FC931260

Overview
NameFC931260
Unique NameFC931260
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9476 contig Ccv1_Contig9476:14..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAST (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae GN=CBR1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 3
Query:  225 INEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAI 668
            I  +T P +    + +  F L +   ++HN+ +++F   P A   LGL +   I+ +A +      N K + R YTP S D + KG+F+LL+K YP G +S+    LK GD +++KGP     Y  N + H+GMIAG     PM Q+++AI
Sbjct:   25 IGPKTKPVLDPKRNDFQSFPLVEKTILTHNTSMYKFGL-PHADDVLGLPIGQHIVIKANI------NGKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAI 168          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAS7 (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=CBR1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 3
Query:  225 INEETGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAI 668
            I  +T P +    + +  F L +   ++HN+ +++F   P A   LGL +   I+ +A +      N K + R YTP S D + KG+F+LL+K YP G +S+    LK GD +++KGP     Y  N + H+GMIAG     PM Q+++AI
Sbjct:   25 IGPKTKPVLDPKRNDFQSFPLVEKTILTHNTSMYKFGL-PHADDVLGLPIGQHIVIKANI------NGKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAI 168          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NCB5R_ASHGO (NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 3
Query:  246 KIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPIS-DTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAI 668
            K  LN D W  F L     ++HN+ ++RF   +  A LGL +   I     +      + K ++R YTP S D++A G+F+LL+K Y +G +S+  A L  GD ++V+GP     Y PNM K IGMIAG    +PM Q+I AI
Sbjct:   36 KTTLNKD-WQEFSLLTKTVLTHNTAIYRFGLPEADAVLGLPIGQHISISGVI------DGKEMLRSYTPTSLDSDATGYFELLVKSYEKGNISKMLAELAIGDRIKVRGPKGFYHYEPNMYKEIGMIAGGTGISPMYQIIRAI 171          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: MCR1_ASHGO (NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 63/183 (34.43%), Postives = 86/183 (46.99%), Query Frame = 3
Query:  138 FPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIA---LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTR--APLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGWHRYTPMLQVIEAI 668
            F  G  A  A G  Y    S  NL       + TG   A       +W   K+    +VSH++  F F+      + GL  AS +L +   P G +       V+RPYTP+SD  A+G F L+IK Y  GK + H   LK  D VE KGPI+K R+ PNM   I ++      TP+ Q++  I
Sbjct:   14 FALGTTAVAAAGYLYAQ--SRGNLSTSLNKGDVTGQAAAQTFTGDGQWHALKIAKIEQVSHDTRRFTFALPSQDHVTGLTTASALLAKYVTPKGSN-------VIRPYTPVSDNMARGMFQLVIKHYDGGKFTTHLFGLKENDTVEFKGPIQKWRWDPNMFDSIVLMGAGTGITPLFQMMHHI 187          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R3_HUMAN (NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=CYB5R3 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 71/186 (38.17%), Postives = 94/186 (50.54%), Query Frame = 3
Query:  216 LDQINEETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGWHRYTPMLQVIEAILKIQMTHS 692
            L ++ + + P I L +PD     +L D   +SH++  FRF+   P   LGL V   I   A +    +GN   VVRPYTPIS  + KG  DL+IKVY           GKMSQ+  S++ GD +E +GP   L Y         P+ K        K +GMIAG    TPMLQVI AI+K    H+
Sbjct:   23 LMKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARI----DGNL--VVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHT 202          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R2_XENLA (NADH-cytochrome b5 reductase 2 OS=Xenopus laevis GN=cyb5r2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.458e-17
Identity = 64/169 (37.87%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  243 PKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK--LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY--------------SPNMK--KHIGMIAGWHRYTPMLQVIEAI 668
            P   L+P+      L +   +SH++  FRF   PSA+  LGL V   I   A +      N   VVR YTP+S  E KGH DL++KVY +         GKMSQH  SLK G+ ++ +GP   L Y               P +K  KH+GM+AG    TPMLQ+I  I
Sbjct:   28 PVTLLDPNAKYPLPLIEKQEISHDTKKFRFGL-PSAEHVLGLPVGQHIYLSAKV------NGSLVVRAYTPVSSDEVKGHVDLVVKVYYKNVNPKFPDGGKMSQHLDSLKIGETIDFRGPNGLLVYKGKGKFAIRPDKKAEPKIKVAKHVGMLAGGTGITPMLQLIRQI 189          

HSP 2 Score: 21.1718 bits (43), Expect = 6.458e-17
Identity = 7/20 (35.00%), Postives = 12/20 (60.00%), Query Frame = 2
Query:  668 TEDPDDTLRCHCCMAYIPDD 727
            T+DP+D  +C+   A   +D
Sbjct:  190 TQDPNDNTKCYLIFANQTED 209          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R3_MACFA (NADH-cytochrome b5 reductase 3 OS=Macaca fascicularis GN=CYB5R3 PE=2 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 8.312e-17
Identity = 68/177 (38.42%), Postives = 89/177 (50.28%), Query Frame = 3
Query:  243 PKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGWHRYTPMLQVIEAILKIQMTHS 692
            P I L +PD     +L D   +SH++  FRF+   P   LGL V   I   A +    +GN   V+RPYTP+S  + KG  DL+IKVY           GKMSQ+  S++ GD +E +GP   L Y         P+ K        K +GMIAG    TPMLQVI AI+K    H+
Sbjct:   32 PAITLESPDIKYSLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARI----DGNL--VIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSNPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHT 202          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R3_CANFA (NADH-cytochrome b5 reductase 3 OS=Canis familiaris GN=CYB5R3 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.312e-17
Identity = 68/180 (37.78%), Postives = 92/180 (51.11%), Query Frame = 3
Query:  216 LDQINEETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGWHRYTPMLQVIEAILK 674
            L ++ + + P I L +PD     +L D   ++H++  FRF+   P   LGL V   I   A +    +GN   V+RPYTP+S  + KG  DL+IKVY           GKMSQ+  S+K GD +E +GP   L Y         P+ K        K +GMIAG    TPMLQVI AI+K
Sbjct:   23 LMKLFQRSTPAITLESPDIKYPLRLIDKEVINHDTRRFRFALPSPQHILGLPVGQHIYLSARI----DGNL--VIRPYTPVSSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMKIGDTIEFRGPNGLLVYQGKGKFAIRPDKKSNPIIKTVKSVGMIAGGTGITPMLQVIRAIIK 196          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NIA1_PHAVU (Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris GN=NIA1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16
Identity = 63/182 (34.62%), Postives = 90/182 (49.45%), Query Frame = 3
Query:  195 SSPNLVHLDQINEETGP--KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGWHRYTPMLQVIEAILK 674
            SS N VH +       P  ++ALNP + I  KL     +SH+  L RF+     + +GL V + +   A + +      K  +R YTP S  +  G FDL++KVY +G          MSQH  SL  G VV+VKGP+  + Y+          P   K + M+AG    TP+ QV++AILK
Sbjct:  600 SSNNSVHGNSETTHLAPIREVALNPREKIPCKLLSKTSISHDVRLLRFALPAEDQVMGLPVGNHVFLCATVDE------KLCMRAYTPTSSVDEVGFFDLVVKVYFKGVHPNFPNGGIMSQHLDSLPIGSVVDVKGPLGHIEYTGRGNFLVHGKPRFAKRLTMLAGGTGITPIYQVVQAILK 775          
BLAST of FC931260 vs. ExPASy Swiss-Prot
Match: NB5R3_RAT (NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus GN=Cyb5r3 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16
Identity = 65/181 (35.91%), Postives = 87/181 (48.07%), Query Frame = 3
Query:  231 EETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY---------PEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMK----------------KHIGMIAGWHRYTPMLQVIEAILKIQMTHS 692
            + + P I L NPD     +L D   +SH++  FRF+   P   LGL +   I     L    +GN   V+RPYTP+S  + KG  DL++KVY           GKMSQ+  ++  GD +E +GP   L Y    K                K +GMIAG    TPMLQVI A+LK    H+
Sbjct:   28 QRSSPAITLENPDIKYPLRLIDKEIISHDTRRFRFALPSPQHILGLPIGQHIY----LSTRIDGNL--VIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMNIGDTIEFRGPNGLLVYQGKGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHT 202          
The following BLAST results are available for this feature:
BLAST of FC931260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
NCB5R_YEAST2.187e-1735.10NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
NCB5R_YEAS72.187e-1735.10NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
NCB5R_ASHGO2.187e-1739.16NADH-cytochrome b5 reductase 1 OS=Ashbya gossypii ... [more]
MCR1_ASHGO2.187e-1734.43NADH-cytochrome b5 reductase 2 OS=Ashbya gossypii ... [more]
NB5R3_HUMAN3.731e-1738.17NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=... [more]
NB5R2_XENLA6.458e-1737.87NADH-cytochrome b5 reductase 2 OS=Xenopus laevis G... [more]
NB5R3_MACFA8.312e-1738.42NADH-cytochrome b5 reductase 3 OS=Macaca fascicula... [more]
NB5R3_CANFA8.312e-1737.78NADH-cytochrome b5 reductase 3 OS=Canis familiaris... [more]
NIA1_PHAVU1.086e-1634.62Nitrate reductase [NADH] 1 OS=Phaseolus vulgaris G... [more]
NB5R3_RAT1.086e-1635.91NADH-cytochrome b5 reductase 3 OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionC34103C03EF PostHarvP1 Citrus clementina cDNA clone C34103C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931260 ID=FC931260; Name=FC931260; organism=Citrus clementina; type=EST; length=727bp
GACTTTTCTTTGCTTTGCTTCTTCTCCAACATTAGAAAATGGCTACGACC
TTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCATT
TGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGAG
CAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATCC
CCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAAT
TGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCAA
GGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGCC
AAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAGG
ACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCTA
TATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTAT
CCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATGT
AGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATGA
AGAAACACATCGGCATGATAGCTGGGTGGCACAGGTATACTCCTATGCTT
CAGGTAATTGAGGCTATACTGAAGATCCAGATGACACACTCAGGTGTCAC
TGCTGTATGGCATATATCCCAGATGAT
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