FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NDVA_BRAJA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bradyrhizobium japonicum GN=ndvA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16 Identity = 55/218 (25.23%), Postives = 106/218 (48.62%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G ++ D+ Y P V PG+ +VG TG+GKST I L R +P + R + ++ Q+ ++F ++ N+ + + T+ ++ +A ++ Q + + ++ G ++ E G S G+RQ + + R LLK IL+LDEAT+++D T+ + +L + T IAHR+ ++ ++ +L+ +G + E Sbjct: 338 GLVEFNDVTFSYDGKRPAVEDLSFTALPGQT-VALVGPTGAGKSTAIALLHRAFDPQSGFIRIDGMDVRGVTLTSLRRNIGVVFQEALLFNRSIAENLRVGKPDATEAEMRKAAERAQALEFI-ERSGGFETNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEVKVNAALDEVMRGRTTFVIAHRLATIRNATRILVFENGRVTE 553
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y014_MYCGE (Putative ABC transporter ATP-binding protein MG014 OS=Mycoplasma genitalium GN=MG014 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 57/212 (26.89%), Postives = 100/212 (47.17%), Query Frame = 1 Query: 94 LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV-------DPLEEYTDEQIWEALD---KCQLGDE-VRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 L+ +S F K GIVG TGSGKS + + + EP + I+ Q ++F+GT+ SN+ + +D Q EA+ K D + K D V + G+N S GQ+Q V + R L+ + +IL+ D++ +++D T+ +++++ T I I+ I S+ +D +L++ +G I +DS Sbjct: 383 LQNLSFKFEAYKTYGIVGPTGSGKSLIANIIGGLYEPNEGEILIGGEKIQSIDSLYLSEMIGIVFQQNILFKGTISSNIKIGIETRSDWKNQSDLQKNEAMKNAAKIACADTFIEKFSDSYDHNVEQLGKNLSGGQKQRVAIARTLITKPRILVFDDSMSALDALTEKKVRENIENDLKLTTKIIISQNINSIKHADKILVIDNGRIVGFDS 594
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB17I_ARATH (ABC transporter I family member 17 OS=Arabidopsis thaliana GN=ABCI17 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15 Identity = 69/228 (30.26%), Postives = 111/228 (48.68%), Query Frame = 1 Query: 31 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-----PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVD-TATDNL--IQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEE 687 S KI + DL R A +L+G++ P G++G +GSGKST +++L R+ EP R R+ ++ Q PV+F+GTV NV E+ +DE++++ L L KK G S+GQ Q V L R L ++L+LDE T+++D +T+N+ + L++ TVI ++H I + +D+V L+ G I E Sbjct: 25 SEPKIRVHDL-TRVADDGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKK----------TGAELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTVI-VSHSIKQIQKVADIVCLVVDGEIVE 240
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: YNT9_SCHPO (Uncharacterized ABC transporter ATP-binding protein/permease C9B6.09c OS=Schizosaccharomyces pombe GN=SPBC9B6.09c PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 51/189 (26.98%), Postives = 94/189 (49.74%), Query Frame = 1 Query: 139 IVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLR--QHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 IV +G GKST+ Q L R P++ R+ ++ Q+PV+F GT+ N+ + E+I +A + + E K ++V G S GQ+Q + + R LL+ L+LDEAT+++D + ++ ++++ H T ITIAH++ ++ +D ++++ G + E S Sbjct: 515 IVAPSGGGKSTISQLLLRFYAPSSGKILADGVDISTYNVHQWRSHFGLVGQEPVLFSGTIGENIAYGKSNASQEEIEDAAKRANCSFVLSFPE-KWSTQVGTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAHKLATIRRADQIIVVGDGKVLEQGS 702
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDL1_YEAST (ATP-dependent permease MDL1, mitochondrial OS=Saccharomyces cerevisiae GN=MDL1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15 Identity = 60/226 (26.55%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 85 PFVLRGISCTFPGEKKTGI----------------VGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV----DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS-DCTVITIAHRITSVIDSDMVLLL-SHGLIEEYDS 696 P V + +S T+P K I VG +GSGKST+ L R + + R + + Q+P++F GT+ N+ P D++I A+ K + L + V G S GQ+Q + L R L +L+LDEAT+++D+ ++ ++ ++L++ T I+IAHR++++ S V++L HG + E S Sbjct: 431 PIVFKNVSFTYPTRPKHQIFKDLNITIKPGEHVCAVGPSGSGKSTIASLLLRYYDVNSGSIEFGDEDIRNFNLRKYRRLIGYVQQEPLLFNGTILDNILYCIPPEIAEQDDRIRRAIGKANCTKFLANFPDGLQTMVGARGAQLSGGQKQRIALARAFLLDPAVLILDEATSALDSQSEEIVAKNLQRRVERGFTTISIAHRLSTIKHSTRVIVLGKHGSVVETGS 656
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CYDD_HAEIN (ATP-binding/permease protein cydD OS=Haemophilus influenzae GN=cydD PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15 Identity = 52/189 (27.51%), Postives = 97/189 (51.32%), Query Frame = 1 Query: 118 PGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 P +VG++G+GK++L+ + + P R ++ + Q+P++ +GT++ N+ + + DE+I +AL + Q E K G L ++ + G S+GQ Q + + R LL++ +L+LDE TAS+D ++NL+ Q+L + T + I HRI + D + ++ G I Sbjct: 374 PANHNVALVGQSGAGKTSLMNVILGFL-PYEGSLKINGQELRESNLADWRKHIAWVGQNPLLLQGTIKENLLLGDVQANDEEINQALMRSQ-AKEFTDKLG-LHHEIKDGGLGISVGQAQRLAIARALLRKGDLLLLDEPTASLDAQSENLVLQALNEASQHQTTLMITHRIEDLKQCDQIFVMQRGEI 559
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: NIST_LACLA (Nisin transport ATP-binding protein nisT OS=Lactococcus lactis subsp. lactis GN=nisT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 57/226 (25.22%), Postives = 105/226 (46.46%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV---DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKV---TENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 G + + +L Y F L+ I+ +F + T IVG+ GSGKSTL++ + + +P + +S++ QD V +E T+R N+ D ++ DE+I + LD L + LD+++ + G S GQ Q + L R K+ I +LDE +A++D + I + I I+H + + ++ ++++ G +E+ S Sbjct: 350 GTVKVINLSYVYPNSNAFALKNINLSFEKGELTAIVGKNGSGKSTLVKIISGLYQPTMGIIQYDKMRSSLMPEEFYQKNISVLFQDFVKYELTIRENIGLSDLSSQWEDEKIIKVLDNLGLDFLKTNNQYVLDTQLGNWFQEGHQLSGGQWQKIALARTFFKKASIYILDEPSAALDPVAEKEIFDYFVALSENNISIFISHSLNAARKANKIVVMKDGQVEDVGS 575
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: TAP1_GORGO (Antigen peptide transporter 1 OS=Gorilla gorilla gorilla GN=TAP1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMP--FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ--HFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G + +D+ Y P+ P VL+G++ T + T +VG GSGKST+ L + +P +++ + Q+P +F +++ N+ ++ T E+I A KC + D++V E G S GQRQ V L R L+++ +L+LD+AT+++D + ++Q L + +V+ I ++ V +D +L L G I E Sbjct: 501 GLVQFQDVSFAY-PNRPDVLVLQGLTFTLHPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKCGAHSFISGLPQGYDTEVGEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIRE 722
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: STE6_YEAST (Alpha-factor-transporting ATPase OS=Saccharomyces cerevisiae GN=STE6 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14 Identity = 57/227 (25.11%), Postives = 110/227 (48.46%), Query Frame = 1 Query: 34 HGK-----IDLRDLQVRYAPHMP--FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDP--LEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 HGK + +++L Y P P FV + ++ + GI+G +G+GKSTL+ L ++ R +S++ Q P++F GT+R N+ +E + ++++AL + D V LD+++ S GQ Q +C+ R LL++ KIL+LDE T+++D+ + ++I + +++ + I H + + + +L G + E Sbjct: 1044 HGKEKKPIVSIQNLTFAY-PSAPTAFVYKNMNFDMFCGQTLGIIGESGTGKSTLVLLLTKLYNCEVGKIKIDGTDVNDWNLTSLRKEISVVEQKPLLFNGTIRDNLTYGLQDEILEIEMYDALKYVGIHDFVISSPQGLDTRIDTT--LLSGGQAQRLCIARALLRKSKILILDECTSALDSVSSSIINEIVKKGPPALLTMVITHSEQMMRSCNSIAVLKDGKVVE 1267 HSP 2 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 54/210 (25.71%), Postives = 91/210 (43.33%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV-----DPLEEY---TDEQIWEALDKCQ---LGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 VL+ +S F + T IVG++GSGKSTL L R + ++++ Q +F T+R N+ D + T+E D CQ L + L++ + G S GQ+Q V + R ++ IL LDEA +++D NL+ +++R T I + H ++ + D + L+ G + E Sbjct: 374 VLKNVSLNFSAGQFTFIVGKSGSGKSTLSNLLLRFYDGYNGSISINGHNIQTIDQKLLIENITVVEQRCTLFNDTLRKNILLGSTDSVRNADCSTNENRHLIKDACQMALLDRFILDLPDGLETLIGTGGVTLSGGQQQRVAIARAFIRDTPILFLDEAVSALDIVHRNLLMKAIRHWRKGKTTIILTHELSQIESDDYLYLMKEGEVVE 583
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: TAP1_RAT (Antigen peptide transporter 1 OS=Rattus norvegicus GN=Tap1 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14 Identity = 58/222 (26.13%), Postives = 104/222 (46.85%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPF-VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ--HFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G + +D+ Y H VL+G++ T K T +VG GSGKST+ L + +P T+++ + Q+P++F + R N+ T E+I + D + D++V E G S GQRQ V L R L+++ ++L+LD+AT+++D +Q+ L + ++ TV+ I +++ + +L L G + E Sbjct: 478 GLVKFQDVSFAYPNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPRLLILDDATSALDAGNQLRVQRLLYESPEWASRTVLLITQQLSLAERAHHILFLKEGSVCE 699 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |