+ A + Q+ D V + D+ + N S G+RQ + + R +L +L+LDEATA D ++ L+QQ+L + D TV+ IAHR+ ++ +D +++L HG I E Sbjct: 619 YRPGVP-VIQDVSLTLRPGTVTALVGPSGSGKSTLATLLARFHDVERGAIRVGGQDIRSLAADELYTRVGFVLQEAQLVHGTAAENIALAVPDAPAEQVQVAAREAQIHDRVLRLPDGYDTVLGANS-GLSGGERQRLTIARAILGDTPVLILDEATAFADPESEYLVQQALNRLTRDRTVLVIAHRLHTITRADQIVVLDHGRIVE 823
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_ACIAD (Lipid A export ATP-binding/permease protein msbA OS=Acinetobacter sp. (strain ADP1) GN=msbA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 57/192 (29.69%), Postives = 99/192 (51.56%), Query Frame = 1 Query: 118 PGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 PGE IVGR+G+GK++L+ L R E + R +++++ Q V+F +VR N+ LE + I A D + D+ + G N S GQRQ + + R +LK IL+LDEAT+++D +++ IQ++ + + T I IAHR++++ ++D ++++ G I E Sbjct: 360 PGET-VAIVGRSGAGKTSLVNLLVRFQEVTSGSLYLDHIPIQDIELSCLRQQVAMVNQQVVLFNRSVRENIAYGQLEGAAEADIVAAAKAAYAHDFIMNLPQGYDTILGAQGLNLSGGQRQRIAIARAILKNAPILILDEATSALDNESEHFIQKAFDEAMQNRTTIVIAHRLSTIENADRIVVMDKGQIIE 550
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: LAGD_LACLA (Lactococcin-G-processing and transport ATP-binding protein lagD OS=Lactococcus lactis subsp. lactis GN=lagD PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 62/215 (28.84%), Postives = 106/215 (49.30%), Query Frame = 1 Query: 43 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTD-EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 I L + Y +P VLR +S + K +VG +GSGKSTL + L + +P+ R ++ +PQ+ F GT+ N+ L + E+I+ A L D + ++ + DS + E G N S GQ+Q + + R +L +I++ DEAT+ +DT + I + L + D T+I IAH ++ D +++L G++ Sbjct: 469 IKLDKVSFSYNMKLP-VLRDVSLEIYSKSKVALVGVSGSGKSTLAKLLVKFYDPSEGNITYGDINCQDIENHKLRNHVTYVPQESFFFNGTIIDNLTFGLSHQPEFEKIFRACKAACLVDFINQQPLRFDSVLEEGGNNLSGGQKQRLAIARAILNDSEIIIFDEATSGLDTLLEKEILEYLIK-LQDKTIIFIAHHLSIAKACDEIIVLDQGIL 681
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB9_RAT (ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 60/223 (26.91%), Postives = 109/223 (48.88%), Query Frame = 1 Query: 28 PSH--GKIDLRDLQVRYA--PHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 P H G++D ++ Y PH VL+ +S + K T +VG +GSGKS+ + L +S++ Q+PV+F ++ N+ L E + EA K + + + ++ E G S GQ+Q V + R L++ +L+LDEAT+++D ++ LIQQ++ + TV+ IAHR+++V + ++++L G + Sbjct: 493 PDHLEGRVDFENVTFTYRTRPHTQ-VLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGEPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRV 714
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB9_MOUSE (ATP-binding cassette sub-family B member 9 OS=Mus musculus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 60/223 (26.91%), Postives = 109/223 (48.88%), Query Frame = 1 Query: 28 PSH--GKIDLRDLQVRYA--PHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 P H G++D ++ Y PH VL+ +S + K T +VG +GSGKS+ + L +S++ Q+PV+F ++ N+ L E + EA K + + + ++ E G S GQ+Q V + R L++ +L+LDEAT+++D ++ LIQQ++ + TV+ IAHR+++V + ++++L G + Sbjct: 493 PDHLEGRVDFENVTFTYRTRPHTQ-VLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRV 714
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB8_HUMAN (ATP-binding cassette sub-family B member 8, mitochondrial OS=Homo sapiens GN=ABCB8 PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 55/201 (27.36%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRL-SIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 VL+ + T P K +VG++G GK+T+ L R +P A R ++ I Q+PV+F T+ N+ + E +DE+++ A + + + ++ V E G S GQ+Q + + R L+K+ +L+LDEAT+++D ++ ++Q++L + + TV+ IAHR+++V + +++++ G + E Sbjct: 489 VLKDFTLTLPPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVMLDGRDLRTLDPSWLRGQVVGFISQEPVLFGTTIMENIRFGKLEASDEEVYTAAREANAHEFITSFPEGYNTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRGAHCIVVMADGRVWE 689
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB6B_ARATH (ABC transporter B family member 6 OS=Arabidopsis thaliana GN=ABCB6 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 61/222 (27.48%), Postives = 109/222 (49.10%), Query Frame = 1 Query: 34 HGKIDLRDLQVRYAPHMP--FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDE-QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSL-RQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 +G I+L+++ Y P P VL S G + +VG +GSGKST+I + R +P A R+ + +I Q+P++F T+R N+ E ++ EA + D+ + G + GQ+Q + + RV+LK IL++DEA++S+++ + ++Q++L + T I IAHR+ + D +++L+ G I E Sbjct: 1155 YGSIELKNIDFCY-PTRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSHMGLIQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTQGQKQRIAIARVVLKNAPILLIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRVAMMRHVDNIVVLNGGKIVE 1375 HSP 2 Score: 87.0409 bits (214), Expect = 1.022e-16 Identity = 55/219 (25.11%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 37 GKIDLRDLQVRYA--PHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G I+ R++ Y P +P +L G T P +K +VGR GSGKS++I + R +P R+++ ++ Q+P + ++R N+ + T +QI EA K + E +++V + G + Q+ + + R +L IL+LDE T +D + ++Q++L + I IA R++ + ++D + ++ G + E Sbjct: 410 GNIEFRNVYFSYLSRPEIP-ILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKKAHAHTFISSLEKGYETQVGKTGLTLTEEQKIKLSIARAVLLDPTILLLDEVTGGLDFEAERVVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLLE 627
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_RHOP5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisA53) GN=ndvA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 59/221 (26.70%), Postives = 107/221 (48.42%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G ++ ++ Y P + PG+ +VG TG+GKST I L R +P + R + ++ Q+ ++F+ T+ N+ + + T+E++ A + Q D + + E K D+ E G S G+RQ + + R LLK IL+LDEAT+++D T+ + +L + T IAHR++++ + +L+ +G + E S Sbjct: 343 GLVEFDNVSFSYDGKRPAIEDLSFTALPGQT-IALVGATGAGKSTAIALLHRAFDPQSGVIKIDGMDVRGLTLAGLRRNIGVVFQEALLFDRTIADNLRVGKPDATEEEMRIAASRAQALDFIERSELKFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFDNGRVIESGS 562
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCB8_PONAB (ATP-binding cassette sub-family B member 8, mitochondrial OS=Pongo abelii GN=ABCB8 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 55/201 (27.36%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRL-SIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 VL+ + T P K +VG++G GK+T+ L R +P A R ++ I Q+PV+F T+ N+ + E +DE+++ A + + + ++ V E G S GQ+Q + + R L+K+ +L+LDEAT+++D ++ ++Q++L + + TV+ IAHR+++V + +++++ G + E Sbjct: 472 VLKDFTLTLPPGKIVALVGQSGGGKTTVASLLERFYDPTAGVVMLDGRDLRTLDPSWLRGQVVGFISQEPVLFGTTIMENIRFGKLEASDEEVYAAAREANAHEFITSFPEGYNTIVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRGAHRIVVMADGRVWE 672
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris GN=ndvA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 56/218 (25.69%), Postives = 108/218 (49.54%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G ++ +++ Y P + PG+ +VG TG+GKST I L R +P + R + ++ Q+ ++F+ ++ N+ + + T E++ A ++ Q + + + + K D+ E G S G+RQ + + R LLK IL+LDEAT+++D T+ + +L + T IAHR++++ D+ +L+ +G + E Sbjct: 343 GLVEFQNVSFSYDGKRPAIEDLSFTALPGDT-IALVGATGAGKSTAIALLHRAFDPQSGVIKVDGMDIRGITLASLRRNIGVVFQEALLFDRSIADNLRVGKPDATPEELRLAAERAQALEFIERSDHKFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKLNLALDEVMKGRTTFVIAHRLSTIRDATRILVFDNGKVIE 559 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |