FC931260

Overview
NameFC931260
Unique NameFC931260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_LACBS (NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor (strain S238N-H82) GN=MCR1.1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.198e-23
Identity = 64/165 (38.79%), Postives = 94/165 (56.97%), Query Frame = 3
Query:  222 QINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            ++   T PK  L+P  W  F LQ   +VS N+ ++ F   P A+  LGL +   I   A +      N K +VR YTPIS   A+G F+L+IK Y +G +S+H ASLK GD + VKGP    +Y+P +  H+GMIAG     PM+Q++ AIL+     + +T ++
Sbjct:   51 KVFNSTRPK-PLDPSIWKEFPLQKKNQVSPNTAIYTFKL-PHAEDVLGLPIGQHISVSADI------NGKNIVRSYTPISRQNARGRFELIIKTYEKGNISRHVASLKIGDTLRVKGPKGNFKYTPGLTAHLGMIAGGTGLAPMIQIVRAILQNPPDRTNITLIY 207          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_PICST (NADH-cytochrome b5 reductase 1 OS=Pichia stipitis GN=CBR1 PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23
Identity = 68/157 (43.31%), Postives = 87/157 (55.41%), Query Frame = 3
Query:  255 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSA-KLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAIL-------KIQMTHSGVT 701
            L PD +  F L +  RVSHNS ++RF    S  +LGL +   I   A +G       K VVR YTPIS  +  G+FDLLIK Y  G +S+H  S K G+ VE++GP     Y+PNM K  GMIAG     PM Q+I AIL       KI + ++ VT
Sbjct:   38 LKPDTFQKFPLIEKTRVSHNSSVYRFGLPKSTDRLGLPIGQHISIGATIGG------KEVVRSYTPISTDDELGYFDLLIKTYENGNISKHVDSKKVGEYVEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILRNPADKTKISLIYANVT 188          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23
Identity = 73/179 (40.78%), Postives = 95/179 (53.07%), Query Frame = 3
Query:  141 PFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSA-KLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            PF   A VA  +S +  +       L Q  + T     L PD++  F L +  RVSHNS ++RF    S  +LGL +   I     +G   +G  K VVR YTPIS  +  GHFDLLIK Y  G +S+H A    G+ +E++GP     Y+PNM K  GMIAG     PM Q+I AILK
Sbjct:   18 PFIVFATVATIISAFIGY-----YFLQQSKKHTP---VLKPDEFQKFPLIEKIRVSHNSAIYRFGLPKSTDRLGLPIGQHI----SIGATIDG--KEVVRSYTPISTDDQLGHFDLLIKTYENGNISRHVAGKNVGEHIEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILK 182          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_MAGGR (NADH-cytochrome b5 reductase 2 OS=Magnaporthe grisea GN=MCR1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23
Identity = 65/157 (41.40%), Postives = 87/157 (55.41%), Query Frame = 3
Query:  243 PKIALNPDK-WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAV 707
            PK AL  +K ++  +L D   V+HN+   RF       + GL VAS +LT+       EG  K V+RPYTPISD + KG+ DL++K Y  G MS H   L PG  ++ KGP+ K  +S N   H+ MIAG    TPM Q++ AI K     + VT V
Sbjct:   72 PKKALEMEKGFVSLQLDDVEVVNHNTKRLRFKLPEDDMVSGLHVASALLTKFK----PEGAEKPVLRPYTPISDEDQKGYLDLIVKKYEGGPMSTHIHELVPGQKLDFKGPLPKYEWSANKHPHVAMIAGGTGITPMYQIMRAIFKNPADKTKVTLV 224          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_CHAGB (NADH-cytochrome b5 reductase 2 OS=Chaetomium globosum GN=MCR1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = 3
Query:  144 FGAIAAVAGGVSYYCYFSSPNLVHLDQ----INEETGPKIALNPDK---------WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR-APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            +GA AA   G  YY    +P     ++     +     K++ +  K         W+  KL++   V+HNS   RF       + G+ VAS ILT+  P+  DAE   K V+RPYTP +D +A+G+ DLL+K YP G MS H   + PG  ++VKGP+ K  ++ N   HI ++AG    TPM Q+  AI       + VT V+
Sbjct:   44 YGAAAAAVAGAGYYFLGGTPAAKKAEEKVKDASSAAAGKLSTSEVKQALTGGEQGWVSLKLEEVEIVNHNSKRLRFRLPEDDMVSGVHVASAILTKFKPV--DAE---KPVIRPYTPTNDEDARGYLDLLVKKYPNGPMSTHLHDMVPGQRLDVKGPLPKYPWTANKHGHIALVAGGTGITPMFQLCRAIFNNPDDQTKVTLVF 242          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_ASPFU (NADH-cytochrome b5 reductase 2 OS=Aspergillus fumigatus GN=mcr1 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23
Identity = 65/158 (41.14%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  243 PKIALNPDK-WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            PK+    D+ W+  KL     +S N+   RF F D  A  GL VAS +LT+       +G  K V+RPYTP+SD E  G+ DL++KVYP G MS+H  S+     +E KGPI K  +  N  KHI +IAG    TPM Q+   I K     + VT V+
Sbjct:   64 PKVFTGGDQGWVDLKLAQIENLSPNTKRLRFEFPDKEAVSGLHVASALLTKFK----PQGAEKPVIRPYTPVSDEEQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWEANKHKHICLIAGGTGITPMYQLARKIFKDPEDQTKVTLVF 217          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_NEOFI (NADH-cytochrome b5 reductase 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.668e-23
Identity = 65/158 (41.14%), Postives = 85/158 (53.80%), Query Frame = 3
Query:  243 PKIALNPDK-WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            PK+    D+ W+  KL     +S N+   RF F D  A  GL VAS +LT+        G  K V+RPYTP+SD E  G+ DL++KVYP G MS+H  S+     +E KGPI K  +  N  KHI +IAG    TPM Q+   I K     + VT V+
Sbjct:   64 PKVFTGGDQGWVDLKLAQIENLSPNTKRLRFEFPDKEAVSGLHVASALLTKFK----PHGAEKPVIRPYTPVSDEEQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWEANKHKHICLIAGGTGITPMYQLARKIFKDPEDQTKVTLVF 217          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_ASPNC (NADH-cytochrome b5 reductase 2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.484e-23
Identity = 69/191 (36.13%), Postives = 94/191 (49.21%), Query Frame = 3
Query:  144 FGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDK-WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            + A+     GV  Y Y    N    +       PK+    D+ W   KL +   ++HN+   RF F D  A  GL VAS +LT+         + K V+RPYTP SD E  G+ DL++KVYP G MS+H  S+  G  ++ KGPI K  +  N   HI +IAG    TPM Q+   I K     + VT V+
Sbjct:   35 YAAVGITGVGVGLYRY----NSATAEAPAAVDRPKVFKGGDQGWFDLKLSEIEVLNHNTKRLRFEFEDKEALSGLQVASALLTKFK-----PADAKAVIRPYTPTSDEETPGYIDLVVKVYPNGPMSEHLHSMNVGQRLDFKGPIVKYPWETNKHNHICLIAGGTGITPMYQLAREIFKNPEDQTKVTLVF 216          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_COCIM (NADH-cytochrome b5 reductase 2 OS=Coccidioides immitis GN=MCR1 PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.551e-23
Identity = 68/191 (35.60%), Postives = 95/191 (49.74%), Query Frame = 3
Query:  144 FGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDK-WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            +G +A  AGG  YY             + E +  K+ +  D+ W+  KL     +SHN   FRF F  S  + GL +AS +LT+    +D     K  +RPYTP+S+ E  G+ DL++K YP G MS H  ++  G  +  KGPI K  +  N   HI MIAG    TPM Q+I  I       + VT V+
Sbjct:   35 YGGLALAAGGAYYYWQRQQSPQALEAALKERS--KVFIGGDQGWVDLKLAGIETLSHNVKRFRFEFPDSESVSGLHIASALLTKYKGPKDE----KPTIRPYTPVSEEEQPGYLDLVVKQYPNGPMSTHLHNMAVGQQLSFKGPIPKYPWEQNKHDHICMIAGGTGITPMYQIIRKIFNNPNDKTKVTLVF 219          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_DEBHA (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22
Identity = 68/194 (35.05%), Postives = 100/194 (51.55%), Query Frame = 3
Query:  144 FGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSA-KLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAIL-------KIQMTHSGVT 701
            F  +AA+      Y +F         Q++ +  P   L P+ +  F L +  RVSHN+ ++RF    S  +LGL +   I   A +      N K VVR YTPIS  +  G+FDLLIK Y  G +S+H  S K G+ ++++GP     Y+P M +  GMIAG    TPM Q++ AIL       K+ + ++ VT
Sbjct:   12 FATVAAIISSAVAYYFF---------QLSRKNAP--VLKPNDFQKFPLIEKTRVSHNTCVYRFGLPRSTDRLGLPIGQHIAIGATI------NDKEVVRSYTPISTDDELGYFDLLIKAYENGNISRHVESKKIGETIDIRGPKGFFTYTPGMVESFGMIAGGTGITPMYQILTAILRNPEDKTKVSLVYANVT 188          
The following BLAST results are available for this feature:
BLAST of FC931260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
NCB5R_LACBS1.198e-2338.79NADH-cytochrome b5 reductase 1 OS=Laccaria bicolor... [more]
NCB5R_PICST1.564e-2343.31NADH-cytochrome b5 reductase 1 OS=Pichia stipitis ... [more]
NCB5R_CANAL1.564e-2340.78NADH-cytochrome b5 reductase 1 OS=Candida albicans... [more]
MCR1_MAGGR1.564e-2341.40NADH-cytochrome b5 reductase 2 OS=Magnaporthe gris... [more]
MCR1_CHAGB1.564e-2334.80NADH-cytochrome b5 reductase 2 OS=Chaetomium globo... [more]
MCR1_ASPFU1.564e-2341.14NADH-cytochrome b5 reductase 2 OS=Aspergillus fumi... [more]
MCR1_NEOFI2.668e-2341.14NADH-cytochrome b5 reductase 2 OS=Neosartorya fisc... [more]
MCR1_ASPNC3.484e-2336.13NADH-cytochrome b5 reductase 2 OS=Aspergillus nige... [more]
MCR1_COCIM4.551e-2335.60NADH-cytochrome b5 reductase 2 OS=Coccidioides imm... [more]
NCB5R_DEBHA1.014e-2235.05NADH-cytochrome b5 reductase 1 OS=Debaryomyces han... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34103C03EF PostHarvP1 Citrus clementina cDNA clone C34103C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931260 ID=FC931260; Name=FC931260; organism=Citrus clementina; type=EST; length=727bp
GACTTTTCTTTGCTTTGCTTCTTCTCCAACATTAGAAAATGGCTACGACC
TTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCATT
TGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGAG
CAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATCC
CCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAAT
TGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCAA
GGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGCC
AAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAGG
ACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCTA
TATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTAT
CCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATGT
AGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATGA
AGAAACACATCGGCATGATAGCTGGGTGGCACAGGTATACTCCTATGCTT
CAGGTAATTGAGGCTATACTGAAGATCCAGATGACACACTCAGGTGTCAC
TGCTGTATGGCATATATCCCAGATGAT
back to top