FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDLA_BUCBP (Multidrug resistance-like ATP-binding protein mdlA OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=mdlA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17 Identity = 58/219 (26.48%), Postives = 113/219 (51.60%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDE-QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATD-NLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G ++++ +Y+ +L+ I+ + GI G TGSGKSTL++ + R +E R ++SI+ Q +F T+ +N+ + Y + +I +A L +++ +++V E G S GQ+Q + + R LL + +IL+LD A +SVD T+ N+++ + T+I HR++S+I+SD+++++ +G I + Sbjct: 334 GILEVKINYFKYSKSNKTILKNINFKIRPGQILGICGPTGSGKSTLLKLIQRQIELYDGKISYHSIPITQFNIVEWRKKMSIVNQTTFLFSDTIANNIKLGKPYASQKEIEQATTFSDLHNDIMTFPQGYNTQVGERGIMLSGGQKQRISIARALLLKSEILILDNALSSVDNKTEINILENLKTWKKNKNTIIMCTHRLSSLINSDLIIVIENGSITQ 552
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MCHF_ECOLX (Probable microcin-H47 secretion/processing ATP-binding protein mchF OS=Escherichia coli GN=mchF PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17 Identity = 53/207 (25.60%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 43 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQ-IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVL 660 ++ DL RY V G++ + + I G +G+GK+TL++ L + EP + ++ + QD +F G++R N+ E TD++ + E + D + K ++ + E GE S GQ+Q + + R L ++ IL +DEAT+S+DT ++ + ++++ + T + IAHR T++ D ++ Sbjct: 492 LETTDLSYRYDSQSAQVFSGLNLSVAPGESVAITGASGAGKTTLMKVLCGLFEPDSGKVLVNGTDIRQLGINNYHRMIACVMQDDRLFSGSIRENICGFAEETDDEWMTECARASHIHDVIMKMPMGYETLIGELGEGLSGGQKQRIFIARALYRKPGILFMDEATSSLDTESERFVNAAIKK--MNITRVIIAHRETTLRTVDRII 696
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPS (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisB5) GN=ndvA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 59/231 (25.54%), Postives = 109/231 (47.19%), Query Frame = 1 Query: 4 KSRPNHSWPSH--GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 + RP+ P G ++ D+ Y P + PG+ +VG TG+GKST I L R +P + R + ++ Q+ ++F ++ N+ + + TD ++ A ++ Q D + + + D+ E G S G+RQ + + R LLK IL+LDEAT+++D T+ + +L + T IAHR++++ + +L+ +G + E Sbjct: 330 RDRPDAIDPGRLSGLVEFLDVSFSYDGKRPAIEDLSFTALPGQT-IALVGATGAGKSTAIALLHRAFDPQSGVVKIDGMDVRGLTMSGLRRNIGVVFQEALLFNRSIAENLRVGKPDATDAELRLAAERAQALDFIDRNDLGFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFDNGKVIE 559
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_PSEU2 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=msbA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 61/219 (27.85%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G +++++L Y VL IS + + +VGR+GSGKSTL + R R ++ + Q+ +F T+ +N+ L I A + + + D++V ENG S GQRQ + + R LLK +L+LDEAT+++DT ++ IQ +L T + IAHR++++ +D++L++ G I E Sbjct: 351 GHLEVKNLSFFYPQTARQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHDIGNILLDGVEINDYRLRNLRRHIAQVNQNVTLFNDTIANNIAYGDLAGAPRADIEAAAADAYAREFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKGRTTLVIAHRLSTIEKADLILVMDAGQIVE 569
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: SUNT_BPSPC (Sublancin-168-processing and transport ATP-binding protein sunT OS=Bacillus phage SPBc2 GN=sunT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 54/205 (26.34%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 73 APHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 A M +++ I+ + K I+G +G+GKST ++L ++ + R R+ I ++P +F+GT++ N+ E + +I A Q + + + + K++ENG N S GQ+Q + L R +L + ++L+LDE+ +++D LI ++L H DC +I I H S + L+ + I E Sbjct: 492 ADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL--HRMDCLIILITHNDPSNFKYNKKLVFRNNRIIE 694
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: SUNT_BACSU (SPBc2 prophage-derived sublancin-168-processing and transport ATP-binding protein sunT OS=Bacillus subtilis GN=sunT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 54/205 (26.34%), Postives = 100/205 (48.78%), Query Frame = 1 Query: 73 APHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 A M +++ I+ + K I+G +G+GKST ++L ++ + R R+ I ++P +F+GT++ N+ E + +I A Q + + + + K++ENG N S GQ+Q + L R +L + ++L+LDE+ +++D LI ++L H DC +I I H S + L+ + I E Sbjct: 492 ADPMRYIVEDINLILDRKDKVLIIGESGTGKSTFAKSLSKLYKVPDKSIYLNGLDINRYDHLSIRKRIVYIDENPFLFKGTIKENLCMGEIFDQNEIENACIMSQCHEFICNLDKQYSYKLSENGSNLSTGQKQRLALARAILHQPQVLILDESLSNIDPDNTKLIYETL--HRMDCLIILITHNDPSNFKYNKKLVFRNNRIIE 694
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_PSESM (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. tomato GN=msbA PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 61/219 (27.85%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G +++++L Y VL IS + + +VGR+GSGKSTL + R R ++ + Q+ +F ++ +N+ L I A + + + D++V ENG S GQRQ + + R LLK +L+LDEAT+++DT ++ IQ +L T + IAHR++++ +DM+L++ G I E Sbjct: 351 GHLEVKNLSFFYPQTERQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHEMGNILLDGVEINDYRLRNLRKHIAQVNQNVTLFNDSIANNIAYGDLAGAPRADIEAAAADAYAKEFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMKGRTTLVIAHRLSTIEKADMILVMDAGKIVE 569
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MCJD_ECOLX (Microcin-J25 export ATP-binding/permease protein mcjD OS=Escherichia coli GN=mcjD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 60/215 (27.91%), Postives = 105/215 (48.84%), Query Frame = 1 Query: 43 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEY--TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 + +R+L Y+ +L +S K + G +GSGKSTL++ + + + + QD +F T+R N+ L Y ++ +I++ L L V + LD+ + G N+S GQ+Q + L R+ L++ I+++DEAT+++D ++ I S+R HF D +I I+HRI + SD V +L+ G I Sbjct: 345 LSIRELSFSYSDDKK-ILNSVSLDLFTGKMYSLTGPSGSGKSTLVKIISGYYKNYFGDIYLNDISLRNISDEDLNDAIYYLTQDDYIFMDTLRFNLR-LANYDASENEIFKVLKLANLS-VVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEILSSIRTHFPDALIINISHRINLLECSDCVYVLNEGNI 556
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_DECAR (Lipid A export ATP-binding/permease protein msbA OS=Dechloromonas aromatica (strain RCB) GN=msbA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 57/216 (26.39%), Postives = 104/216 (48.15%), Query Frame = 1 Query: 100 GISCTFPGEKK---------------TGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G++ T+PG ++ +VG +GSGK+T L R A R ++++ QD V+F T+ +N+ + T ++I A + + L++ + ENG S GQRQ + + R +LK IL+LDEAT+++DT ++ +Q +L + + + IAHR++++ +D ++ L+HG +E S Sbjct: 345 GVTFTYPGSERPALDSVSLTVRPGECVALVGPSGSGKTTAANLLPRFYALDAGEIRVDGHALPNIRLNSLRDNIALVSQDVVLFNDTIGANIAYGGKRDATLDEIRAAAKAAHALEFIDALPEGLNTMIGENGVKLSGGQRQRLAIARAILKDAPILILDEATSALDTESERHVQAALDELMRGRSTLVIAHRLSTIERADRIIALAHGHKQEEGS 560
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MSBA_SHEDO (Lipid A export ATP-binding/permease protein msbA OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=msbA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 57/193 (29.53%), Postives = 99/193 (51.30%), Query Frame = 1 Query: 118 PGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXX-RTRLSIIPQDPVMFEGTVRSNVDPLE--EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 PG K +VGR+GSGKST+ + R R++++++ Q +F ++ +N+ E + EQI +A + + + LD++V ENG S GQRQ + + R +L+ +L+LDEAT+++DT ++ IQ L + T I IAHR++++ +D +L++ G I E Sbjct: 385 PG-KTVALVGRSGSGKSTMASLITRFYTGLEQGDIRLDDVSIYDYSLKSLRSQVALVSQQVTLFNDSIANNIAYAYPGEVSREQILKAATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQLGLDNLRHNRTSIVIAHRLSTIESADEILVIDQGKIIE 576 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |