FC931260

Overview
NameFC931260
Unique NameFC931260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9476 contig Ccv1_Contig9476:14..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_BOTFB (NADH-cytochrome b5 reductase 2 OS=Botryotinia fuckeliana (strain B05.10) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 70/210 (33.33%), Postives = 98/210 (46.67%), Query Frame = 3
Query:  144 FGAIAAVAGGVSYYCYFSSPNLVHLDQI--NEETGPKIALNPDK------------------WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            +  +AA AG  +YY      N   +     + E   K A+   K                  +I  KL     ++HN+  FRF    S ++ GL VAS +LT+   G + +   K  +RPYTP SD   +G  DLL+K YP G MS+H   + PG  ++ KGPI K  +S N   HI +IAG    TPM Q+  AI       + VT V+
Sbjct:   35 YAGLAAAAGAGAYYFLNQGDNAAKVKDAAKDAEAKAKEAVGQGKSKVEGAVGKAAFTGGDQGFISLKLDSVENINHNTKKFRFELPESDQVSGLQVASALLTKFK-GPEMQ---KPAIRPYTPTSDESEQGFIDLLVKKYPNGVMSEHMHDMVPGQRLDFKGPIPKYPWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLVF 240          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_LODEL (NADH-cytochrome b5 reductase 2 OS=Lodderomyces elongisporus GN=MCR1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21
Identity = 63/185 (34.05%), Postives = 94/185 (50.81%), Query Frame = 3
Query:  123 FNKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNS-HLFRFSFDPSAKLGLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAI 668
            F+  +F +  + A  G +    Y +         I  ETG K     D+WI  KL+ +  ++HN+ HL     +P    GL  AS ++T+   P G +       V+RPYTP+SD + KG  D +IK Y  GKMS H  +LK G+ +  KGP+ K ++ PN  K I +I G    TP+ Q++  I
Sbjct:    7 FSNPKFVYPLVGATIGSIGLAYYSTQAQFY----IANETG-KTFTGGDQWIDLKLKKSEDLTHNTKHLTFELLNPDDVSGLITASMLMTKYVTPKGNN-------VIRPYTPVSDPDQKGTLDFVIKRYENGKMSNHIHNLKEGETLSFKGPVVKWKWEPNQFKSIALIGGGTGITPLYQLLREI 179          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_AJECN (NADH-cytochrome b5 reductase 2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=MCR1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.489e-21
Identity = 66/196 (33.67%), Postives = 93/196 (47.45%), Query Frame = 3
Query:  135 RFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDT---EAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            R P      +A G  YY Y+ + +        +E           WIG KL     V+HN    RF F DP +  GL +AS +LT+     D     K  +RPYTP+SD     + G+ DLL+K YP G MS H  ++  G  ++ KGP+ K  + P+   HI +IAG    TPM Q++  I       + VT V+
Sbjct:   30 RIPLIGGITLAAGAGYYYYWQTTSA---KSEPKERSTVFKGGDQGWIGLKLAHIDNVNHNVKKLRFEFEDPESVSGLHIASALLTKYKGLTDE----KPTIRPYTPVSDEGMWASLGYLDLLVKRYPNGPMSNHLHNMAVGQRLDFKGPLPKYPWEPSKHDHICLIAGGTGITPMYQLVRKIFSNPEDKTKVTLVF 218          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_PHANO (NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria nodorum GN=MCR1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20
Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 3
Query:  270 WIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            +I   L  +  V+HN+    F   +P  + GL V S ++T+   G + E   K V+RPYTP+SD + +G  D ++K Y +G MS H  +++PG  +++KGPI K  +SPN  +HI +IAG    TPM Q   AI K     + VT V+
Sbjct:   86 FISLLLDKSEVVNHNTKKLTFKLPEPDMESGLPVTSAVITKYK-GPEME---KPVIRPYTPVSDVDQQGTVDFIVKKYEKGPMSSHMHNMEPGQRLDIKGPIPKYPWSPNKHEHIALIAGGTGITPMWQTARAIFKNPEDKTKVTLVF 229          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_SCLS1 (NADH-cytochrome b5 reductase 2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20
Identity = 59/148 (39.86%), Postives = 80/148 (54.05%), Query Frame = 3
Query:  270 WIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            +I  KL     V+HN+  FRF    S ++ GL V S ++T+   G + +   K  +RPYTP SD   KG  DLL+K YP G MS+H   + PG  ++ KGPI K  +S N   HI +IAG    TPM Q+  AI       + VT V+
Sbjct:   96 FISLKLDSVELVNHNTKKFRFELPESDQVSGLHVTSALITKYK-GPEMQ---KPAIRPYTPTSDEGEKGFIDLLVKKYPNGVMSEHMHEMVPGQRLDFKGPIPKYAWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLVF 239          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_PICST (NADH-cytochrome b5 reductase 2 OS=Pichia stipitis GN=MCR1 PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20
Identity = 67/186 (36.02%), Postives = 94/186 (50.54%), Query Frame = 3
Query:  126 NKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            +KF  P   +AA A G++ Y + SS  +      NE +  K     D+WI  KL  +  +SH++    F       + GL  AS ++T+   P G +       V+RPYTP+SDTE  G  D ++K Y  GKMS H   LKP D +  KGP  K ++ PN  K I +I G    TP+ Q+I  I K
Sbjct:   13 SKFVLP---VAAAAVGLASYSFTSSSFIA-----NEPS--KAFKGGDEWIDLKLISSHDLSHDTKHLVFELPNKDDVSGLVTASLLMTKFVTPKGSN-------VIRPYTPVSDTEQAGTIDFVVKKYEGGKMSSHIHDLKPNDTLSFKGPFVKWKWEPNQFKSIALIGGGTGITPLYQLIHEITK 181          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_KLULA (NADH-cytochrome b5 reductase 1 OS=Kluyveromyces lactis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.150e-20
Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 3
Query:  246 KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILKIQMTHSGVTAVW 710
            K  L+ +K   F L     ++HN+ ++RF    S + LGL +   I  +A +      N K ++R YTP S D++A GHF+LLIK Y +G +S+HFA L  GD ++V+GP     Y PNM + IGMIAG     PM Q++++I       + V+ V+
Sbjct:   31 KPVLDKEKLQEFPLVAKTVLTHNTAIYRFGLPKSTQVLGLPIGQHISVQANI------NGKDILRSYTPTSLDSDAVGHFELLIKSYEKGNISKHFAQLNIGDKIKVRGPKGFYHYQPNMNEEIGMIAGGTGIAPMYQIMKSIFANDSDKTKVSLVY 181          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_YEAST (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae GN=MCR1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 61/178 (34.27%), Postives = 88/178 (49.44%), Query Frame = 3
Query:  150 AIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPS-AKLGLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            A+  VA   +   YF++ N  H    NE    K+    DKWI   +      SH++  F F      +++GL +AS +  +   P G +       VVRPYTP+SD   KGHF L++K Y  GKM+ H   LKP D V  KGPI K ++ PN  K I ++       P+ Q+   I++
Sbjct:   16 ALGTVAIAAATAFYFANRNQ-HSFVFNESN--KVFKGDDKWIDLPISKIEEESHDTRRFTFKLPTEDSEMGLVLASALFAKFVTPKGSN-------VVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVE 183          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_YEAS7 (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=MCR1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20
Identity = 61/178 (34.27%), Postives = 88/178 (49.44%), Query Frame = 3
Query:  150 AIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPS-AKLGLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            A+  VA   +   YF++ N  H    NE    K+    DKWI   +      SH++  F F      +++GL +AS +  +   P G +       VVRPYTP+SD   KGHF L++K Y  GKM+ H   LKP D V  KGPI K ++ PN  K I ++       P+ Q+   I++
Sbjct:   16 ALGTVAIAAATAFYFANRNQ-HSFVFNESN--KVFKGDDKWIDLPISKIEEESHDTRRFTFKLPTEDSEMGLVLASALFAKFVTPKGSN-------VVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVE 183          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_SCHPO (NADH-cytochrome b5 reductase 1 OS=Schizosaccharomyces pombe GN=cbr1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 60/144 (41.67%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  264 DKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQ------DAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAIL 671
            DK   F+L D A ++HN+ ++RF   P A   LGL          P+GQ      D +G  K   R YTP+S    KG+FDLL+K YP GK+S+ F+ LK GD + V+GP    ++   + +H GMIAG    TPMLQ+I A+L
Sbjct:   59 DKIQQFELSDKAVLNHNTAIYRFRL-PRANDVLGL----------PIGQHLKVFVDVDG--KEYSRSYTPLSSDADKGYFDLLVKSYPNGKVSKKFSELKIGDTIGVRGPKGNWKHRTGLARHFGMIAGGTGITPMLQIIRAVL 189          
The following BLAST results are available for this feature:
BLAST of FC931260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
MCR1_BOTFB3.261e-2133.33NADH-cytochrome b5 reductase 2 OS=Botryotinia fuck... [more]
MCR1_LODEL5.563e-2134.05NADH-cytochrome b5 reductase 2 OS=Lodderomyces elo... [more]
MCR1_AJECN9.489e-2133.67NADH-cytochrome b5 reductase 2 OS=Ajellomyces caps... [more]
MCR1_PHANO1.239e-2037.84NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria no... [more]
MCR1_SCLS11.619e-2039.86NADH-cytochrome b5 reductase 2 OS=Sclerotinia scle... [more]
MCR1_PICST3.606e-2036.02NADH-cytochrome b5 reductase 2 OS=Pichia stipitis ... [more]
NCB5R_KLULA6.150e-2037.58NADH-cytochrome b5 reductase 1 OS=Kluyveromyces la... [more]
MCR1_YEAST8.033e-2034.27NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
MCR1_YEAS78.033e-2034.27NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
NCB5R_SCHPO1.370e-1941.67NADH-cytochrome b5 reductase 1 OS=Schizosaccharomy... [more]

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Properties
Property NameValue
Genbank descriptionC34103C03EF PostHarvP1 Citrus clementina cDNA clone C34103C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931260 ID=FC931260; Name=FC931260; organism=Citrus clementina; type=EST; length=727bp
GACTTTTCTTTGCTTTGCTTCTTCTCCAACATTAGAAAATGGCTACGACC
TTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCATT
TGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGAG
CAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATCC
CCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAAT
TGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCAA
GGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGCC
AAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAGG
ACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCTA
TATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTAT
CCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATGT
AGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATGA
AGAAACACATCGGCATGATAGCTGGGTGGCACAGGTATACTCCTATGCTT
CAGGTAATTGAGGCTATACTGAAGATCCAGATGACACACTCAGGTGTCAC
TGCTGTATGGCATATATCCCAGATGAT
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