FC931255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCC9_DICDI (ABC transporter C family member 9 OS=Dictyostelium discoideum GN=abcC9 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.325e-40 Identity = 86/226 (38.05%), Postives = 135/226 (59.73%), Query Frame = 1 Query: 22 SWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW-SMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 +WP G I ++QV Y + L+ I+ + +K GIVGRTG+GKST+ LFR+VE + R L I+PQ+P +F GT+RSN+DPL +Y DE IW L+ +L + + KL+SK+ ENG S GQ+QL+CL R L+K K++++DEAT+SVD T I+ + ++ + T++TIAHR+ +IDSD + ++ + + E+++ Sbjct: 1096 NWPEKGNIQFNNVQVNYNSNSVPSLKDITFSVESNEKIGIVGRTGAGKSTIANCLFRLVECSKGSILIDGIDIKTIDLNKLRGSLGIVPQEPWLFSGTIRSNIDPLNQYDDEMIWNYLEMVKLKKLIIEMPLKLNSKIHENGNTTLSYGQKQLLCLCRCLIKNPKLIIMDEATSSVDFQTAETIKSVINENLVNNTILTIAHRLDIIIDSDKIAVIDNSKLIEFEN 1321
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABCC7_DICDI (ABC transporter C family member 7 OS=Dictyostelium discoideum GN=abcC7 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40 Identity = 84/225 (37.33%), Postives = 138/225 (61.33%), Query Frame = 1 Query: 22 SWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHG-LIEEYD 693 +WP G+I ++++++Y P++ L+ IS +K GIVG++GSGKST + LFR++E + R + I PQ+P +F GT+R N+DP Y+D +IW AL+K +L + + K+D+ + E N S GQ+QL+CL RVLLK K++ DE ++S+D T + + S++++ ++ T +TIAHRI ++IDSD +L++ G LIE +D Sbjct: 1076 NWPQKGEIQFKNVEIKYRPNLKPSLKNISFDIKSNEKIGIVGKSGSGKSTTMLALFRMIECSKGSIHIDGIDISKISLSKLRNSIGICPQEPFIFSGTIRKNIDPFGIYSDSEIWLALEKVKLKETISLLPMKIDTIIHEQA-NLSFGQKQLLCLTRVLLKSPKLVFFDEHSSSIDYFTAHQLNISVKENITNSTTLTIAHRIDTIIDSDRILVIDSGELIEIFD 1299
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABC4_SCHPO (ATP-binding cassette transporter abc4 OS=Schizosaccharomyces pombe GN=abc4 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40 Identity = 88/230 (38.26%), Postives = 129/230 (56.09%), Query Frame = 1 Query: 22 SWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLG-------DEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 690 +WP G I + V Y+ P +L+ ++ +K +VGRTGSGKSTL TL R + R R+S IPQDP++F GTVRSN+DP +E D + EAL D+ + LD+ V G N+S GQ+Q++ L R +++R KI++LDE TASVD A D IQ++LR+ F D T++ IAHR+ +++D D V++L G++ EY Sbjct: 1205 TWPKEGDIVFNHVSVSYSAAGPTILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYINGRETQSVNLNALRQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHITLDTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLREAFGDATMLCIAHRLKTIVDYDKVMVLDKGVLVEY 1434
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: ABC1_SCHPO (ATP-binding cassette transporter abc1 OS=Schizosaccharomyces pombe GN=abc1 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.122e-39 Identity = 95/235 (40.43%), Postives = 131/235 (55.74%), Query Frame = 1 Query: 16 NHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALD--KCQLGDEVRKKEG------KLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 N WP+ G + +++L V Y+ VL I+ ++K IVGRTGSGKST+ TL R + R R+S+IPQDPV+ GTVRSN+DP EEY D ++ E L C+ + K LD+ V G N+S GQRQ++ L R L+++ +I++LDE+TASVD TD IQQ LR F TV+ IAHRI +++D D VL+L G E+ S Sbjct: 1171 NKEWPTLGHVSIKNLTVSYSIGQAAVLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMSGAVEVDGIDINSLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASNKNSLDAFAIHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQMLRAAFKHATVLCIAHRIKTIVDYDKVLVLDSGKTVEFGS 1405 HSP 2 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 48/184 (26.09%), Postives = 84/184 (45.65%), Query Frame = 1 Query: 88 FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQS--LRQHFSDCTVITIAHRIT 633 F L+ ++ T P + T +VG TGSGKSTL L + + R++ +PQ + GT+RSN+ E Y +E+ ++ + C L ++ + + NG + S GQ+Q V L R L ++ + D+ +++D +T I +S L T+I H ++ Sbjct: 595 FQLKNLNFTIPRNQFTLVVGSTGSGKSTLAMALLGELHVISGKMTTPSISQ----------RIAYVPQAAWLRNGTIRSNILFGEPYDEERYFQIIKACCLDSDLNSMNDGDLTYIHSNGSSLSGGQKQRVSLARALYSNAEVYIFDDIFSALDVSTSRKIYESCFLSTLLQHKTIILFTHNVS 768
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CFTR_HYLLE (Cystic fibrosis transmembrane conductance regulator OS=Hylobates leucogenys GN=CFTR PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.804e-37 Identity = 78/224 (34.82%), Postives = 127/224 (56.70%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 WPS G++ ++DL +Y +L IS + ++ G++GRTGSGKSTL+ L R++ R +IPQ +F GT R N+DP E+++D++IW+ D+ L + + GKLD + + G S G +QL+CL R +L + KIL+LDE +A +D T +I+++L+Q F+DCTVI HRI ++++ L++ + +YDS Sbjct: 1204 WPSGGQMTVKDLSAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSALLRLLNTEGEIQIDGVSWDSITLQQW-RKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDS 1426
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CFTR_ATEGE (Cystic fibrosis transmembrane conductance regulator OS=Ateles geoffroyi GN=CFTR PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.161e-36 Identity = 78/229 (34.06%), Postives = 128/229 (55.90%), Query Frame = 1 Query: 10 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 + N WPS G++ ++DL +Y +L IS + ++ G++GRTGSGKSTL+ R++ R +IPQ +F GT R N+DP E+++D++IW+ D+ L + + GKLD + + G S G +QL+CL R +L + KIL+LDE +A +D T +I+++L+Q F+DCTVI HRI ++++ L++ + +YDS Sbjct: 1199 KKNDIWPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLQQW-RKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDS 1426
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CFTR_CERAE (Cystic fibrosis transmembrane conductance regulator OS=Cercopithecus aethiops GN=CFTR PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36 Identity = 78/224 (34.82%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 WPS G++ ++DL +Y +L IS + ++ G++GRTGSGKSTL+ R++ R +IPQ +F GT R N+DP E+++D++IWE D+ L + + GKLD + + G S G +QL+CL R +L + KIL+LDE +A +D T +I+++L+Q F+DCTVI HRI ++++ L++ + +YDS Sbjct: 1205 WPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLQQW-RKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWEVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDS 1427
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CFTR_MICMU (Cystic fibrosis transmembrane conductance regulator OS=Microcebus murinus GN=CFTR PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36 Identity = 78/224 (34.82%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 WPS G++ ++DL RY +L IS + ++ G++GRTGSGKSTL+ R++ R +IPQ +F GT R N+DP E+++D++IW+ D+ L + + GKLD + + G S G +QL+CL R +L + KIL+LDE +A +D T +I+++L+Q F+DCTVI HRI ++++ L++ + +YDS Sbjct: 1205 WPSGGQMTVKDLTARYLDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLQQW-RKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQAFADCTVILCEHRIEAMLECQRFLVIEENNVRQYDS 1427
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CFTR_SAIBB (Cystic fibrosis transmembrane conductance regulator OS=Saimiri boliviensis boliviensis GN=CFTR PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36 Identity = 77/224 (34.38%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 WPS G++ ++DL +Y +L IS + ++ G++GRTGSGKSTL+ R++ R +IPQ +F GT R N+DP E+++D++IW+ D+ L + + GKLD + + G S G +QL+CL R +L + KIL+LDE +A +D T +I+++L+Q F+DCTVI HRI ++++ L++ + +YDS Sbjct: 1205 WPSGGQMTIKDLTAKYVEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLQQW-RKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDS 1427
BLAST of FC931255 vs. ExPASy Swiss-Prot
Match: CFTR_PONAB (Cystic fibrosis transmembrane conductance regulator OS=Pongo abelii GN=CFTR PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36 Identity = 77/224 (34.38%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 25 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAXXXXXXXXXXXXXXXXXXRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 696 WPS G++ ++DL +Y +L IS + ++ G++GRTGSGKSTL+ R++ R +IPQ +F GT R N+DP E+++D++IW+ D+ L + + GKLD + + G S G +QL+CL R +L + KIL+LDE +A +D T +I+++L+Q F+DCTVI HRI ++++ L++ + +YDS Sbjct: 1204 WPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLQQW-RKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDS 1426 The following BLAST results are available for this feature:
BLAST of FC931255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931255 ID=FC931255; Name=FC931255; organism=Citrus clementina; type=EST; length=698bpback to top |