FC931260

Overview
NameFC931260
Unique NameFC931260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9476 contig Ccv1_Contig9476:14..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_ASPOR (NADH-cytochrome b5 reductase 2 OS=Aspergillus oryzae GN=mcr1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22
Identity = 59/149 (39.60%), Postives = 85/149 (57.05%), Query Frame = 3
Query:  270 WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTR-APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            W+  KL +   +SHN+   RF F D  A  G+ +AS +LT+  P+G +     K V+RPYTP SD +  G+ DL++KVYP G MS+H  S+     +  KGP+ K ++  N  +HI +IAG    TPM Q+I  I K     + VT V+
Sbjct:   74 WVDLKLSEIEVLSHNTKRLRFEFEDKEAVSGVTIASALLTKFKPVGAE-----KAVLRPYTPTSDEDQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLSFKGPLPKYQWETNKHEHIALIAGGTGITPMYQLIRQIFKNPDDKTKVTLVY 217          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_CRYNE (NADH-cytochrome b5 reductase 1 OS=Cryptococcus neoformans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22
Identity = 59/141 (41.84%), Postives = 84/141 (59.57%), Query Frame = 3
Query:  255 LNPDKWIGFKLQDTARVSHNSHLFRFSFD-PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            L+P +W  FKL D   +SHN+ L+RF+    S  LGL +   I   A +      N K VVR YTP +  + KGHFDL++K Y +G +S++ + L  G  ++VKGP  K  Y+PNM  H+ MIAG    TPM Q+I++ +K
Sbjct:   41 LDPVEWRSFKLVDKDHLSHNTALYRFALPRASDSLGLPIGQHISVAAEI------NGKQVVRSYTPTTLDDDKGHFDLVVKTYEKGNISRYLSLLTIGQEIKVKGPKGKFVYTPNMAPHLVMIAGGTGITPMYQIIKSSIK 175          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_NEUCR (NADH-cytochrome b5 reductase 2 OS=Neurospora crassa GN=mcr-1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22
Identity = 75/217 (34.56%), Postives = 109/217 (50.23%), Query Frame = 3
Query:   96 AFGGQPKSDFNKFRFPFGAIAAVAGGVSYYCYFSSPNLVH-----LDQINEETGP----KIALNPDK-WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR-APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            ++  +P    +      GA A    G   Y +FS           + Q+ E+  P    K  +  D+ W+  KL++   V+HN+   RF       + GL VAS ILT+  P+  DAE   K V+RPYTPISD  A+G+ DLL+K Y  G MS +   + PG  +++KGP+ K  +  N  KHI ++AG    TPM Q+I AI       + VT V+
Sbjct:   27 SYATEPSKGGSSSTILLGAAAVGLAGAGAY-FFSGAGAAKKAEASVKQVTEKITPGEIKKAFVGGDQGWLSLKLEEVELVNHNTKRLRFRLPEDDMVSGLHVASAILTKFKPI--DAE---KAVLRPYTPISDESAQGYIDLLVKKYEGGPMSTYLHDMAPGQRLDIKGPLPKYPWEANKHKHIALVAGGTGITPMYQLIRAIFNNPDDKTKVTLVF 237          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_ASPTN (NADH-cytochrome b5 reductase 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mcr1 PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22
Identity = 68/181 (37.57%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  171 GVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            GV  Y Y S+      ++    TG         W+  KL +   ++HN+  FRF F D  A  GL+VAS +LT+       EG  K V+RPYTP+SD    G  DL++KVYP G MS+H  S+     +E KGP+ K  +  N  +HI +IAG    TPM Q+   I K     + VT V+
Sbjct:   43 GVGLYRYNSATAEAPAERAKVFTG-----GDQGWVDLKLSEIEVLNHNTKRFRFEFEDKEAVSGLNVASALLTKFK----PEGG-KAVLRPYTPVSDESQPGFLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPLPKYPWEANKHQHICLIAGGTGITPMYQLARHIFKNPEDKTKVTLVY 213          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: YMM5_YEAST (Uncharacterized oxidoreductase YML125C OS=Saccharomyces cerevisiae GN=YML125C PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22
Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 3
Query:  252 ALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKI 677
            +L PD+W   +L+D   +S N+ L+RF      + L +     +  R P+      + K  VR Y PIS     G+ DL++K Y +GK+S++FA L  GD V+ KGPI  L Y PN  KH+G++AG    TP+LQ++  I+ +
Sbjct:   66 SLYPDRWTSLELEDQTIISKNTALYRFKLKTRLESLDIPAGHHVAVRVPI------DGKQEVRYYNPISSKLESGYLDLVVKAYVDGKVSKYFAGLNSGDTVDFKGPIGTLNYEPNSSKHLGIVAGGSGITPVLQILNEIITV 202          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_PICGU (NADH-cytochrome b5 reductase 2 OS=Pichia guilliermondii GN=MCR1 PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.950e-22
Identity = 60/138 (43.48%), Postives = 79/138 (57.25%), Query Frame = 3
Query:  264 DKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            D+WI  KL+ +  VS N+  F F    P    GL  ASC++T+      A+GN   V+RPYTP+SD + KG  D +IK Y  GKMS HF  LK GD V  KGPI K ++ PN  + I +I G    TP+ Q++  I K
Sbjct:   45 DEWIDLKLKKSWDVSSNTRHFVFELKSPEDVSGLVTASCLMTKFVT---AKGNN--VIRPYTPVSDVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSFKGPIVKWKWEPNQFQSIALIGGGTGITPLYQLLHEITK 177          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1A_VANPO (NADH-cytochrome b5 reductase 2-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=MCR1A PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21
Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 3
Query:  246 KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            K+ +  + WI   +     +SH++  F F +     + GL VAS +LT+   P G +       V+RPYTP+SD + KG  DL+IK YP+GKM+ H  SLK  D +  KGPI K ++ PN  + I +I G    TP+ Q+I AI K
Sbjct:   41 KVFIGDNNWIDLPISRIEEISHDTKRFTFKYPSQDSVSGLVVASALLTKFVTPKGSN-------VIRPYTPVSDVDEKGSLDLVIKHYPDGKMTNHIFSLKVNDTLSFKGPIPKWKWVPNSFESITLIGGGTGITPLYQLIHAITK 179          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_EMENI (NADH-cytochrome b5 reductase 2 OS=Emericella nidulans GN=mcr1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21
Identity = 58/158 (36.71%), Postives = 85/158 (53.80%), Query Frame = 3
Query:  243 PKIALNPDK-WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            PK+    D+ W+  KL D   +SHN+   RF F D  A  GL +AS +LT+          +K V+RPYTP SD +  G+ +L++K YP G MS+H  ++     ++ KGP+ K  +  N  KHI ++AG    TPM Q+   I K     + VT V+
Sbjct:   63 PKVFTGGDQGWVNLKLSDIEILSHNTKRLRFEFPDKEAVSGLHIASALLTK----YSPPDGSKPVIRPYTPTSDEDQPGYLELVVKRYPNGPMSEHLHNMNVDQRLDFKGPLPKYPWEANKHKHICLVAGGTGITPMYQLAREIFKNPEDKTKVTLVF 216          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_DEBHA (NADH-cytochrome b5 reductase 2 OS=Debaryomyces hansenii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21
Identity = 65/176 (36.93%), Postives = 91/176 (51.70%), Query Frame = 3
Query:  156 AAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            AA  G V     +S+ ++++      ETG     N D+WI  KL  +   +HN+  F F       + GL  ASC+LT+   P G +       V+RPYTPISD + KG  + +IK Y  GKMS H   LKP D +  KGP+ K ++ PN  K I +I G    TP+ Q++  I K
Sbjct:   21 AAAVGSVGIAYQYSTSSIMN------ETGKTFTGN-DEWIDLKLAKSWDTTHNTKHFVFELANQDDVSGLINASCLLTKFVTPKGNN-------VIRPYTPISDVDGKGSIEFVIKKYDGGKMSSHIHDLKPNDTLAFKGPVVKWKWEPNQYKSIALIGGGTGITPLYQLMHEITK 182          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_CANAL (NADH-cytochrome b5 reductase 2 OS=Candida albicans GN=MCR1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21
Identity = 67/197 (34.01%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  129 KFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNS-HLFRFSFDPSAKLGLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            KF  PF    A++ G++    +S+ N    + I  ETG K   + ++W+  KL  +  ++HN+ HL     D +   GL  ASC+LT+   P G +       V+RPYTP+SD    G  D +IK Y  GKMS H   LK G+ +  KGPI K ++ PN  K I +I G    TP+ Q++  I      ++ V  ++
Sbjct:   13 KFLVPFAGATALSIGLALQ--YSTSN----NYIANETG-KTFTDSNEWVDLKLSKSIDLTHNTKHLVFKLKDENDVSGLITASCLLTKFVTPKGNN-------VIRPYTPVSDVNQSGEIDFVIKKYDGGKMSSHIFDLKEGETLSFKGPIVKWKWEPNQFKSIALIGGGTGITPLYQLLHQITSNPKDNTKVNLIY 195          
The following BLAST results are available for this feature:
BLAST of FC931260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
MCR1_ASPOR1.324e-2239.60NADH-cytochrome b5 reductase 2 OS=Aspergillus oryz... [more]
NCB5R_CRYNE1.729e-2241.84NADH-cytochrome b5 reductase 1 OS=Cryptococcus neo... [more]
MCR1_NEUCR1.729e-2234.56NADH-cytochrome b5 reductase 2 OS=Neurospora crass... [more]
MCR1_ASPTN2.258e-2237.57NADH-cytochrome b5 reductase 2 OS=Aspergillus terr... [more]
YMM5_YEAST2.950e-2237.06Uncharacterized oxidoreductase YML125C OS=Saccharo... [more]
MCR1_PICGU2.950e-2243.48NADH-cytochrome b5 reductase 2 OS=Pichia guillierm... [more]
MCR1A_VANPO1.121e-2139.04NADH-cytochrome b5 reductase 2-A OS=Vanderwaltozym... [more]
MCR1_EMENI1.912e-2136.71NADH-cytochrome b5 reductase 2 OS=Emericella nidul... [more]
MCR1_DEBHA1.912e-2136.93NADH-cytochrome b5 reductase 2 OS=Debaryomyces han... [more]
MCR1_CANAL1.912e-2134.01NADH-cytochrome b5 reductase 2 OS=Candida albicans... [more]

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Properties
Property NameValue
Genbank descriptionC34103C03EF PostHarvP1 Citrus clementina cDNA clone C34103C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931260 ID=FC931260; Name=FC931260; organism=Citrus clementina; type=EST; length=727bp
GACTTTTCTTTGCTTTGCTTCTTCTCCAACATTAGAAAATGGCTACGACC
TTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCATT
TGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGAG
CAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATCC
CCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAAT
TGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCAA
GGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGCC
AAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAGG
ACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCTA
TATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTAT
CCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATGT
AGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATGA
AGAAACACATCGGCATGATAGCTGGGTGGCACAGGTATACTCCTATGCTT
CAGGTAATTGAGGCTATACTGAAGATCCAGATGACACACTCAGGTGTCAC
TGCTGTATGGCATATATCCCAGATGAT
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