FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDR_PLAFF (Multidrug resistance protein OS=Plasmodium falciparum (isolate FC27 / Papua New Guinea) GN=MDR1 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14 Identity = 45/139 (32.37%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 265 RTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSL--RQHFSDCTVITIAHRITSVIDSDMVLLLSH 672 R SI+ Q+P++F ++ N+ E+ T E + + + + K D+ V G++ S GQ+Q + + R LL+ KIL+LDEAT+S+D+ ++ LI++++ + +D T+ITIAHRI S+ SD +++ ++ Sbjct: 1248 RNLFSIVSQEPMLFNMSIYENIKFGREDATLEDVKRVSKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNN 1386
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDLA_BUCAI (Multidrug resistance-like ATP-binding protein mdlA OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=mdlA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 55/221 (24.89%), Postives = 105/221 (47.51%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ-HFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 +P++ K L+D+++ P GI G TGSGKSTL+ + R R R++++ Q +F T+ +N+ + ++I E + ++ + +++V E G S GQ+Q VC+ R LL +IL+LD+A ++VD T+N I +++ + ++I HR++++I+SD ++++ G I Sbjct: 344 YPNNQKPSLKDIRILIKPG---------------NTLGICGPTGSGKSTLLMLIQRQFNFKKEEIHYHSLSLLEIKIDDWRRRIAVVNQTSFLFSDTISNNISLGKPNASQKEIEEVAKLADVHKDIIDLPERYETQVGERGVMLSGGQKQRVCIARALLLNAEILILDDALSAVDAQTENNILKNINEWKKKKHSLIITTHRLSALINSDEIIVIKSGSI 549
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: AB26B_ARATH (ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana GN=ABCB26 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14 Identity = 55/199 (27.64%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 118 PGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPL--EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDC----TVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 PGE IVG +GSGKSTL+ L ++ EP + R R+ + Q+P +F + SN+ + E I A + D + ++ V + + S GQ+Q + + R +L+ +IL+LDEAT+++D +++ ++ LR +D +VI IAHR++++ +D ++ + G + E S Sbjct: 482 PGEV-VAIVGLSGSGKSTLVNLLLQLYEPTSGQILLDGVPLKELDVKWLRQRIGYVGQEPKLFRTDISSNIKYGCDRNISQEDIISAAKQAYAHDFITALPNGYNTIVDD--DLLSGGQKQRIAIARAILRDPRILILDEATSALDAESEHNVKGVLRSIGNDSATKRSVIVIAHRLSTIQAADRIVAMDSGRVVEMGS 677
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: TAP1_HUMAN (Antigen peptide transporter 1 OS=Homo sapiens GN=TAP1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 59/223 (26.46%), Postives = 106/223 (47.53%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMP--FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ--HFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G + +D+ Y P+ P VL+G++ T + T +VG GSGKST+ L + +P +++ + Q+P +F +++ N+ ++ T E+I A K + D++V E G S GQRQ V L R L+++ +L+LD+AT+++D + ++Q L + +V+ I ++ V +D +L L G I E Sbjct: 561 GLVQFQDVSFAY-PNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIRE 782
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CVAB_ECOLX (Colicin V secretion/processing ATP-binding protein cvaB OS=Escherichia coli GN=cvaB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 50/208 (24.04%), Postives = 98/208 (47.12%), Query Frame = 1 Query: 43 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIW--EALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVL 660 ++ L RY + +S + + I G +G+GK+TL++ L + EP + ++ + QD +F G++R N+ E DE+ W E + D + ++ + E GE S GQ+Q + + R L ++ IL +DEAT+++D+ +++ + +++ + T + IAHR T++ D V+ Sbjct: 492 LETNGLSYRYDSQSAPIFSALSLSVAPGESVAITGASGAGKTTLMKVLCGLFEPDSGRVLINGIDIRQIGINNYHRMIACVMQDDRLFSGSIRENICGFAEEMDEE-WMVECARASHIHDVIMNMPMGYETLIGELGEGLSGGQKQRIFIARALYRKPGILFMDEATSALDSESEHFVNVAIKN--MNITRVIIAHRETTLRTVDRVI 696
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CYDD_BACSU (ATP-binding/permease protein cydD OS=Bacillus subtilis GN=cydD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13 Identity = 50/199 (25.13%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 91 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIE 684 VL S T +K ++GR+GSGKST + + ++P + ++++ Q P +F+ ++ +N+ E +DE + A + +L D + + V E G +S G+RQ + L R+LL+ I++LDE T +D T+ + +++ + T++ I H + V +D ++ L +G E Sbjct: 352 VLHNFSFTLRQGEKMALLGRSGSGKSTSLALIEGALKPDSGSVTLNGVETALLKDQIADA-VAVLNQKPHLFDTSILNNIRLGNGEASDEDVRRAAKQVKLHDYIESLPDGYHTSVQETGIRFSGGERQRIALARILLQDTPIIILDEPTVGLDPITERELMETVFEVLKGKTILWITHHLAGVEAADKIVFLENGKTE 549
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: Y018_MYCPN (Putative ABC transporter ATP-binding protein MG014 homolog OS=Mycoplasma pneumoniae GN=MPN_018 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 51/212 (24.06%), Postives = 97/212 (45.75%), Query Frame = 1 Query: 94 LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDE-----------VRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 L+ ++ F K GIVG TGSGKS + + + EP + I+ Q ++F+GT+ SN+ E ++ E K + + K D V + G+N S GQ+Q V + R ++ + +IL+LD++ +++D T+ +++++ T I I+ I S+ + ++++ +G I +DS Sbjct: 383 LQDLNFKFEAGKTYGIVGPTGSGKSLIANIIGGLYEPNQGEIFVGGQSIKTIDSDYLAKMIGIVFQQNILFKGTIASNIKIGLETREDWKHEPDSKKDAAMKRAAAIACADTFIEKFSDTYDHTVEQLGKNLSGGQKQRVAIARTVITKPQILVLDDSMSALDALTEKKVRENIANELPGTTKIIISQNINSIKYAHKIMVIDNGRIAGFDS 594
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: MDLA_BUCAP (Multidrug resistance-like ATP-binding protein mdlA OS=Buchnera aphidicola subsp. Schizaphis graminum GN=mdlA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 52/218 (23.85%), Postives = 110/218 (50.46%), Query Frame = 1 Query: 34 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVD-PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ-HFSDCTVITIAHRITSVIDSDMVLLLSHGLI 681 +GK+++ Y + L+ I + K GI G TG+GKSTL++ + R + R+++ ++ Q +F ++ +N+ + + ++I +A + ++ +++V E G S GQ+Q + + R LL +IL+LD+A ++VD T+N I ++L++ ++I +AHR++++I +D ++++ G I Sbjct: 332 NGKLNINIDMFFYPKNKKPSLKNIYLSLNPGKTLGICGPTGAGKSTLLKLIQRQFKIHKGEILYNSSSLLELKIDYWRSKIGVVNQTSFLFSDSISNNISLGKPKASQKEIEKAAKLADIHKDIVCLPQGYNTQVGERGVMLSGGQKQRIAIARALLLNTEILILDDALSAVDGKTENNILKNLKKWKDKGYSLIIVAHRLSALIHADEIIVIKEGTI 549
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: TAP1_MOUSE (Antigen peptide transporter 1 OS=Mus musculus GN=Tap1 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 58/223 (26.01%), Postives = 104/223 (46.64%), Query Frame = 1 Query: 37 GKIDLRDLQVRYAPHMPFV--LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNV--DPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ--HFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 687 G ++ +D+ Y P+ P V L+G++ T T +VG GSGKST+ L + +P T+++ + Q+P++F + R N+ T E+I + D + D++V E G S GQRQ V L R L+++ +L+LD+AT+++D +Q+ L + + TV+ I +++ + +L L G + E Sbjct: 477 GLVEFQDVSFAY-PNQPKVQVLQGLTFTLHPGTVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGQRLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLNRTPTMEEITAVAVESGAHDFISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPLLLILDDATSALDAGNQLRVQRLLYESPKRASRTVLLITQQLSLAEQAHHILFLREGSVGE 698
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: APRD_PSEAE (Alkaline protease secretion ATP-binding protein aprD OS=Pseudomonas aeruginosa GN=aprD PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.169e-12 Identity = 51/200 (25.50%), Postives = 90/200 (45.00%), Query Frame = 1 Query: 94 LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQ-HFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690 LRG++ P G++G +GSGKS+L + + I R+ +PQD +F GTV N+ E +++ EA + + V + D+ + G S GQRQ + L R L +++LDE +++D + + + +++ CTV+ I HR + +D +L L+ G + Y Sbjct: 349 LRGLTLAIPAGSVVGVIGPSGSGKSSLARVVLGIWPTLHGSVRLDGAEIRQYERETLGPRIGYLPQDIELFAGTVAENIARFGEVQADKVVEAARLAGVHELVLRLPQGYDTVLGVGGAGLSGGQRQRIALARALYGAPTLVVLDEPNSNLDDSGEQALLAAIQALKARGCTVLLITHRAGVLGCADRLLALNAGQLHLY 548 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |